RNA–Protein interactions for RNA: ENST00000469356.3

SREBF1-208, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-208ENST00000469356 ACYP2P14621 99 aa10.96□□□□□ -0.65
SREBF1-208ENST00000469356 KRTAP9-8Q9BYQ0 159 aa10.95□□□□□ -0.66
SREBF1-208ENST00000469356 MT2AP02795 61 aa10.87□□□□□ -0.67
SREBF1-208ENST00000469356 KRTAP3-3Q9BYR6 98 aa10.87□□□□□ -0.67
SREBF1-208ENST00000469356 KRTAP10-10P60014 251 aa10.85□□□□□ -0.67
SREBF1-208ENST00000469356 LCE2DQ5TA82 110 aaPredicted RBP10.82□□□□□ -0.68
SREBF1-208ENST00000469356 CHKB-CPT1BH3BT56 60 aa10.78□□□□□ -0.68
SREBF1-208ENST00000469356 SPTSSBQ8NFR3 76 aa10.78□□□□□ -0.68
SREBF1-208ENST00000469356 H7BZZ5 65 aa10.77□□□□□ -0.69
SREBF1-208ENST00000469356 MT1FP04733 61 aa10.77□□□□□ -0.69
SREBF1-208ENST00000469356 CCDC179H3BU77 68 aa10.74□□□□□ -0.69
SREBF1-208ENST00000469356 KRTAP9-2Q9BYQ4 174 aa10.72□□□□□ -0.69
SREBF1-208ENST00000469356 CYSTM1Q9H1C7 97 aa10.69□□□□□ -0.7
SREBF1-208ENST00000469356 H0YAA0 97 aa10.68□□□□□ -0.7
SREBF1-208ENST00000469356 KRTAP9-3Q9BYQ3 159 aa10.59□□□□□ -0.71
SREBF1-208ENST00000469356 COA5Q86WW8 74 aa10.58□□□□□ -0.71
SREBF1-208ENST00000469356 ATP5EP56381 51 aaPredicted RBP10.58□□□□□ -0.72
SREBF1-208ENST00000469356 ADM2Q7Z4H4 148 aa10.55□□□□□ -0.72
SREBF1-208ENST00000469356 CRIPTQ9P021 101 aa10.54□□□□□ -0.72
SREBF1-208ENST00000469356 TMEM258P61165 79 aa10.48□□□□□ -0.73
SREBF1-208ENST00000469356 LCE2BO14633 110 aa10.38□□□□□ -0.75
SREBF1-208ENST00000469356 SPRR2GQ9BYE4 73 aa10.35□□□□□ -0.75
SREBF1-208ENST00000469356 P0C880 135 aa10.33□□□□□ -0.76
SREBF1-208ENST00000469356 KRTAP19-1Q8IUB9 90 aa10.33□□□□□ -0.76
SREBF1-208ENST00000469356 SEC61GP60059 68 aa10.32□□□□□ -0.76
SREBF1-208ENST00000469356 KRTAP3-2Q9BYR7 98 aa10.32□□□□□ -0.76
SREBF1-208ENST00000469356 R4GN34 69 aa10.3□□□□□ -0.76
SREBF1-208ENST00000469356 CRCT1Q9UGL9 99 aa10.27□□□□□ -0.77
SREBF1-208ENST00000469356 PCP4P48539 62 aa10.26□□□□□ -0.77
SREBF1-208ENST00000469356 SERP1Q9Y6X1 66 aa10.26□□□□□ -0.77
SREBF1-208ENST00000469356 USH2AO75445 5202 aa10.24□□□□□ -0.77
SREBF1-208ENST00000469356 Q5VV11 94 aa10.21□□□□□ -0.78
SREBF1-208ENST00000469356 M0QZ58 72 aa10.2□□□□□ -0.78
SREBF1-208ENST00000469356 KRTAP9-6A0A140TA67 174 aa10.18□□□□□ -0.78
SREBF1-208ENST00000469356 KRTAP19-8Q3LI54 63 aa10.18□□□□□ -0.78
SREBF1-208ENST00000469356 FSIP2Q5CZC0 6907 aa10.14□□□□□ -0.79
SREBF1-208ENST00000469356 A0A1B0GU69 56 aa10.09□□□□□ -0.79
SREBF1-208ENST00000469356 MT1BP07438 61 aa10.05□□□□□ -0.8
SREBF1-208ENST00000469356 PRR15LQ9BU68 103 aa10.04□□□□□ -0.8
SREBF1-208ENST00000469356 LINC01554Q52M75 96 aa10.02□□□□□ -0.81
SREBF1-208ENST00000469356 SSPOA2VEC9 5147 aa10.01□□□□□ -0.81
SREBF1-208ENST00000469356 KRTAP19-6Q3LI70 58 aa9.99□□□□□ -0.81
SREBF1-208ENST00000469356 PLAC4Q8WY50 150 aa9.99□□□□□ -0.81
SREBF1-208ENST00000469356 A0A1B0GU33 70 aa9.98□□□□□ -0.81
SREBF1-208ENST00000469356 LINC01558Q9Y6Z2 57 aa9.97□□□□□ -0.81
SREBF1-208ENST00000469356 V9GYY9 64 aa9.88□□□□□ -0.83
SREBF1-208ENST00000469356 A6NN06 94 aa9.84□□□□□ -0.83
SREBF1-208ENST00000469356 KRTAP13-4Q3LI77 160 aa9.84□□□□□ -0.83
SREBF1-208ENST00000469356 RPS28P62857 69 aaKnown RBP9.82□□□□□ -0.84
SREBF1-208ENST00000469356 SMIM26A0A096LP01 95 aa9.8□□□□□ -0.84
SREBF1-208ENST00000469356 SPATA8Q6RVD6 105 aa9.78□□□□□ -0.84
SREBF1-208ENST00000469356 PRO2289Q9P1D8 64 aa9.76□□□□□ -0.85
SREBF1-208ENST00000469356 KRTAP10-5P60370 271 aa9.75□□□□□ -0.85
SREBF1-208ENST00000469356 Q1T7F1 81 aa9.74□□□□□ -0.85
SREBF1-208ENST00000469356 FCGBPQ9Y6R7 5405 aaPredicted RBP9.73□□□□□ -0.85
SREBF1-208ENST00000469356 A0A0D9SG42 100 aa9.71□□□□□ -0.86
SREBF1-208ENST00000469356 UQCR11O14957 56 aa9.67□□□□□ -0.86
SREBF1-208ENST00000469356 PSPHP1O15172 72 aa9.58□□□□□ -0.88
SREBF1-208ENST00000469356 SPINT4Q6UDR6 99 aa9.58□□□□□ -0.88
SREBF1-208ENST00000469356 CAMK2N1Q7Z7J9 78 aa9.57□□□□□ -0.88
SREBF1-208ENST00000469356 MT1XP80297 61 aa9.56□□□□□ -0.88
SREBF1-208ENST00000469356 A8MU10 97 aa9.52□□□□□ -0.89
SREBF1-208ENST00000469356 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.5□□□□□ -0.89
SREBF1-208ENST00000469356 KRTAP12-1P59990 96 aa9.49□□□□□ -0.89
SREBF1-208ENST00000469356 MIR22HGQ0VDD5 57 aa9.48□□□□□ -0.89
SREBF1-208ENST00000469356 KRTAP12-2P59991 146 aa9.41□□□□□ -0.9
SREBF1-208ENST00000469356 A6NED7 52 aa9.36□□□□□ -0.91
SREBF1-208ENST00000469356 K7ERS5 55 aa9.31□□□□□ -0.92
SREBF1-208ENST00000469356 MACF1Q9UPN3 7388 aaKnown RBP9.29□□□□□ -0.92
SREBF1-208ENST00000469356 KRTAP9-7A8MTY7 169 aa9.23□□□□□ -0.93
SREBF1-208ENST00000469356 KRTAP10-7P60409 375 aaPredicted RBP9.13□□□□□ -0.95
SREBF1-208ENST00000469356 KRTAP10-12P60413 245 aa9.13□□□□□ -0.95
SREBF1-208ENST00000469356 KRTAP6-3Q3LI67 103 aa9.13□□□□□ -0.95
SREBF1-208ENST00000469356 CDC42SE1Q9NRR8 79 aa9.06□□□□□ -0.96
SREBF1-208ENST00000469356 SYNE2Q8WXH0 6885 aaKnown RBP9.06□□□□□ -0.96
SREBF1-208ENST00000469356 KRTAP8-1Q8IUC2 63 aa9.02□□□□□ -0.97
SREBF1-208ENST00000469356 TNP1P09430 55 aa9.01□□□□□ -0.97
SREBF1-208ENST00000469356 C10orf95Q9H7T3 257 aa9.01□□□□□ -0.97
SREBF1-208ENST00000469356 KMT2DO14686 5537 aa8.94□□□□□ -0.98
SREBF1-208ENST00000469356 KRTAP4-8A0A0G2JLE6 195 aa8.93□□□□□ -0.98
SREBF1-208ENST00000469356 KRTAP4-8Q9BYQ9 185 aa8.93□□□□□ -0.98
SREBF1-208ENST00000469356 KRTAP5-9P26371 169 aa8.92□□□□□ -0.98
SREBF1-208ENST00000469356 SPRR2FQ96RM1 72 aa8.82□□□□□ -1
SREBF1-208ENST00000469356 KRTAP25-1Q3LHN0 102 aa8.79□□□□□ -1
SREBF1-208ENST00000469356 BRK1Q8WUW1 75 aa8.72□□□□□ -1.01
SREBF1-208ENST00000469356 ROMO1P60602 79 aa8.68□□□□□ -1.02
SREBF1-208ENST00000469356 MUC12Q9UKN1 5478 aa8.66□□□□□ -1.02
SREBF1-208ENST00000469356 LCE3AQ5TA76 89 aa8.62□□□□□ -1.03
SREBF1-208ENST00000469356 SPRR2EP22531 72 aa8.56□□□□□ -1.04
SREBF1-208ENST00000469356 SPRR2BP35325 72 aa8.56□□□□□ -1.04
SREBF1-208ENST00000469356 SPRR2AP35326 72 aa8.56□□□□□ -1.04
SREBF1-208ENST00000469356 KRTAP19-7Q3SYF9 63 aa8.54□□□□□ -1.04
SREBF1-208ENST00000469356 KRTAP23-1A1A580 65 aa8.51□□□□□ -1.05
SREBF1-208ENST00000469356 KRTAP19-5Q3LI72 72 aa8.51□□□□□ -1.05
SREBF1-208ENST00000469356 MDN1Q9NU22 5596 aa8.5□□□□□ -1.05
SREBF1-208ENST00000469356 NEBP20929 6669 aa8.48□□□□□ -1.05
SREBF1-208ENST00000469356 LCE1AQ5T7P2 110 aa8.48□□□□□ -1.05
SREBF1-208ENST00000469356 MT1EP04732 61 aa8.46□□□□□ -1.06
SREBF1-208ENST00000469356 PP632Q6XCG6 107 aa8.36□□□□□ -1.07
SREBF1-208ENST00000469356 KRTAP12-3P60328 96 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms