RNA–Protein interactions for RNA: ENST00000470161.6

PCGF3-208, Transcript of polycomb group ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCGF3, Length 1,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-208ENST00000470161 ACYP2P14621 99 aa9.8□□□□□ -0.84
PCGF3-208ENST00000470161 MPLKIPQ8TAP9 179 aa9.75□□□□□ -0.85
PCGF3-208ENST00000470161 KRTAP10-6P60371 365 aaPredicted RBP9.71□□□□□ -0.86
PCGF3-208ENST00000470161 A8MUN3 132 aa9.7□□□□□ -0.86
PCGF3-208ENST00000470161 KRTAP3-1Q9BYR8 98 aa9.7□□□□□ -0.86
PCGF3-208ENST00000470161 CHKB-CPT1BH3BT56 60 aa9.69□□□□□ -0.86
PCGF3-208ENST00000470161 KRTAP9-2Q9BYQ4 174 aa9.67□□□□□ -0.86
PCGF3-208ENST00000470161 LORP23490 312 aaPredicted RBP9.67□□□□□ -0.86
PCGF3-208ENST00000470161 Q1T7F1 81 aa9.59□□□□□ -0.87
PCGF3-208ENST00000470161 LCE2DQ5TA82 110 aaPredicted RBP9.54□□□□□ -0.88
PCGF3-208ENST00000470161 V9GYY9 64 aa9.52□□□□□ -0.89
PCGF3-208ENST00000470161 PSPHP1O15172 72 aa9.48□□□□□ -0.89
PCGF3-208ENST00000470161 H1FX-AS1Q4G0G2 97 aa9.48□□□□□ -0.89
PCGF3-208ENST00000470161 LINC01558Q9Y6Z2 57 aa9.47□□□□□ -0.89
PCGF3-208ENST00000470161 PRR15LQ9BU68 103 aa9.46□□□□□ -0.89
PCGF3-208ENST00000470161 SPTSSBQ8NFR3 76 aa9.42□□□□□ -0.9
PCGF3-208ENST00000470161 KRTAP9-8Q9BYQ0 159 aa9.42□□□□□ -0.9
PCGF3-208ENST00000470161 S4R3F8 94 aa9.4□□□□□ -0.9
PCGF3-208ENST00000470161 LCA10Q71F78 164 aa9.39□□□□□ -0.91
PCGF3-208ENST00000470161 Q5VV11 94 aa9.37□□□□□ -0.91
PCGF3-208ENST00000470161 KRTAP3-3Q9BYR6 98 aa9.34□□□□□ -0.91
PCGF3-208ENST00000470161 MT2AP02795 61 aa9.32□□□□□ -0.92
PCGF3-208ENST00000470161 A0A1B0GU69 56 aa9.32□□□□□ -0.92
PCGF3-208ENST00000470161 KRTAP10-10P60014 251 aa9.3□□□□□ -0.92
PCGF3-208ENST00000470161 KRTAP9-6A0A140TA67 174 aa9.26□□□□□ -0.93
PCGF3-208ENST00000470161 MT1FP04733 61 aa9.25□□□□□ -0.93
PCGF3-208ENST00000470161 SEC61GP60059 68 aa9.21□□□□□ -0.93
PCGF3-208ENST00000470161 CRCT1Q9UGL9 99 aa9.2□□□□□ -0.94
PCGF3-208ENST00000470161 FSIP2Q5CZC0 6907 aa9.2□□□□□ -0.94
PCGF3-208ENST00000470161 A6NED7 52 aa9.16□□□□□ -0.94
PCGF3-208ENST00000470161 BRK1Q8WUW1 75 aa9.15□□□□□ -0.94
PCGF3-208ENST00000470161 CSAG1Q6PB30 78 aa9.13□□□□□ -0.95
PCGF3-208ENST00000470161 KRTAP9-3Q9BYQ3 159 aa9.11□□□□□ -0.95
PCGF3-208ENST00000470161 A8MU10 97 aa9.04□□□□□ -0.96
PCGF3-208ENST00000470161 KRTAP3-2Q9BYR7 98 aa9.04□□□□□ -0.96
PCGF3-208ENST00000470161 UQCR11O14957 56 aa9.02□□□□□ -0.97
PCGF3-208ENST00000470161 LCE2BO14633 110 aa9□□□□□ -0.97
PCGF3-208ENST00000470161 ADM2Q7Z4H4 148 aa9□□□□□ -0.97
PCGF3-208ENST00000470161 A0A1B0GU33 70 aa9□□□□□ -0.97
PCGF3-208ENST00000470161 CDC42SE1Q9NRR8 79 aa8.99□□□□□ -0.97
PCGF3-208ENST00000470161 P0C880 135 aa8.97□□□□□ -0.97
PCGF3-208ENST00000470161 MIR22HGQ0VDD5 57 aa8.96□□□□□ -0.98
PCGF3-208ENST00000470161 PRO0628Q9UI54 55 aa8.94□□□□□ -0.98
PCGF3-208ENST00000470161 USH2AO75445 5202 aa8.93□□□□□ -0.98
PCGF3-208ENST00000470161 SPATA8Q6RVD6 105 aa8.93□□□□□ -0.98
PCGF3-208ENST00000470161 SVIPQ8NHG7 77 aa8.92□□□□□ -0.98
PCGF3-208ENST00000470161 H0YAA0 97 aa8.91□□□□□ -0.98
PCGF3-208ENST00000470161 KRTAP13-4Q3LI77 160 aa8.83□□□□□ -1
PCGF3-208ENST00000470161 SSPOA2VEC9 5147 aa8.81□□□□□ -1
PCGF3-208ENST00000470161 KRTAP19-1Q8IUB9 90 aa8.77□□□□□ -1.01
PCGF3-208ENST00000470161 CRIPTQ9P021 101 aa8.72□□□□□ -1.01
PCGF3-208ENST00000470161 SPRR2GQ9BYE4 73 aa8.7□□□□□ -1.02
PCGF3-208ENST00000470161 A0A0D9SG42 100 aa8.69□□□□□ -1.02
PCGF3-208ENST00000470161 M0QZ58 72 aa8.67□□□□□ -1.02
PCGF3-208ENST00000470161 KRTAP19-6Q3LI70 58 aa8.67□□□□□ -1.02
PCGF3-208ENST00000470161 R4GN34 69 aa8.65□□□□□ -1.03
PCGF3-208ENST00000470161 PMAIP1Q13794 54 aa8.62□□□□□ -1.03
PCGF3-208ENST00000470161 KRTAP19-8Q3LI54 63 aa8.59□□□□□ -1.03
PCGF3-208ENST00000470161 FCGBPQ9Y6R7 5405 aaPredicted RBP8.58□□□□□ -1.04
PCGF3-208ENST00000470161 A6NN06 94 aa8.57□□□□□ -1.04
PCGF3-208ENST00000470161 LINC01554Q52M75 96 aa8.55□□□□□ -1.04
PCGF3-208ENST00000470161 MT1BP07438 61 aa8.54□□□□□ -1.04
PCGF3-208ENST00000470161 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.53□□□□□ -1.04
PCGF3-208ENST00000470161 K7ERS5 55 aa8.5□□□□□ -1.05
PCGF3-208ENST00000470161 KRTAP12-1P59990 96 aa8.47□□□□□ -1.05
PCGF3-208ENST00000470161 KRTAP12-2P59991 146 aa8.47□□□□□ -1.05
PCGF3-208ENST00000470161 SPINT4Q6UDR6 99 aa8.46□□□□□ -1.06
PCGF3-208ENST00000470161 KRTAP9-7A8MTY7 169 aa8.37□□□□□ -1.07
PCGF3-208ENST00000470161 PLAC4Q8WY50 150 aa8.34□□□□□ -1.08
PCGF3-208ENST00000470161 KRTAP10-5P60370 271 aa8.32□□□□□ -1.08
PCGF3-208ENST00000470161 KTN1-AS1Q86SY8 53 aa8.28□□□□□ -1.08
PCGF3-208ENST00000470161 MACF1Q9UPN3 7388 aaKnown RBP8.28□□□□□ -1.08
PCGF3-208ENST00000470161 PRO2289Q9P1D8 64 aa8.21□□□□□ -1.09
PCGF3-208ENST00000470161 ROMO1P60602 79 aa8.19□□□□□ -1.1
PCGF3-208ENST00000470161 SYNE2Q8WXH0 6885 aaKnown RBP8.15□□□□□ -1.11
PCGF3-208ENST00000470161 PRAC1Q96KF2 57 aa8.14□□□□□ -1.11
PCGF3-208ENST00000470161 CAMK2N1Q7Z7J9 78 aa8.12□□□□□ -1.11
PCGF3-208ENST00000470161 MT1XP80297 61 aa8.08□□□□□ -1.12
PCGF3-208ENST00000470161 KRTAP6-3Q3LI67 103 aa8.07□□□□□ -1.12
PCGF3-208ENST00000470161 C10orf95Q9H7T3 257 aa8.02□□□□□ -1.13
PCGF3-208ENST00000470161 KRTAP25-1Q3LHN0 102 aa7.86□□□□□ -1.15
PCGF3-208ENST00000470161 KMT2DO14686 5537 aa7.81□□□□□ -1.16
PCGF3-208ENST00000470161 KRTAP5-9P26371 169 aa7.79□□□□□ -1.16
PCGF3-208ENST00000470161 KRTAP8-1Q8IUC2 63 aa7.75□□□□□ -1.17
PCGF3-208ENST00000470161 KRTAP10-7P60409 375 aaPredicted RBP7.73□□□□□ -1.17
PCGF3-208ENST00000470161 TNP1P09430 55 aa7.72□□□□□ -1.17
PCGF3-208ENST00000470161 KRTAP10-12P60413 245 aa7.69□□□□□ -1.18
PCGF3-208ENST00000470161 SPRR2FQ96RM1 72 aa7.69□□□□□ -1.18
PCGF3-208ENST00000470161 KRTAP4-8A0A0G2JLE6 195 aa7.67□□□□□ -1.18
PCGF3-208ENST00000470161 KRTAP4-8Q9BYQ9 185 aa7.67□□□□□ -1.18
PCGF3-208ENST00000470161 MUC12Q9UKN1 5478 aa7.66□□□□□ -1.18
PCGF3-208ENST00000470161 NEBP20929 6669 aa7.55□□□□□ -1.2
PCGF3-208ENST00000470161 MDN1Q9NU22 5596 aa7.51□□□□□ -1.21
PCGF3-208ENST00000470161 SPRR2EP22531 72 aa7.51□□□□□ -1.21
PCGF3-208ENST00000470161 SPRR2BP35325 72 aa7.51□□□□□ -1.21
PCGF3-208ENST00000470161 SPRR2AP35326 72 aa7.51□□□□□ -1.21
PCGF3-208ENST00000470161 PP632Q6XCG6 107 aa7.51□□□□□ -1.21
PCGF3-208ENST00000470161 KRTAP23-1A1A580 65 aa7.44□□□□□ -1.22
PCGF3-208ENST00000470161 LCE3AQ5TA76 89 aa7.43□□□□□ -1.22
PCGF3-208ENST00000470161 LCE1AQ5T7P2 110 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms