RNA–Protein interactions for RNA: ENST00000469804.1

KPNA4-202, Transcript of karyopherin subunit alpha 4, humanhuman

TSL 2

Gene KPNA4, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4-202ENST00000469804 LCE2BO14633 110 aa11.86□□□□□ -0.51
KPNA4-202ENST00000469804 TRAV7A0A075B6U4 112 aa11.84□□□□□ -0.51
KPNA4-202ENST00000469804 SMIM20Q8N5G0 67 aa11.81□□□□□ -0.52
KPNA4-202ENST00000469804 USH2AO75445 5202 aa11.79□□□□□ -0.52
KPNA4-202ENST00000469804 A8MUN3 132 aa11.79□□□□□ -0.52
KPNA4-202ENST00000469804 NDUFC1O43677 76 aa11.68□□□□□ -0.54
KPNA4-202ENST00000469804 DMAC1Q96GE9 116 aa11.65□□□□□ -0.54
KPNA4-202ENST00000469804 SNURFQ9Y675 71 aa11.63□□□□□ -0.55
KPNA4-202ENST00000469804 SSPOA2VEC9 5147 aa11.62□□□□□ -0.55
KPNA4-202ENST00000469804 SERP2Q8N6R1 65 aa11.59□□□□□ -0.55
KPNA4-202ENST00000469804 KRTAP19-1Q8IUB9 90 aa11.55□□□□□ -0.56
KPNA4-202ENST00000469804 C20orf197Q8N268 126 aa11.54□□□□□ -0.56
KPNA4-202ENST00000469804 H0YAA0 97 aa11.45□□□□□ -0.58
KPNA4-202ENST00000469804 SPRR2GQ9BYE4 73 aa11.42□□□□□ -0.58
KPNA4-202ENST00000469804 ACYP2P14621 99 aa11.41□□□□□ -0.58
KPNA4-202ENST00000469804 ADM2Q7Z4H4 148 aa11.41□□□□□ -0.58
KPNA4-202ENST00000469804 COX7CP15954 63 aa11.35□□□□□ -0.59
KPNA4-202ENST00000469804 KRTAP3-2Q9BYR7 98 aa11.34□□□□□ -0.59
KPNA4-202ENST00000469804 KRTAP19-6Q3LI70 58 aa11.33□□□□□ -0.6
KPNA4-202ENST00000469804 SPANXA2-OT1Q8N9U9 137 aa11.32□□□□□ -0.6
KPNA4-202ENST00000469804 CRIPTQ9P021 101 aa11.32□□□□□ -0.6
KPNA4-202ENST00000469804 KRTAP19-8Q3LI54 63 aa11.3□□□□□ -0.6
KPNA4-202ENST00000469804 MT1BP07438 61 aa11.29□□□□□ -0.6
KPNA4-202ENST00000469804 FCGBPQ9Y6R7 5405 aaPredicted RBP11.27□□□□□ -0.6
KPNA4-202ENST00000469804 Q5VV11 94 aa11.26□□□□□ -0.61
KPNA4-202ENST00000469804 P0C880 135 aa11.24□□□□□ -0.61
KPNA4-202ENST00000469804 CHKB-CPT1BH3BT56 60 aa11.23□□□□□ -0.61
KPNA4-202ENST00000469804 CYSTM1Q9H1C7 97 aa11.21□□□□□ -0.61
KPNA4-202ENST00000469804 SPTSSBQ8NFR3 76 aa11.17□□□□□ -0.62
KPNA4-202ENST00000469804 ANAPC13Q9BS18 74 aa11.17□□□□□ -0.62
KPNA4-202ENST00000469804 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.12□□□□□ -0.63
KPNA4-202ENST00000469804 H7BZZ5 65 aa11.11□□□□□ -0.63
KPNA4-202ENST00000469804 COA5Q86WW8 74 aa11.05□□□□□ -0.64
KPNA4-202ENST00000469804 R4GN34 69 aa11.05□□□□□ -0.64
KPNA4-202ENST00000469804 M0QZ58 72 aa11.02□□□□□ -0.65
KPNA4-202ENST00000469804 CCDC179H3BU77 68 aa10.98□□□□□ -0.65
KPNA4-202ENST00000469804 A6NN06 94 aa10.97□□□□□ -0.65
KPNA4-202ENST00000469804 KRTAP10-5P60370 271 aa10.91□□□□□ -0.66
KPNA4-202ENST00000469804 LINC01554Q52M75 96 aa10.86□□□□□ -0.67
KPNA4-202ENST00000469804 KRTAP9-7A8MTY7 169 aa10.85□□□□□ -0.67
KPNA4-202ENST00000469804 MACF1Q9UPN3 7388 aaKnown RBP10.82□□□□□ -0.68
KPNA4-202ENST00000469804 PLAC4Q8WY50 150 aa10.79□□□□□ -0.68
KPNA4-202ENST00000469804 MT1XP80297 61 aa10.68□□□□□ -0.7
KPNA4-202ENST00000469804 KRTAP13-4Q3LI77 160 aa10.68□□□□□ -0.7
KPNA4-202ENST00000469804 ATP5EP56381 51 aaPredicted RBP10.62□□□□□ -0.71
KPNA4-202ENST00000469804 SEC61GP60059 68 aa10.62□□□□□ -0.71
KPNA4-202ENST00000469804 SYNE2Q8WXH0 6885 aaKnown RBP10.62□□□□□ -0.71
KPNA4-202ENST00000469804 SERP1Q9Y6X1 66 aa10.61□□□□□ -0.71
KPNA4-202ENST00000469804 PRO2289Q9P1D8 64 aa10.59□□□□□ -0.71
KPNA4-202ENST00000469804 TMEM258P61165 79 aa10.52□□□□□ -0.73
KPNA4-202ENST00000469804 KRTAP6-3Q3LI67 103 aa10.49□□□□□ -0.73
KPNA4-202ENST00000469804 A0A1B0GU33 70 aa10.44□□□□□ -0.74
KPNA4-202ENST00000469804 A0A1B0GU69 56 aa10.44□□□□□ -0.74
KPNA4-202ENST00000469804 SPATA8Q6RVD6 105 aa10.44□□□□□ -0.74
KPNA4-202ENST00000469804 A0A0D9SG42 100 aa10.38□□□□□ -0.75
KPNA4-202ENST00000469804 KRTAP12-2P59991 146 aa10.28□□□□□ -0.76
KPNA4-202ENST00000469804 LINC01558Q9Y6Z2 57 aa10.24□□□□□ -0.77
KPNA4-202ENST00000469804 CAMK2N1Q7Z7J9 78 aa10.23□□□□□ -0.77
KPNA4-202ENST00000469804 KMT2DO14686 5537 aa10.23□□□□□ -0.77
KPNA4-202ENST00000469804 KRTAP10-7P60409 375 aaPredicted RBP10.22□□□□□ -0.77
KPNA4-202ENST00000469804 PRR15LQ9BU68 103 aa10.2□□□□□ -0.78
KPNA4-202ENST00000469804 SPINT4Q6UDR6 99 aa10.19□□□□□ -0.78
KPNA4-202ENST00000469804 KRTAP5-9P26371 169 aa10.18□□□□□ -0.78
KPNA4-202ENST00000469804 KRTAP12-1P59990 96 aa10.17□□□□□ -0.78
KPNA4-202ENST00000469804 A8MU10 97 aa10.15□□□□□ -0.78
KPNA4-202ENST00000469804 KRTAP4-8A0A0G2JLE6 195 aa10.13□□□□□ -0.79
KPNA4-202ENST00000469804 KRTAP4-8Q9BYQ9 185 aa10.13□□□□□ -0.79
KPNA4-202ENST00000469804 SMIM26A0A096LP01 95 aa10.12□□□□□ -0.79
KPNA4-202ENST00000469804 KRTAP10-12P60413 245 aa10.12□□□□□ -0.79
KPNA4-202ENST00000469804 KRTAP8-1Q8IUC2 63 aa10.09□□□□□ -0.79
KPNA4-202ENST00000469804 MUC12Q9UKN1 5478 aa10.06□□□□□ -0.8
KPNA4-202ENST00000469804 SPRR2FQ96RM1 72 aa10.01□□□□□ -0.81
KPNA4-202ENST00000469804 PCP4P48539 62 aa9.98□□□□□ -0.81
KPNA4-202ENST00000469804 NEBP20929 6669 aa9.95□□□□□ -0.82
KPNA4-202ENST00000469804 UQCR11O14957 56 aa9.89□□□□□ -0.83
KPNA4-202ENST00000469804 PSPHP1O15172 72 aa9.82□□□□□ -0.84
KPNA4-202ENST00000469804 V9GYY9 64 aa9.82□□□□□ -0.84
KPNA4-202ENST00000469804 MDN1Q9NU22 5596 aa9.81□□□□□ -0.84
KPNA4-202ENST00000469804 Q1T7F1 81 aa9.81□□□□□ -0.84
KPNA4-202ENST00000469804 SPRR2EP22531 72 aa9.77□□□□□ -0.85
KPNA4-202ENST00000469804 SPRR2BP35325 72 aa9.77□□□□□ -0.85
KPNA4-202ENST00000469804 SPRR2AP35326 72 aa9.77□□□□□ -0.85
KPNA4-202ENST00000469804 MIR22HGQ0VDD5 57 aa9.73□□□□□ -0.85
KPNA4-202ENST00000469804 C10orf95Q9H7T3 257 aa9.7□□□□□ -0.86
KPNA4-202ENST00000469804 LCE1AQ5T7P2 110 aa9.69□□□□□ -0.86
KPNA4-202ENST00000469804 RPS28P62857 69 aaKnown RBP9.62□□□□□ -0.87
KPNA4-202ENST00000469804 KRTAP20-1Q3LI63 56 aa9.54□□□□□ -0.88
KPNA4-202ENST00000469804 KRTAP19-7Q3SYF9 63 aa9.54□□□□□ -0.88
KPNA4-202ENST00000469804 TNP1P09430 55 aa9.52□□□□□ -0.89
KPNA4-202ENST00000469804 A6NED7 52 aa9.48□□□□□ -0.89
KPNA4-202ENST00000469804 SPRR2DP22532 72 aa9.44□□□□□ -0.9
KPNA4-202ENST00000469804 MT1EP04732 61 aa9.43□□□□□ -0.9
KPNA4-202ENST00000469804 KRTAP19-5Q3LI72 72 aa9.42□□□□□ -0.9
KPNA4-202ENST00000469804 K7ERS5 55 aa9.41□□□□□ -0.9
KPNA4-202ENST00000469804 LCE3AQ5TA76 89 aa9.41□□□□□ -0.9
KPNA4-202ENST00000469804 KRTAP2-3P0C7H8 128 aa9.37□□□□□ -0.91
KPNA4-202ENST00000469804 KRTAP2-4Q9BYR9 128 aa9.37□□□□□ -0.91
KPNA4-202ENST00000469804 KRTAP19-3Q7Z4W3 81 aa9.25□□□□□ -0.93
KPNA4-202ENST00000469804 LCE5AQ5TCM9 118 aa9.21□□□□□ -0.94
KPNA4-202ENST00000469804 KRTAP25-1Q3LHN0 102 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms