RNA–Protein interactions for RNA: ENST00000469757.1

TRAPPC3-206, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 221 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-206ENST00000469757 FAM236BA0A1B0GV22 79 aa3.85□□□□□ -1.79
TRAPPC3-206ENST00000469757 SCGB1A1P11684 91 aa3.85□□□□□ -1.79
TRAPPC3-206ENST00000469757 SMIM20Q8N5G0 67 aa3.84□□□□□ -1.79
TRAPPC3-206ENST00000469757 USH2AO75445 5202 aa3.83□□□□□ -1.8
TRAPPC3-206ENST00000469757 TRAV7A0A075B6U4 112 aa3.82□□□□□ -1.8
TRAPPC3-206ENST00000469757 DMAC1Q96GE9 116 aa3.81□□□□□ -1.8
TRAPPC3-206ENST00000469757 H0YAA0 97 aa3.8□□□□□ -1.8
TRAPPC3-206ENST00000469757 KRTAP19-1Q8IUB9 90 aa3.8□□□□□ -1.8
TRAPPC3-206ENST00000469757 NDUFC1O43677 76 aa3.78□□□□□ -1.8
TRAPPC3-206ENST00000469757 SPRR2GQ9BYE4 73 aa3.78□□□□□ -1.8
TRAPPC3-206ENST00000469757 SSPOA2VEC9 5147 aa3.76□□□□□ -1.81
TRAPPC3-206ENST00000469757 KRTAP19-6Q3LI70 58 aa3.76□□□□□ -1.81
TRAPPC3-206ENST00000469757 KRTAP19-8Q3LI54 63 aa3.74□□□□□ -1.81
TRAPPC3-206ENST00000469757 SERP2Q8N6R1 65 aa3.74□□□□□ -1.81
TRAPPC3-206ENST00000469757 CRIPTQ9P021 101 aa3.74□□□□□ -1.81
TRAPPC3-206ENST00000469757 MT1BP07438 61 aa3.71□□□□□ -1.82
TRAPPC3-206ENST00000469757 FCGBPQ9Y6R7 5405 aaPredicted RBP3.71□□□□□ -1.82
TRAPPC3-206ENST00000469757 SPANXA2-OT1Q8N9U9 137 aa3.7□□□□□ -1.82
TRAPPC3-206ENST00000469757 MACF1Q9UPN3 7388 aaKnown RBP3.69□□□□□ -1.82
TRAPPC3-206ENST00000469757 SNURFQ9Y675 71 aa3.69□□□□□ -1.82
TRAPPC3-206ENST00000469757 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.68□□□□□ -1.82
TRAPPC3-206ENST00000469757 Q5VV11 94 aa3.68□□□□□ -1.82
TRAPPC3-206ENST00000469757 C20orf197Q8N268 126 aa3.68□□□□□ -1.82
TRAPPC3-206ENST00000469757 ACYP2P14621 99 aa3.67□□□□□ -1.82
TRAPPC3-206ENST00000469757 ADM2Q7Z4H4 148 aa3.67□□□□□ -1.82
TRAPPC3-206ENST00000469757 COX7CP15954 63 aa3.65□□□□□ -1.83
TRAPPC3-206ENST00000469757 KRTAP3-2Q9BYR7 98 aa3.64□□□□□ -1.83
TRAPPC3-206ENST00000469757 P0C880 135 aa3.63□□□□□ -1.83
TRAPPC3-206ENST00000469757 SPTSSBQ8NFR3 76 aa3.63□□□□□ -1.83
TRAPPC3-206ENST00000469757 SYNE2Q8WXH0 6885 aaKnown RBP3.61□□□□□ -1.83
TRAPPC3-206ENST00000469757 KRTAP10-5P60370 271 aa3.6□□□□□ -1.83
TRAPPC3-206ENST00000469757 CHKB-CPT1BH3BT56 60 aa3.59□□□□□ -1.83
TRAPPC3-206ENST00000469757 H7BZZ5 65 aa3.59□□□□□ -1.83
TRAPPC3-206ENST00000469757 CYSTM1Q9H1C7 97 aa3.59□□□□□ -1.83
TRAPPC3-206ENST00000469757 KRTAP9-7A8MTY7 169 aa3.58□□□□□ -1.84
TRAPPC3-206ENST00000469757 R4GN34 69 aa3.58□□□□□ -1.84
TRAPPC3-206ENST00000469757 A6NN06 94 aa3.57□□□□□ -1.84
TRAPPC3-206ENST00000469757 COA5Q86WW8 74 aa3.56□□□□□ -1.84
TRAPPC3-206ENST00000469757 M0QZ58 72 aa3.55□□□□□ -1.84
TRAPPC3-206ENST00000469757 ANAPC13Q9BS18 74 aa3.55□□□□□ -1.84
TRAPPC3-206ENST00000469757 MT1XP80297 61 aa3.5□□□□□ -1.85
TRAPPC3-206ENST00000469757 PRO2289Q9P1D8 64 aa3.49□□□□□ -1.85
TRAPPC3-206ENST00000469757 CCDC179H3BU77 68 aa3.48□□□□□ -1.85
TRAPPC3-206ENST00000469757 KRTAP6-3Q3LI67 103 aa3.48□□□□□ -1.85
TRAPPC3-206ENST00000469757 PLAC4Q8WY50 150 aa3.48□□□□□ -1.85
TRAPPC3-206ENST00000469757 ATP5EP56381 51 aaPredicted RBP3.47□□□□□ -1.85
TRAPPC3-206ENST00000469757 KRTAP13-4Q3LI77 160 aa3.45□□□□□ -1.86
TRAPPC3-206ENST00000469757 LINC01554Q52M75 96 aa3.45□□□□□ -1.86
TRAPPC3-206ENST00000469757 KRTAP12-2P59991 146 aa3.43□□□□□ -1.86
TRAPPC3-206ENST00000469757 NEBP20929 6669 aa3.42□□□□□ -1.86
TRAPPC3-206ENST00000469757 KRTAP5-9P26371 169 aa3.41□□□□□ -1.86
TRAPPC3-206ENST00000469757 TMEM258P61165 79 aa3.41□□□□□ -1.86
TRAPPC3-206ENST00000469757 SEC61GP60059 68 aa3.4□□□□□ -1.87
TRAPPC3-206ENST00000469757 SERP1Q9Y6X1 66 aa3.39□□□□□ -1.87
TRAPPC3-206ENST00000469757 A0A1B0GU33 70 aa3.36□□□□□ -1.87
TRAPPC3-206ENST00000469757 A0A1B0GU69 56 aa3.34□□□□□ -1.87
TRAPPC3-206ENST00000469757 KRTAP10-12P60413 245 aa3.34□□□□□ -1.87
TRAPPC3-206ENST00000469757 KRTAP10-7P60409 375 aaPredicted RBP3.32□□□□□ -1.88
TRAPPC3-206ENST00000469757 SPATA8Q6RVD6 105 aa3.32□□□□□ -1.88
TRAPPC3-206ENST00000469757 LINC01558Q9Y6Z2 57 aa3.31□□□□□ -1.88
TRAPPC3-206ENST00000469757 KMT2DO14686 5537 aa3.3□□□□□ -1.88
TRAPPC3-206ENST00000469757 A0A0D9SG42 100 aa3.29□□□□□ -1.88
TRAPPC3-206ENST00000469757 KRTAP12-1P59990 96 aa3.29□□□□□ -1.88
TRAPPC3-206ENST00000469757 CAMK2N1Q7Z7J9 78 aa3.29□□□□□ -1.88
TRAPPC3-206ENST00000469757 PRR15LQ9BU68 103 aa3.29□□□□□ -1.88
TRAPPC3-206ENST00000469757 KRTAP8-1Q8IUC2 63 aa3.28□□□□□ -1.88
TRAPPC3-206ENST00000469757 SMIM26A0A096LP01 95 aa3.27□□□□□ -1.89
TRAPPC3-206ENST00000469757 SPRR2FQ96RM1 72 aa3.26□□□□□ -1.89
TRAPPC3-206ENST00000469757 KRTAP4-8A0A0G2JLE6 195 aa3.25□□□□□ -1.89
TRAPPC3-206ENST00000469757 KRTAP4-8Q9BYQ9 185 aa3.25□□□□□ -1.89
TRAPPC3-206ENST00000469757 MUC12Q9UKN1 5478 aa3.25□□□□□ -1.89
TRAPPC3-206ENST00000469757 MDN1Q9NU22 5596 aa3.23□□□□□ -1.89
TRAPPC3-206ENST00000469757 A8MU10 97 aa3.22□□□□□ -1.89
TRAPPC3-206ENST00000469757 SPINT4Q6UDR6 99 aa3.22□□□□□ -1.89
TRAPPC3-206ENST00000469757 LCE1AQ5T7P2 110 aa3.2□□□□□ -1.9
TRAPPC3-206ENST00000469757 SPRR2EP22531 72 aa3.19□□□□□ -1.9
TRAPPC3-206ENST00000469757 SPRR2BP35325 72 aa3.19□□□□□ -1.9
TRAPPC3-206ENST00000469757 SPRR2AP35326 72 aa3.19□□□□□ -1.9
TRAPPC3-206ENST00000469757 UQCR11O14957 56 aa3.18□□□□□ -1.9
TRAPPC3-206ENST00000469757 Q1T7F1 81 aa3.17□□□□□ -1.9
TRAPPC3-206ENST00000469757 V9GYY9 64 aa3.17□□□□□ -1.9
TRAPPC3-206ENST00000469757 KRTAP20-1Q3LI63 56 aa3.14□□□□□ -1.91
TRAPPC3-206ENST00000469757 KRTAP19-7Q3SYF9 63 aa3.14□□□□□ -1.91
TRAPPC3-206ENST00000469757 PCP4P48539 62 aa3.13□□□□□ -1.91
TRAPPC3-206ENST00000469757 C10orf95Q9H7T3 257 aa3.12□□□□□ -1.91
TRAPPC3-206ENST00000469757 RPS28P62857 69 aaKnown RBP3.11□□□□□ -1.91
TRAPPC3-206ENST00000469757 MIR22HGQ0VDD5 57 aa3.11□□□□□ -1.91
TRAPPC3-206ENST00000469757 PSPHP1O15172 72 aa3.1□□□□□ -1.91
TRAPPC3-206ENST00000469757 MT1EP04732 61 aa3.1□□□□□ -1.91
TRAPPC3-206ENST00000469757 KRTAP2-3P0C7H8 128 aa3.09□□□□□ -1.91
TRAPPC3-206ENST00000469757 KRTAP2-4Q9BYR9 128 aa3.09□□□□□ -1.91
TRAPPC3-206ENST00000469757 TNP1P09430 55 aa3.08□□□□□ -1.92
TRAPPC3-206ENST00000469757 SPRR2DP22532 72 aa3.08□□□□□ -1.92
TRAPPC3-206ENST00000469757 LCE5AQ5TCM9 118 aa3.06□□□□□ -1.92
TRAPPC3-206ENST00000469757 KRTAP19-5Q3LI72 72 aa3.05□□□□□ -1.92
TRAPPC3-206ENST00000469757 LCE3AQ5TA76 89 aa3.04□□□□□ -1.92
TRAPPC3-206ENST00000469757 KRTAP19-3Q7Z4W3 81 aa3.04□□□□□ -1.92
TRAPPC3-206ENST00000469757 K7ERS5 55 aa3.02□□□□□ -1.93
TRAPPC3-206ENST00000469757 A6NED7 52 aa3.01□□□□□ -1.93
TRAPPC3-206ENST00000469757 KRTAP25-1Q3LHN0 102 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms