RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 TPRXLQ17RH7 258 aa3.27□□□□□ -1.89
SMNDC1-204ENST00000471297 SPANXA2-OT1Q8N9U9 137 aa3.27□□□□□ -1.89
SMNDC1-204ENST00000471297 CYP4F30PQ9H0H9 118 aa3.27□□□□□ -1.89
SMNDC1-204ENST00000471297 KIAA1109Q2LD37 5005 aa3.27□□□□□ -1.89
SMNDC1-204ENST00000471297 FAT1Q14517 4588 aa3.26□□□□□ -1.89
SMNDC1-204ENST00000471297 FAM236DA0A1B0GTK5 79 aa3.26□□□□□ -1.89
SMNDC1-204ENST00000471297 FAM236CP0DP71 79 aa3.26□□□□□ -1.89
SMNDC1-204ENST00000471297 RPL37P61927 97 aaKnown RBP3.26□□□□□ -1.89
SMNDC1-204ENST00000471297 LCE1FQ5T754 118 aa3.26□□□□□ -1.89
SMNDC1-204ENST00000471297 ATP11AUNQ6ZP68 121 aa3.26□□□□□ -1.89
SMNDC1-204ENST00000471297 EPPK1P58107 5090 aaKnown RBP3.26□□□□□ -1.89
SMNDC1-204ENST00000471297 C7orf65Q6ZTY9 151 aa3.25□□□□□ -1.89
SMNDC1-204ENST00000471297 PCOTHQ58A44 107 aa3.24□□□□□ -1.89
SMNDC1-204ENST00000471297 DMBT1Q9UGM3 2413 aaPredicted RBP3.24□□□□□ -1.89
SMNDC1-204ENST00000471297 RPS28P62857 69 aaKnown RBP3.23□□□□□ -1.89
SMNDC1-204ENST00000471297 LCE1EQ5T753 118 aa3.23□□□□□ -1.89
SMNDC1-204ENST00000471297 SERP1Q9Y6X1 66 aa3.22□□□□□ -1.89
SMNDC1-204ENST00000471297 BIRC6Q9NR09 4857 aa3.21□□□□□ -1.89
SMNDC1-204ENST00000471297 HRES1P13985 223 aa3.21□□□□□ -1.9
SMNDC1-204ENST00000471297 SPINK7P58062 85 aa3.21□□□□□ -1.9
SMNDC1-204ENST00000471297 KRTAP10-12P60413 245 aa3.21□□□□□ -1.9
SMNDC1-204ENST00000471297 ACYP2P14621 99 aa3.19□□□□□ -1.9
SMNDC1-204ENST00000471297 LRP1Q07954 4544 aaKnown RBP3.18□□□□□ -1.9
SMNDC1-204ENST00000471297 TNXBP22105 4242 aa3.18□□□□□ -1.9
SMNDC1-204ENST00000471297 A8MUN3 132 aa3.17□□□□□ -1.9
SMNDC1-204ENST00000471297 DMAC1Q96GE9 116 aa3.17□□□□□ -1.9
SMNDC1-204ENST00000471297 FAT3Q8TDW7 4589 aa3.17□□□□□ -1.9
SMNDC1-204ENST00000471297 HERC2O95714 4834 aa3.16□□□□□ -1.9
SMNDC1-204ENST00000471297 KRTAP5-11Q6L8G4 156 aa3.15□□□□□ -1.91
SMNDC1-204ENST00000471297 C4orf26Q17RF5 130 aa3.14□□□□□ -1.91
SMNDC1-204ENST00000471297 COA5Q86WW8 74 aa3.14□□□□□ -1.91
SMNDC1-204ENST00000471297 SMIM26A0A096LP01 95 aa3.13□□□□□ -1.91
SMNDC1-204ENST00000471297 KRTAP10-5P60370 271 aa3.13□□□□□ -1.91
SMNDC1-204ENST00000471297 COX6B2Q6YFQ2 88 aa3.13□□□□□ -1.91
SMNDC1-204ENST00000471297 CHKB-CPT1BH3BT56 60 aa3.12□□□□□ -1.91
SMNDC1-204ENST00000471297 RBM12B-AS1Q9P1G2 102 aa3.11□□□□□ -1.91
SMNDC1-204ENST00000471297 MYCBP2O75592 4640 aa3.11□□□□□ -1.91
SMNDC1-204ENST00000471297 V9GYY9 64 aa3.1□□□□□ -1.91
SMNDC1-204ENST00000471297 ABCA13Q86UQ4 5058 aa3.09□□□□□ -1.91
SMNDC1-204ENST00000471297 SPTSSBQ8NFR3 76 aa3.09□□□□□ -1.91
SMNDC1-204ENST00000471297 Q1T7F1 81 aa3.07□□□□□ -1.92
SMNDC1-204ENST00000471297 H1FX-AS1Q4G0G2 97 aa3.07□□□□□ -1.92
SMNDC1-204ENST00000471297 LCE3CQ5T5A8 94 aa3.07□□□□□ -1.92
SMNDC1-204ENST00000471297 LINC01558Q9Y6Z2 57 aa3.05□□□□□ -1.92
SMNDC1-204ENST00000471297 KRTAP4-1Q9BYQ7 146 aa3.04□□□□□ -1.92
SMNDC1-204ENST00000471297 S4R3F8 94 aa3.04□□□□□ -1.92
SMNDC1-204ENST00000471297 SEC61GP60059 68 aa3□□□□□ -1.93
SMNDC1-204ENST00000471297 LCA10Q71F78 164 aa3□□□□□ -1.93
SMNDC1-204ENST00000471297 PRR15LQ9BU68 103 aa3□□□□□ -1.93
SMNDC1-204ENST00000471297 A0A1B0GU69 56 aa2.99□□□□□ -1.93
SMNDC1-204ENST00000471297 PSPHP1O15172 72 aa2.98□□□□□ -1.93
SMNDC1-204ENST00000471297 CSAG1Q6PB30 78 aa2.98□□□□□ -1.93
SMNDC1-204ENST00000471297 PCLOQ9Y6V0 5065 aa2.97□□□□□ -1.93
SMNDC1-204ENST00000471297 KRTAP19-2Q3LHN2 52 aa2.97□□□□□ -1.93
SMNDC1-204ENST00000471297 Q5VV11 94 aa2.96□□□□□ -1.94
SMNDC1-204ENST00000471297 LPAP08519 4548 aa2.94□□□□□ -1.94
SMNDC1-204ENST00000471297 KRTAP9-6A8MVA2 160 aa2.94□□□□□ -1.94
SMNDC1-204ENST00000471297 LRP2P98164 4655 aa2.94□□□□□ -1.94
SMNDC1-204ENST00000471297 H0YAA0 97 aa2.93□□□□□ -1.94
SMNDC1-204ENST00000471297 A6NED7 52 aa2.91□□□□□ -1.94
SMNDC1-204ENST00000471297 UQCR11O14957 56 aa2.91□□□□□ -1.94
SMNDC1-204ENST00000471297 MUC17Q685J3 4493 aa2.91□□□□□ -1.94
SMNDC1-204ENST00000471297 A0A1B0GU33 70 aa2.9□□□□□ -1.95
SMNDC1-204ENST00000471297 HERC1Q15751 4861 aa2.89□□□□□ -1.95
SMNDC1-204ENST00000471297 KRTAP5-9P26371 169 aa2.89□□□□□ -1.95
SMNDC1-204ENST00000471297 ADM2Q7Z4H4 148 aa2.89□□□□□ -1.95
SMNDC1-204ENST00000471297 HMCN2Q8NDA2 5059 aa2.87□□□□□ -1.95
SMNDC1-204ENST00000471297 A8MU10 97 aa2.87□□□□□ -1.95
SMNDC1-204ENST00000471297 MIR22HGQ0VDD5 57 aa2.87□□□□□ -1.95
SMNDC1-204ENST00000471297 SPATA8Q6RVD6 105 aa2.87□□□□□ -1.95
SMNDC1-204ENST00000471297 BRK1Q8WUW1 75 aa2.87□□□□□ -1.95
SMNDC1-204ENST00000471297 CDC42SE1Q9NRR8 79 aa2.87□□□□□ -1.95
SMNDC1-204ENST00000471297 P0C880 135 aa2.85□□□□□ -1.95
SMNDC1-204ENST00000471297 MT1HP80294 61 aa2.85□□□□□ -1.95
SMNDC1-204ENST00000471297 M0QZ58 72 aa2.84□□□□□ -1.95
SMNDC1-204ENST00000471297 M0R2T5 61 aa2.84□□□□□ -1.95
SMNDC1-204ENST00000471297 KRTAP5-1Q6L8H4 278 aa2.84□□□□□ -1.95
SMNDC1-204ENST00000471297 PRO0628Q9UI54 55 aa2.83□□□□□ -1.96
SMNDC1-204ENST00000471297 KRTAP5-4Q6L8H1 288 aa2.81□□□□□ -1.96
SMNDC1-204ENST00000471297 CRIPTQ9P021 101 aa2.81□□□□□ -1.96
SMNDC1-204ENST00000471297 R4GN34 69 aa2.8□□□□□ -1.96
SMNDC1-204ENST00000471297 LCE3EQ5T5B0 92 aa2.79□□□□□ -1.96
SMNDC1-204ENST00000471297 KRTAP13-4Q3LI77 160 aa2.78□□□□□ -1.96
SMNDC1-204ENST00000471297 KRTAP4-4Q9BYR3 166 aa2.78□□□□□ -1.96
SMNDC1-204ENST00000471297 K7ERS5 55 aa2.77□□□□□ -1.97
SMNDC1-204ENST00000471297 A0A0D9SG42 100 aa2.74□□□□□ -1.97
SMNDC1-204ENST00000471297 FLGP20930 4061 aaPredicted RBP2.74□□□□□ -1.97
SMNDC1-204ENST00000471297 RNF213Q63HN8 5207 aa2.73□□□□□ -1.97
SMNDC1-204ENST00000471297 UBR4Q5T4S7 5183 aa2.73□□□□□ -1.97
SMNDC1-204ENST00000471297 A6NN06 94 aa2.73□□□□□ -1.97
SMNDC1-204ENST00000471297 MT2AP02795 61 aa2.73□□□□□ -1.97
SMNDC1-204ENST00000471297 KRTAP12-2P59991 146 aa2.73□□□□□ -1.97
SMNDC1-204ENST00000471297 KRTAP10-10P60014 251 aa2.73□□□□□ -1.97
SMNDC1-204ENST00000471297 PMAIP1Q13794 54 aa2.73□□□□□ -1.97
SMNDC1-204ENST00000471297 MUC2Q02817 5179 aa2.72□□□□□ -1.97
SMNDC1-204ENST00000471297 MT1FP04733 61 aa2.71□□□□□ -1.98
SMNDC1-204ENST00000471297 LINC01554Q52M75 96 aa2.71□□□□□ -1.98
SMNDC1-204ENST00000471297 SPRR2GQ9BYE4 73 aa2.71□□□□□ -1.98
SMNDC1-204ENST00000471297 KRTAP12-1P59990 96 aa2.7□□□□□ -1.98
SMNDC1-204ENST00000471297 SPINT4Q6UDR6 99 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms