RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 S4R3F8 94 aa7.16□□□□□ -1.26
CDC42SE1-203ENST00000470278 MT2AP02795 61 aa7.14□□□□□ -1.27
CDC42SE1-203ENST00000470278 SERP2Q8N6R1 65 aa7.14□□□□□ -1.27
CDC42SE1-203ENST00000470278 LCA10Q71F78 164 aa7.12□□□□□ -1.27
CDC42SE1-203ENST00000470278 LCE2BO14633 110 aa7.09□□□□□ -1.27
CDC42SE1-203ENST00000470278 MT1FP04733 61 aa7.08□□□□□ -1.28
CDC42SE1-203ENST00000470278 CSAG1Q6PB30 78 aa7.07□□□□□ -1.28
CDC42SE1-203ENST00000470278 DMAC1Q96GE9 116 aa7.06□□□□□ -1.28
CDC42SE1-203ENST00000470278 KRTAP3-3Q9BYR6 98 aa7.06□□□□□ -1.28
CDC42SE1-203ENST00000470278 C20orf197Q8N268 126 aa7.04□□□□□ -1.28
CDC42SE1-203ENST00000470278 KRTAP19-1Q8IUB9 90 aa7.03□□□□□ -1.28
CDC42SE1-203ENST00000470278 SNURFQ9Y675 71 aa7.03□□□□□ -1.28
CDC42SE1-203ENST00000470278 KRTAP10-10P60014 251 aa7.02□□□□□ -1.29
CDC42SE1-203ENST00000470278 KRTAP9-3Q9BYQ3 159 aa7.02□□□□□ -1.29
CDC42SE1-203ENST00000470278 MACF1Q9UPN3 7388 aaKnown RBP7.01□□□□□ -1.29
CDC42SE1-203ENST00000470278 COX7CP15954 63 aa7□□□□□ -1.29
CDC42SE1-203ENST00000470278 NDUFC1O43677 76 aa6.99□□□□□ -1.29
CDC42SE1-203ENST00000470278 SPANXA2-OT1Q8N9U9 137 aa6.97□□□□□ -1.29
CDC42SE1-203ENST00000470278 SYNE2Q8WXH0 6885 aaKnown RBP6.96□□□□□ -1.29
CDC42SE1-203ENST00000470278 ACYP2P14621 99 aa6.92□□□□□ -1.3
CDC42SE1-203ENST00000470278 ANAPC13Q9BS18 74 aa6.92□□□□□ -1.3
CDC42SE1-203ENST00000470278 H0YAA0 97 aa6.9□□□□□ -1.3
CDC42SE1-203ENST00000470278 KRTAP19-6Q3LI70 58 aa6.84□□□□□ -1.31
CDC42SE1-203ENST00000470278 H7BZZ5 65 aa6.83□□□□□ -1.32
CDC42SE1-203ENST00000470278 CYSTM1Q9H1C7 97 aa6.83□□□□□ -1.32
CDC42SE1-203ENST00000470278 SPTSSBQ8NFR3 76 aa6.79□□□□□ -1.32
CDC42SE1-203ENST00000470278 CRIPTQ9P021 101 aa6.79□□□□□ -1.32
CDC42SE1-203ENST00000470278 CHKB-CPT1BH3BT56 60 aa6.78□□□□□ -1.32
CDC42SE1-203ENST00000470278 ADM2Q7Z4H4 148 aa6.76□□□□□ -1.33
CDC42SE1-203ENST00000470278 SPRR2GQ9BYE4 73 aa6.76□□□□□ -1.33
CDC42SE1-203ENST00000470278 CCDC179H3BU77 68 aa6.75□□□□□ -1.33
CDC42SE1-203ENST00000470278 COA5Q86WW8 74 aa6.71□□□□□ -1.34
CDC42SE1-203ENST00000470278 KRTAP3-2Q9BYR7 98 aa6.67□□□□□ -1.34
CDC42SE1-203ENST00000470278 KRTAP19-8Q3LI54 63 aa6.66□□□□□ -1.34
CDC42SE1-203ENST00000470278 KRTAP6-3Q3LI67 103 aa6.66□□□□□ -1.34
CDC42SE1-203ENST00000470278 P0C880 135 aa6.65□□□□□ -1.34
CDC42SE1-203ENST00000470278 ATP5EP56381 51 aaPredicted RBP6.64□□□□□ -1.35
CDC42SE1-203ENST00000470278 NEBP20929 6669 aa6.63□□□□□ -1.35
CDC42SE1-203ENST00000470278 SVIPQ8NHG7 77 aa6.62□□□□□ -1.35
CDC42SE1-203ENST00000470278 Q5VV11 94 aa6.6□□□□□ -1.35
CDC42SE1-203ENST00000470278 MT1BP07438 61 aa6.59□□□□□ -1.35
CDC42SE1-203ENST00000470278 R4GN34 69 aa6.58□□□□□ -1.36
CDC42SE1-203ENST00000470278 TMEM258P61165 79 aa6.57□□□□□ -1.36
CDC42SE1-203ENST00000470278 M0QZ58 72 aa6.53□□□□□ -1.36
CDC42SE1-203ENST00000470278 MUC12Q9UKN1 5478 aa6.48□□□□□ -1.37
CDC42SE1-203ENST00000470278 SEC61GP60059 68 aa6.46□□□□□ -1.38
CDC42SE1-203ENST00000470278 SERP1Q9Y6X1 66 aa6.43□□□□□ -1.38
CDC42SE1-203ENST00000470278 KRTAP10-5P60370 271 aa6.38□□□□□ -1.39
CDC42SE1-203ENST00000470278 LINC01554Q52M75 96 aa6.38□□□□□ -1.39
CDC42SE1-203ENST00000470278 A6NN06 94 aa6.37□□□□□ -1.39
CDC42SE1-203ENST00000470278 PLAC4Q8WY50 150 aa6.37□□□□□ -1.39
CDC42SE1-203ENST00000470278 A0A1B0GU69 56 aa6.36□□□□□ -1.39
CDC42SE1-203ENST00000470278 KRTAP13-4Q3LI77 160 aa6.36□□□□□ -1.39
CDC42SE1-203ENST00000470278 PCP4P48539 62 aa6.33□□□□□ -1.4
CDC42SE1-203ENST00000470278 KMT2DO14686 5537 aa6.32□□□□□ -1.4
CDC42SE1-203ENST00000470278 A0A1B0GU33 70 aa6.31□□□□□ -1.4
CDC42SE1-203ENST00000470278 MDN1Q9NU22 5596 aa6.3□□□□□ -1.4
CDC42SE1-203ENST00000470278 KRTAP5-9P26371 169 aa6.29□□□□□ -1.4
CDC42SE1-203ENST00000470278 LINC01558Q9Y6Z2 57 aa6.29□□□□□ -1.4
CDC42SE1-203ENST00000470278 KRTAP20-1Q3LI63 56 aa6.28□□□□□ -1.4
CDC42SE1-203ENST00000470278 PRR15LQ9BU68 103 aa6.28□□□□□ -1.4
CDC42SE1-203ENST00000470278 PRO2289Q9P1D8 64 aa6.28□□□□□ -1.4
CDC42SE1-203ENST00000470278 MT1XP80297 61 aa6.27□□□□□ -1.41
CDC42SE1-203ENST00000470278 SPATA8Q6RVD6 105 aa6.23□□□□□ -1.41
CDC42SE1-203ENST00000470278 A0A0D9SG42 100 aa6.16□□□□□ -1.42
CDC42SE1-203ENST00000470278 SMIM26A0A096LP01 95 aa6.15□□□□□ -1.42
CDC42SE1-203ENST00000470278 V9GYY9 64 aa6.15□□□□□ -1.42
CDC42SE1-203ENST00000470278 Q1T7F1 81 aa6.12□□□□□ -1.43
CDC42SE1-203ENST00000470278 RPS28P62857 69 aaKnown RBP6.11□□□□□ -1.43
CDC42SE1-203ENST00000470278 KRTAP12-1P59990 96 aa6.09□□□□□ -1.43
CDC42SE1-203ENST00000470278 KRTAP12-2P59991 146 aa6.09□□□□□ -1.43
CDC42SE1-203ENST00000470278 CAMK2N1Q7Z7J9 78 aa6.09□□□□□ -1.43
CDC42SE1-203ENST00000470278 UQCR11O14957 56 aa6.08□□□□□ -1.44
CDC42SE1-203ENST00000470278 A8MU10 97 aa6.06□□□□□ -1.44
CDC42SE1-203ENST00000470278 SPINT4Q6UDR6 99 aa6.05□□□□□ -1.44
CDC42SE1-203ENST00000470278 KRTAP2-3P0C7H8 128 aa6.02□□□□□ -1.45
CDC42SE1-203ENST00000470278 KRTAP2-4Q9BYR9 128 aa6.02□□□□□ -1.45
CDC42SE1-203ENST00000470278 PSPHP1O15172 72 aa6.01□□□□□ -1.45
CDC42SE1-203ENST00000470278 KRTAP10-7P60409 375 aaPredicted RBP5.97□□□□□ -1.45
CDC42SE1-203ENST00000470278 KRTAP10-12P60413 245 aa5.97□□□□□ -1.45
CDC42SE1-203ENST00000470278 MIR22HGQ0VDD5 57 aa5.95□□□□□ -1.46
CDC42SE1-203ENST00000470278 SPRR2FQ96RM1 72 aa5.94□□□□□ -1.46
CDC42SE1-203ENST00000470278 SPRR2EP22531 72 aa5.92□□□□□ -1.46
CDC42SE1-203ENST00000470278 SPRR2BP35325 72 aa5.92□□□□□ -1.46
CDC42SE1-203ENST00000470278 SPRR2AP35326 72 aa5.92□□□□□ -1.46
CDC42SE1-203ENST00000470278 LCE1AQ5T7P2 110 aa5.89□□□□□ -1.47
CDC42SE1-203ENST00000470278 KRTAP8-1Q8IUC2 63 aa5.86□□□□□ -1.47
CDC42SE1-203ENST00000470278 KRTAP4-8A0A0G2JLE6 195 aa5.85□□□□□ -1.47
CDC42SE1-203ENST00000470278 KRTAP4-8Q9BYQ9 185 aa5.85□□□□□ -1.47
CDC42SE1-203ENST00000470278 A6NED7 52 aa5.84□□□□□ -1.47
CDC42SE1-203ENST00000470278 KRTAP2-2Q9BYT5 123 aa5.8□□□□□ -1.48
CDC42SE1-203ENST00000470278 KRTAP2-1Q9BYU5 128 aa5.8□□□□□ -1.48
CDC42SE1-203ENST00000470278 K7ERS5 55 aa5.78□□□□□ -1.48
CDC42SE1-203ENST00000470278 C10orf95Q9H7T3 257 aa5.78□□□□□ -1.48
CDC42SE1-203ENST00000470278 SPRR2DP22532 72 aa5.72□□□□□ -1.49
CDC42SE1-203ENST00000470278 TNP1P09430 55 aa5.71□□□□□ -1.5
CDC42SE1-203ENST00000470278 CDC42SE1Q9NRR8 79 aa5.68□□□□□ -1.5
CDC42SE1-203ENST00000470278 GPR98Q8WXG9 6306 aa5.62□□□□□ -1.51
CDC42SE1-203ENST00000470278 KRTAP19-7Q3SYF9 63 aa5.6□□□□□ -1.51
CDC42SE1-203ENST00000470278 LCE3BQ5TA77 95 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms