RNA–Protein interactions for RNA: ENST00000471909.1

RRP1-202, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 2,544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-202ENST00000471909 CSAG1Q6PB30 78 aa9.35□□□□□ -0.91
RRP1-202ENST00000471909 EPPK1P58107 5090 aaKnown RBP9.31□□□□□ -0.92
RRP1-202ENST00000471909 MYCBP2O75592 4640 aa9.29□□□□□ -0.92
RRP1-202ENST00000471909 DMBT1Q9UGM3 2413 aaPredicted RBP9.27□□□□□ -0.92
RRP1-202ENST00000471909 MT1HL1P0DM35 61 aa9.24□□□□□ -0.93
RRP1-202ENST00000471909 H0YAA0 97 aa9.24□□□□□ -0.93
RRP1-202ENST00000471909 A0A1B0GU33 70 aa9.16□□□□□ -0.94
RRP1-202ENST00000471909 KRTAP3-1Q9BYR8 98 aa9.14□□□□□ -0.95
RRP1-202ENST00000471909 H1FX-AS1Q4G0G2 97 aa9.12□□□□□ -0.95
RRP1-202ENST00000471909 XP32Q5T750 250 aa9.12□□□□□ -0.95
RRP1-202ENST00000471909 RPL37P61927 97 aaKnown RBP9.11□□□□□ -0.95
RRP1-202ENST00000471909 KRTAP25-1Q3LHN0 102 aa9.06□□□□□ -0.96
RRP1-202ENST00000471909 KRTAP4-5Q9BYR2 181 aa9.05□□□□□ -0.96
RRP1-202ENST00000471909 COX6B2Q6YFQ2 88 aa9.02□□□□□ -0.96
RRP1-202ENST00000471909 ROMO1P60602 79 aa9.01□□□□□ -0.97
RRP1-202ENST00000471909 K7ERS5 55 aa8.98□□□□□ -0.97
RRP1-202ENST00000471909 ABCA13Q86UQ4 5058 aa8.93□□□□□ -0.98
RRP1-202ENST00000471909 TPRXLQ17RH7 258 aa8.92□□□□□ -0.98
RRP1-202ENST00000471909 LRP2P98164 4655 aa8.88□□□□□ -0.99
RRP1-202ENST00000471909 LPAP08519 4548 aa8.86□□□□□ -0.99
RRP1-202ENST00000471909 CRIPTQ9P021 101 aa8.86□□□□□ -0.99
RRP1-202ENST00000471909 KRTAP3-3Q9BYR6 98 aa8.78□□□□□ -1
RRP1-202ENST00000471909 HERC2O95714 4834 aa8.76□□□□□ -1.01
RRP1-202ENST00000471909 P0C880 135 aa8.75□□□□□ -1.01
RRP1-202ENST00000471909 KRTAP10-6P60371 365 aaPredicted RBP8.74□□□□□ -1.01
RRP1-202ENST00000471909 S4R3F8 94 aa8.72□□□□□ -1.01
RRP1-202ENST00000471909 J3QL48 77 aa8.71□□□□□ -1.02
RRP1-202ENST00000471909 A0A0D9SG42 100 aa8.7□□□□□ -1.02
RRP1-202ENST00000471909 KRTAP13-4Q3LI77 160 aa8.7□□□□□ -1.02
RRP1-202ENST00000471909 BIRC6Q9NR09 4857 aa8.68□□□□□ -1.02
RRP1-202ENST00000471909 KRTAP3-2Q9BYR7 98 aa8.65□□□□□ -1.02
RRP1-202ENST00000471909 A0A0A0MQY5 61 aa8.59□□□□□ -1.03
RRP1-202ENST00000471909 SEC61BP60468 96 aaKnown RBP8.57□□□□□ -1.04
RRP1-202ENST00000471909 SPINT4Q6UDR6 99 aa8.53□□□□□ -1.04
RRP1-202ENST00000471909 MUC17Q685J3 4493 aa8.52□□□□□ -1.05
RRP1-202ENST00000471909 KRTAP4-1Q9BYQ7 146 aa8.5□□□□□ -1.05
RRP1-202ENST00000471909 C10orf95Q9H7T3 257 aa8.49□□□□□ -1.05
RRP1-202ENST00000471909 KRTAP12-2P59991 146 aa8.45□□□□□ -1.06
RRP1-202ENST00000471909 NDUFAF8A1L188 74 aa8.43□□□□□ -1.06
RRP1-202ENST00000471909 PCLOQ9Y6V0 5065 aa8.4□□□□□ -1.06
RRP1-202ENST00000471909 KRTAP12-1P59990 96 aa8.37□□□□□ -1.07
RRP1-202ENST00000471909 HERC1Q15751 4861 aa8.36□□□□□ -1.07
RRP1-202ENST00000471909 KRTAP19-2Q3LHN2 52 aa8.32□□□□□ -1.08
RRP1-202ENST00000471909 KRTAP15-1Q3LI76 137 aa8.32□□□□□ -1.08
RRP1-202ENST00000471909 MUC2Q02817 5179 aa8.31□□□□□ -1.08
RRP1-202ENST00000471909 M0QZ58 72 aa8.29□□□□□ -1.08
RRP1-202ENST00000471909 HMCN2Q8NDA2 5059 aa8.28□□□□□ -1.08
RRP1-202ENST00000471909 FLGP20930 4061 aaPredicted RBP8.11□□□□□ -1.11
RRP1-202ENST00000471909 LORP23490 312 aaPredicted RBP8.07□□□□□ -1.12
RRP1-202ENST00000471909 R4GN34 69 aa8.06□□□□□ -1.12
RRP1-202ENST00000471909 LUZP6Q538Z0 58 aa8.05□□□□□ -1.12
RRP1-202ENST00000471909 LCE2CQ5TA81 110 aa7.95□□□□□ -1.14
RRP1-202ENST00000471909 UBR4Q5T4S7 5183 aa7.93□□□□□ -1.14
RRP1-202ENST00000471909 FAT4Q6V0I7 4981 aa7.91□□□□□ -1.14
RRP1-202ENST00000471909 RNF213Q63HN8 5207 aa7.89□□□□□ -1.15
RRP1-202ENST00000471909 PLAC4Q8WY50 150 aa7.85□□□□□ -1.15
RRP1-202ENST00000471909 MT1HP80294 61 aa7.75□□□□□ -1.17
RRP1-202ENST00000471909 M0R2T5 61 aa7.7□□□□□ -1.18
RRP1-202ENST00000471909 PP632Q6XCG6 107 aa7.69□□□□□ -1.18
RRP1-202ENST00000471909 CAMK2N1Q7Z7J9 78 aa7.68□□□□□ -1.18
RRP1-202ENST00000471909 SPRR2GQ9BYE4 73 aa7.56□□□□□ -1.2
RRP1-202ENST00000471909 KRTAP19-1Q8IUB9 90 aa7.55□□□□□ -1.2
RRP1-202ENST00000471909 MT2AP02795 61 aa7.54□□□□□ -1.2
RRP1-202ENST00000471909 MT1FP04733 61 aa7.53□□□□□ -1.2
RRP1-202ENST00000471909 KRTAP9-8Q9BYQ0 159 aa7.53□□□□□ -1.2
RRP1-202ENST00000471909 KRTAP10-10P60014 251 aa7.49□□□□□ -1.21
RRP1-202ENST00000471909 TNP1P09430 55 aa7.41□□□□□ -1.22
RRP1-202ENST00000471909 KRTAP23-1A1A580 65 aa7.34□□□□□ -1.23
RRP1-202ENST00000471909 KRTAP19-8Q3LI54 63 aa7.29□□□□□ -1.24
RRP1-202ENST00000471909 SPRR5A0A1B0GTR4 108 aa7.25□□□□□ -1.25
RRP1-202ENST00000471909 KRTAP9-3Q9BYQ3 159 aa7.23□□□□□ -1.25
RRP1-202ENST00000471909 MT1BP07438 61 aa7.21□□□□□ -1.26
RRP1-202ENST00000471909 LCE2AQ5TA79 106 aaPredicted RBP7.12□□□□□ -1.27
RRP1-202ENST00000471909 KRTAP10-5P60370 271 aa7.08□□□□□ -1.28
RRP1-202ENST00000471909 MT1XP80297 61 aa7.07□□□□□ -1.28
RRP1-202ENST00000471909 PRO2289Q9P1D8 64 aa7.03□□□□□ -1.28
RRP1-202ENST00000471909 LCE2BO14633 110 aa6.99□□□□□ -1.29
RRP1-202ENST00000471909 LCE3AQ5TA76 89 aa6.97□□□□□ -1.29
RRP1-202ENST00000471909 USH2AO75445 5202 aa6.87□□□□□ -1.31
RRP1-202ENST00000471909 KRTAP10-7P60409 375 aaPredicted RBP6.84□□□□□ -1.31
RRP1-202ENST00000471909 KRTAP10-12P60413 245 aa6.81□□□□□ -1.32
RRP1-202ENST00000471909 KRTAP8-1Q8IUC2 63 aa6.8□□□□□ -1.32
RRP1-202ENST00000471909 INE1O15225 51 aa6.76□□□□□ -1.33
RRP1-202ENST00000471909 KRTAP12-3P60328 96 aa6.65□□□□□ -1.35
RRP1-202ENST00000471909 KMT2DO14686 5537 aa6.56□□□□□ -1.36
RRP1-202ENST00000471909 KRTAP4-8A0A0G2JLE6 195 aa6.5□□□□□ -1.37
RRP1-202ENST00000471909 KRTAP4-8Q9BYQ9 185 aa6.5□□□□□ -1.37
RRP1-202ENST00000471909 KRTAP19-5Q3LI72 72 aa6.49□□□□□ -1.37
RRP1-202ENST00000471909 SSPOA2VEC9 5147 aa6.49□□□□□ -1.37
RRP1-202ENST00000471909 FSIP2Q5CZC0 6907 aa6.41□□□□□ -1.38
RRP1-202ENST00000471909 KRTAP19-6Q3LI70 58 aa6.39□□□□□ -1.39
RRP1-202ENST00000471909 KRTAP19-7Q3SYF9 63 aa6.31□□□□□ -1.4
RRP1-202ENST00000471909 LCE3CQ5T5A8 94 aa6.25□□□□□ -1.41
RRP1-202ENST00000471909 LCE2DQ5TA82 110 aaPredicted RBP6.25□□□□□ -1.41
RRP1-202ENST00000471909 MT1EP04732 61 aa6.15□□□□□ -1.42
RRP1-202ENST00000471909 FCGBPQ9Y6R7 5405 aaPredicted RBP6.14□□□□□ -1.43
RRP1-202ENST00000471909 MT1LQ93083 61 aa6.09□□□□□ -1.43
RRP1-202ENST00000471909 KRTAP4-7Q9BYR0 210 aa6.06□□□□□ -1.44
RRP1-202ENST00000471909 KRTAP9-6A8MVA2 160 aa6.03□□□□□ -1.44
RRP1-202ENST00000471909 KRTAP19-4Q3LI73 84 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms