RNA–Protein interactions for RNA: ENST00000466763.5

UBA3-209, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-209ENST00000466763 SCGB1A1P11684 91 aa6.82□□□□□ -1.32
UBA3-209ENST00000466763 MT-ATP8P03928 68 aa6.81□□□□□ -1.32
UBA3-209ENST00000466763 CYP4F30PQ9H0H9 118 aa6.81□□□□□ -1.32
UBA3-209ENST00000466763 ATOX1O00244 68 aa6.8□□□□□ -1.32
UBA3-209ENST00000466763 IMUPQ9GZP8 106 aa6.78□□□□□ -1.32
UBA3-209ENST00000466763 C1orf64Q8NEQ6 169 aa6.77□□□□□ -1.33
UBA3-209ENST00000466763 OCR1Q9BZK8 76 aa6.77□□□□□ -1.33
UBA3-209ENST00000466763 MP68P56378 58 aa6.76□□□□□ -1.33
UBA3-209ENST00000466763 LINC00208Q96KT6 92 aa6.76□□□□□ -1.33
UBA3-209ENST00000466763 C5orf47Q569G3 176 aa6.72□□□□□ -1.33
UBA3-209ENST00000466763 KRTAP3-1Q9BYR8 98 aa6.72□□□□□ -1.33
UBA3-209ENST00000466763 FAM236AA0A1B0GUQ0 79 aa6.7□□□□□ -1.34
UBA3-209ENST00000466763 FAM236BA0A1B0GV22 79 aa6.7□□□□□ -1.34
UBA3-209ENST00000466763 MT2AP02795 61 aa6.67□□□□□ -1.34
UBA3-209ENST00000466763 S4R3F8 94 aa6.67□□□□□ -1.34
UBA3-209ENST00000466763 H3BPC8 53 aa6.65□□□□□ -1.34
UBA3-209ENST00000466763 KRTAP10-10P60014 251 aa6.65□□□□□ -1.34
UBA3-209ENST00000466763 KLKP1Q107X0 134 aa6.65□□□□□ -1.34
UBA3-209ENST00000466763 SMIM20Q8N5G0 67 aa6.64□□□□□ -1.35
UBA3-209ENST00000466763 TRAV7A0A075B6U4 112 aa6.62□□□□□ -1.35
UBA3-209ENST00000466763 MT1FP04733 61 aa6.61□□□□□ -1.35
UBA3-209ENST00000466763 LCA10Q71F78 164 aa6.61□□□□□ -1.35
UBA3-209ENST00000466763 CSAG1Q6PB30 78 aa6.59□□□□□ -1.35
UBA3-209ENST00000466763 A8MUN3 132 aa6.55□□□□□ -1.36
UBA3-209ENST00000466763 NDUFC1O43677 76 aa6.5□□□□□ -1.37
UBA3-209ENST00000466763 SERP2Q8N6R1 65 aa6.49□□□□□ -1.37
UBA3-209ENST00000466763 SNURFQ9Y675 71 aa6.49□□□□□ -1.37
UBA3-209ENST00000466763 C20orf197Q8N268 126 aa6.46□□□□□ -1.38
UBA3-209ENST00000466763 DMAC1Q96GE9 116 aa6.45□□□□□ -1.38
UBA3-209ENST00000466763 CRCT1Q9UGL9 99 aa6.45□□□□□ -1.38
UBA3-209ENST00000466763 FSIP2Q5CZC0 6907 aa6.4□□□□□ -1.38
UBA3-209ENST00000466763 ACYP2P14621 99 aa6.39□□□□□ -1.39
UBA3-209ENST00000466763 COX7CP15954 63 aa6.36□□□□□ -1.39
UBA3-209ENST00000466763 USH2AO75445 5202 aa6.35□□□□□ -1.39
UBA3-209ENST00000466763 CHKB-CPT1BH3BT56 60 aa6.32□□□□□ -1.4
UBA3-209ENST00000466763 ADM2Q7Z4H4 148 aa6.32□□□□□ -1.4
UBA3-209ENST00000466763 SPANXA2-OT1Q8N9U9 137 aa6.31□□□□□ -1.4
UBA3-209ENST00000466763 ANAPC13Q9BS18 74 aa6.31□□□□□ -1.4
UBA3-209ENST00000466763 H0YAA0 97 aa6.29□□□□□ -1.4
UBA3-209ENST00000466763 SPTSSBQ8NFR3 76 aa6.27□□□□□ -1.41
UBA3-209ENST00000466763 CRIPTQ9P021 101 aa6.25□□□□□ -1.41
UBA3-209ENST00000466763 SPRR2GQ9BYE4 73 aa6.23□□□□□ -1.41
UBA3-209ENST00000466763 SSPOA2VEC9 5147 aa6.22□□□□□ -1.41
UBA3-209ENST00000466763 CYSTM1Q9H1C7 97 aa6.2□□□□□ -1.42
UBA3-209ENST00000466763 H7BZZ5 65 aa6.19□□□□□ -1.42
UBA3-209ENST00000466763 P0C880 135 aa6.19□□□□□ -1.42
UBA3-209ENST00000466763 Q5VV11 94 aa6.19□□□□□ -1.42
UBA3-209ENST00000466763 CCDC179H3BU77 68 aa6.16□□□□□ -1.42
UBA3-209ENST00000466763 COA5Q86WW8 74 aa6.16□□□□□ -1.42
UBA3-209ENST00000466763 KRTAP19-8Q3LI54 63 aa6.15□□□□□ -1.42
UBA3-209ENST00000466763 R4GN34 69 aa6.14□□□□□ -1.43
UBA3-209ENST00000466763 KRTAP19-6Q3LI70 58 aa6.13□□□□□ -1.43
UBA3-209ENST00000466763 MT1BP07438 61 aa6.12□□□□□ -1.43
UBA3-209ENST00000466763 M0QZ58 72 aa6.11□□□□□ -1.43
UBA3-209ENST00000466763 FCGBPQ9Y6R7 5405 aaPredicted RBP6.08□□□□□ -1.44
UBA3-209ENST00000466763 LINC01554Q52M75 96 aa6.05□□□□□ -1.44
UBA3-209ENST00000466763 A6NN06 94 aa6.02□□□□□ -1.45
UBA3-209ENST00000466763 KRTAP15-1Q3LI76 137 aa6.02□□□□□ -1.45
UBA3-209ENST00000466763 PLAC4Q8WY50 150 aa6□□□□□ -1.45
UBA3-209ENST00000466763 SEC61GP60059 68 aa5.99□□□□□ -1.45
UBA3-209ENST00000466763 SERP1Q9Y6X1 66 aa5.98□□□□□ -1.45
UBA3-209ENST00000466763 ATP5EP56381 51 aaPredicted RBP5.97□□□□□ -1.45
UBA3-209ENST00000466763 KRTAP23-1A1A580 65 aa5.96□□□□□ -1.46
UBA3-209ENST00000466763 KRTAP10-5P60370 271 aa5.94□□□□□ -1.46
UBA3-209ENST00000466763 TMEM258P61165 79 aa5.92□□□□□ -1.46
UBA3-209ENST00000466763 KRTAP13-4Q3LI77 160 aa5.87□□□□□ -1.47
UBA3-209ENST00000466763 A0A1B0GU69 56 aa5.86□□□□□ -1.47
UBA3-209ENST00000466763 PRO2289Q9P1D8 64 aa5.85□□□□□ -1.47
UBA3-209ENST00000466763 A0A1B0GU33 70 aa5.84□□□□□ -1.47
UBA3-209ENST00000466763 MT1XP80297 61 aa5.8□□□□□ -1.48
UBA3-209ENST00000466763 SPATA8Q6RVD6 105 aa5.8□□□□□ -1.48
UBA3-209ENST00000466763 A0A0D9SG42 100 aa5.79□□□□□ -1.48
UBA3-209ENST00000466763 MACF1Q9UPN3 7388 aaKnown RBP5.79□□□□□ -1.48
UBA3-209ENST00000466763 PRR15LQ9BU68 103 aa5.76□□□□□ -1.49
UBA3-209ENST00000466763 LINC01558Q9Y6Z2 57 aa5.73□□□□□ -1.49
UBA3-209ENST00000466763 SYNE2Q8WXH0 6885 aaKnown RBP5.72□□□□□ -1.49
UBA3-209ENST00000466763 CAMK2N1Q7Z7J9 78 aa5.71□□□□□ -1.5
UBA3-209ENST00000466763 SPINT4Q6UDR6 99 aa5.7□□□□□ -1.5
UBA3-209ENST00000466763 PCP4P48539 62 aa5.69□□□□□ -1.5
UBA3-209ENST00000466763 SMIM26A0A096LP01 95 aa5.68□□□□□ -1.5
UBA3-209ENST00000466763 KRTAP6-3Q3LI67 103 aa5.67□□□□□ -1.5
UBA3-209ENST00000466763 A8MU10 97 aa5.64□□□□□ -1.51
UBA3-209ENST00000466763 KRTAP12-1P59990 96 aa5.61□□□□□ -1.51
UBA3-209ENST00000466763 KRTAP12-2P59991 146 aa5.59□□□□□ -1.51
UBA3-209ENST00000466763 KRTAP10-7P60409 375 aaPredicted RBP5.57□□□□□ -1.52
UBA3-209ENST00000466763 UQCR11O14957 56 aa5.56□□□□□ -1.52
UBA3-209ENST00000466763 V9GYY9 64 aa5.56□□□□□ -1.52
UBA3-209ENST00000466763 PSPHP1O15172 72 aa5.53□□□□□ -1.52
UBA3-209ENST00000466763 KMT2DO14686 5537 aa5.52□□□□□ -1.53
UBA3-209ENST00000466763 KRTAP8-1Q8IUC2 63 aa5.52□□□□□ -1.53
UBA3-209ENST00000466763 KRTAP10-12P60413 245 aa5.51□□□□□ -1.53
UBA3-209ENST00000466763 Q1T7F1 81 aa5.51□□□□□ -1.53
UBA3-209ENST00000466763 KRTAP5-9P26371 169 aa5.48□□□□□ -1.53
UBA3-209ENST00000466763 MIR22HGQ0VDD5 57 aa5.47□□□□□ -1.53
UBA3-209ENST00000466763 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.46□□□□□ -1.54
UBA3-209ENST00000466763 SPRR2FQ96RM1 72 aa5.46□□□□□ -1.54
UBA3-209ENST00000466763 RPS28P62857 69 aaKnown RBP5.45□□□□□ -1.54
UBA3-209ENST00000466763 MUC12Q9UKN1 5478 aa5.4□□□□□ -1.54
UBA3-209ENST00000466763 A6NED7 52 aa5.37□□□□□ -1.55
UBA3-209ENST00000466763 K7ERS5 55 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms