RNA–Protein interactions for RNA: ENST00000466763.5

UBA3-209, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-209ENST00000466763 NISCHQ9Y2I1 1504 aa33.18■■■□□ 2.9
UBA3-209ENST00000466763 AEBP2Q6ZN18 517 aaPredicted RBP30.3■■■□□ 2.44
UBA3-209ENST00000466763 CCDC180Q9P1Z9 1646 aa29.38■■■□□ 2.29
UBA3-209ENST00000466763 ABCC9O60706 1549 aa28.71■■■□□ 2.19
UBA3-209ENST00000466763 CHIC1Q5VXU3 224 aa28.45■■■□□ 2.14
UBA3-209ENST00000466763 DCAF8L2P0C7V8 631 aa27.9■■■□□ 2.06
UBA3-209ENST00000466763 ZCCHC6Q5VYS8 1495 aaKnown RBP27.64■■■□□ 2.02
UBA3-209ENST00000466763 RB1CC1Q8TDY2 1594 aa27.62■■■□□ 2.01
UBA3-209ENST00000466763 NACADO15069 1562 aa27.6■■■□□ 2.01
UBA3-209ENST00000466763 MYO15BQ96JP2 1530 aa27.41■■□□□ 1.98
UBA3-209ENST00000466763 DCAF1Q9Y4B6 1507 aa27.38■■□□□ 1.97
UBA3-209ENST00000466763 UNC13AQ9UPW8 1703 aa26.99■■□□□ 1.91
UBA3-209ENST00000466763 SCRIBQ14160 1630 aa26.93■■□□□ 1.9
UBA3-209ENST00000466763 PABPN1Q86U42 306 aaKnown RBP eCLIP26.92■■□□□ 1.9
UBA3-209ENST00000466763 BICRAQ9NZM4 1560 aa26.74■■□□□ 1.87
UBA3-209ENST00000466763 SHROOM4Q9ULL8 1493 aa26.49■■□□□ 1.83
UBA3-209ENST00000466763 DNAJC5BQ9UF47 199 aa26.18■■□□□ 1.78
UBA3-209ENST00000466763 EIF4G1Q04637 1599 aaKnown RBP26.05■■□□□ 1.76
UBA3-209ENST00000466763 SENP3Q9H4L4 574 aaPredicted RBP26.01■■□□□ 1.75
UBA3-209ENST00000466763 CC2D2AQ9P2K1 1620 aa25.92■■□□□ 1.74
UBA3-209ENST00000466763 CECR2Q9BXF3 1484 aa25.87■■□□□ 1.73
UBA3-209ENST00000466763 BAZ1AQ9NRL2 1556 aaPredicted RBP25.71■■□□□ 1.71
UBA3-209ENST00000466763 SMARCA4P51532 1647 aa25.7■■□□□ 1.71
UBA3-209ENST00000466763 PHF23Q9BUL5 403 aaPredicted RBP25.61■■□□□ 1.69
UBA3-209ENST00000466763 MROH2BQ7Z745 1585 aa25.61■■□□□ 1.69
UBA3-209ENST00000466763 ATAD2BQ9ULI0 1458 aa25.53■■□□□ 1.68
UBA3-209ENST00000466763 SMARCA2P51531 1590 aa25.51■■□□□ 1.67
UBA3-209ENST00000466763 NCAPD3P42695 1498 aa25.46■■□□□ 1.67
UBA3-209ENST00000466763 PEG3Q9GZU2 1588 aa25.38■■□□□ 1.65
UBA3-209ENST00000466763 RSF1Q96T23 1441 aaPredicted RBP25.37■■□□□ 1.65
UBA3-209ENST00000466763 BAZ1BQ9UIG0 1483 aaKnown RBP25.36■■□□□ 1.65
UBA3-209ENST00000466763 WIZO95785 1651 aa25.36■■□□□ 1.65
UBA3-209ENST00000466763 HMGXB3Q12766 1538 aa25.33■■□□□ 1.65
UBA3-209ENST00000466763 TOP2AP11388 1531 aaKnown RBP25.06■■□□□ 1.6
UBA3-209ENST00000466763 SUPT5HO00267 1087 aaKnown RBP25.04■■□□□ 1.6
UBA3-209ENST00000466763 NESP48681 1621 aa24.87■■□□□ 1.57
UBA3-209ENST00000466763 CCDC88BA6NC98 1476 aa24.79■■□□□ 1.56
UBA3-209ENST00000466763 CADPSQ9ULU8 1353 aa24.78■■□□□ 1.56
UBA3-209ENST00000466763 LAMC3Q9Y6N6 1575 aa24.77■■□□□ 1.56
UBA3-209ENST00000466763 ERCC6Q03468 1493 aa24.76■■□□□ 1.55
UBA3-209ENST00000466763 PDS5BQ9NTI5 1447 aa24.65■■□□□ 1.54
UBA3-209ENST00000466763 CFTRP13569 1480 aa24.63■■□□□ 1.53
UBA3-209ENST00000466763 KIF21AQ7Z4S6 1674 aa24.56■■□□□ 1.52
UBA3-209ENST00000466763 FANCD2Q9BXW9 1451 aa24.51■■□□□ 1.51
UBA3-209ENST00000466763 CEP164Q9UPV0 1460 aa24.46■■□□□ 1.51
UBA3-209ENST00000466763 PRDM2Q13029 1718 aa24.46■■□□□ 1.51
UBA3-209ENST00000466763 MRC2Q9UBG0 1479 aa24.38■■□□□ 1.49
UBA3-209ENST00000466763 THOC2Q8NI27 1593 aaKnown RBP24.37■■□□□ 1.49
UBA3-209ENST00000466763 CUX2O14529 1486 aa24.32■■□□□ 1.48
UBA3-209ENST00000466763 WDR62O43379 1518 aa24.24■■□□□ 1.47
UBA3-209ENST00000466763 FOXD1Q16676 465 aa24.23■■□□□ 1.47
UBA3-209ENST00000466763 URB2Q14146 1524 aaKnown RBP24.23■■□□□ 1.47
UBA3-209ENST00000466763 TOPBP1Q92547 1522 aa24.12■■□□□ 1.45
UBA3-209ENST00000466763 ABCC8Q09428 1581 aa24.11■■□□□ 1.45
UBA3-209ENST00000466763 DNMBPQ6XZF7 1577 aa24.09■■□□□ 1.45
UBA3-209ENST00000466763 CUX1P39880 1505 aa24■■□□□ 1.43
UBA3-209ENST00000466763 WRNQ14191 1432 aaPredicted RBP eCLIP23.94■■□□□ 1.42
UBA3-209ENST00000466763 IFT140Q96RY7 1462 aa23.93■■□□□ 1.42
UBA3-209ENST00000466763 POLA1P09884 1462 aaPredicted RBP23.92■■□□□ 1.42
UBA3-209ENST00000466763 FGD5Q6ZNL6 1462 aa23.91■■□□□ 1.42
UBA3-209ENST00000466763 SOGA1O94964 1423 aa23.87■■□□□ 1.41
UBA3-209ENST00000466763 RAD54L2Q9Y4B4 1467 aa23.87■■□□□ 1.41
UBA3-209ENST00000466763 SYNJ1O43426 1573 aa23.84■■□□□ 1.41
UBA3-209ENST00000466763 TOP2BQ02880 1626 aa23.82■■□□□ 1.4
UBA3-209ENST00000466763 ZNF608Q9ULD9 1512 aaPredicted RBP23.82■■□□□ 1.4
UBA3-209ENST00000466763 TARBP1Q13395 1621 aaKnown RBP23.81■■□□□ 1.4
UBA3-209ENST00000466763 BIVM-ERCC5R4GMW8 1640 aa23.81■■□□□ 1.4
UBA3-209ENST00000466763 TDRD9Q8NDG6 1382 aaKnown RBP23.75■■□□□ 1.39
UBA3-209ENST00000466763 AQRO60306 1485 aaKnown RBP eCLIP23.74■■□□□ 1.391e-9■■■■■ 37.7
UBA3-209ENST00000466763 EIF4G3O43432 1585 aaKnown RBP23.7■■□□□ 1.38
UBA3-209ENST00000466763 ABCA10Q8WWZ4 1543 aa23.64■■□□□ 1.38
UBA3-209ENST00000466763 WDR97A6NE52 1622 aa23.63■■□□□ 1.37
UBA3-209ENST00000466763 TRIM41Q8WV44 630 aa23.6■■□□□ 1.37
UBA3-209ENST00000466763 GAPVD1Q14C86 1478 aa23.58■■□□□ 1.37
UBA3-209ENST00000466763 GRIN2BQ13224 1484 aa23.55■■□□□ 1.36
UBA3-209ENST00000466763 FBLN2P98095 1184 aa23.54■■□□□ 1.36
UBA3-209ENST00000466763 ABCA5Q8WWZ7 1642 aa23.52■■□□□ 1.36
UBA3-209ENST00000466763 PBRM1Q86U86 1689 aa23.51■■□□□ 1.35
UBA3-209ENST00000466763 SNAPC4Q5SXM2 1469 aa23.5■■□□□ 1.35
UBA3-209ENST00000466763 OSCARQ8IYS5 282 aa23.45■■□□□ 1.34
UBA3-209ENST00000466763 CHMP7Q8WUX9 453 aaPredicted RBP23.45■■□□□ 1.34
UBA3-209ENST00000466763 MAGI1Q96QZ7 1491 aaPredicted RBP23.43■■□□□ 1.34
UBA3-209ENST00000466763 KIF27Q86VH2 1401 aa23.43■■□□□ 1.34
UBA3-209ENST00000466763 DNAJC5Q9H3Z4 198 aa23.43■■□□□ 1.34
UBA3-209ENST00000466763 CHD1O14646 1710 aa23.41■■□□□ 1.34
UBA3-209ENST00000466763 ERICH3Q5RHP9 1530 aa23.36■■□□□ 1.33
UBA3-209ENST00000466763 SYNJ2O15056 1496 aa23.36■■□□□ 1.33
UBA3-209ENST00000466763 FHAD1B1AJZ9 1412 aa23.31■■□□□ 1.32
UBA3-209ENST00000466763 ADAMTS12P58397 1594 aa23.3■■□□□ 1.32
UBA3-209ENST00000466763 IGF1RP08069 1367 aa23.29■■□□□ 1.32
UBA3-209ENST00000466763 RUSC2Q8N2Y8 1516 aa23.29■■□□□ 1.32
UBA3-209ENST00000466763 GRIN2AQ12879 1464 aa23.23■■□□□ 1.31
UBA3-209ENST00000466763 CUL7Q14999 1698 aa23.2■■□□□ 1.3
UBA3-209ENST00000466763 CARMIL1Q5VZK9 1371 aa23.2■■□□□ 1.3
UBA3-209ENST00000466763 FAM9AQ8IZU1 332 aaPredicted RBP23.18■■□□□ 1.3
UBA3-209ENST00000466763 CEP170Q5SW79 1584 aa23.1■■□□□ 1.29
UBA3-209ENST00000466763 CSRNP3Q8WYN3 585 aa23.1■■□□□ 1.29
UBA3-209ENST00000466763 NUP160Q12769 1436 aa23.08■■□□□ 1.29
UBA3-209ENST00000466763 CLASP1Q7Z460 1538 aa23.08■■□□□ 1.29
UBA3-209ENST00000466763 EEA1Q15075 1411 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms