RNA–Protein interactions for RNA: ENST00000466373.1

UFD1-206, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 3,059 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-206ENST00000466373 KRTAP17-1Q9BYP8 105 aa5.47□□□□□ -1.53
UFD1-206ENST00000466373 COX6B2Q6YFQ2 88 aa5.45□□□□□ -1.54
UFD1-206ENST00000466373 H0YAA0 97 aa5.44□□□□□ -1.54
UFD1-206ENST00000466373 LPAP08519 4548 aa5.43□□□□□ -1.54
UFD1-206ENST00000466373 A0A1B0GU33 70 aa5.42□□□□□ -1.54
UFD1-206ENST00000466373 EPPK1P58107 5090 aaKnown RBP5.41□□□□□ -1.54
UFD1-206ENST00000466373 XP32Q5T750 250 aa5.41□□□□□ -1.54
UFD1-206ENST00000466373 RPL37P61927 97 aaKnown RBP5.39□□□□□ -1.55
UFD1-206ENST00000466373 LRP2P98164 4655 aa5.39□□□□□ -1.55
UFD1-206ENST00000466373 H1FX-AS1Q4G0G2 97 aa5.38□□□□□ -1.55
UFD1-206ENST00000466373 MT1HL1P0DM35 61 aa5.34□□□□□ -1.55
UFD1-206ENST00000466373 ABCA13Q86UQ4 5058 aa5.33□□□□□ -1.56
UFD1-206ENST00000466373 KRTAP3-3Q9BYR6 98 aa5.33□□□□□ -1.56
UFD1-206ENST00000466373 CSAG1Q6PB30 78 aa5.31□□□□□ -1.56
UFD1-206ENST00000466373 S4R3F8 94 aa5.29□□□□□ -1.56
UFD1-206ENST00000466373 KRTAP10-6P60371 365 aaPredicted RBP5.27□□□□□ -1.57
UFD1-206ENST00000466373 A0A0D9SG42 100 aa5.25□□□□□ -1.57
UFD1-206ENST00000466373 KRTAP13-4Q3LI77 160 aa5.24□□□□□ -1.57
UFD1-206ENST00000466373 KRTAP3-2Q9BYR7 98 aa5.23□□□□□ -1.57
UFD1-206ENST00000466373 KRTAP4-5Q9BYR2 181 aa5.22□□□□□ -1.57
UFD1-206ENST00000466373 P0C880 135 aa5.22□□□□□ -1.57
UFD1-206ENST00000466373 LINC01554Q52M75 96 aa5.21□□□□□ -1.58
UFD1-206ENST00000466373 K7ERS5 55 aa5.2□□□□□ -1.58
UFD1-206ENST00000466373 CRIPTQ9P021 101 aa5.2□□□□□ -1.58
UFD1-206ENST00000466373 TPRXLQ17RH7 258 aa5.17□□□□□ -1.58
UFD1-206ENST00000466373 HERC2O95714 4834 aa5.12□□□□□ -1.59
UFD1-206ENST00000466373 KRTAP25-1Q3LHN0 102 aa5.12□□□□□ -1.59
UFD1-206ENST00000466373 ROMO1P60602 79 aa5.08□□□□□ -1.6
UFD1-206ENST00000466373 MUC17Q685J3 4493 aa5.08□□□□□ -1.6
UFD1-206ENST00000466373 KRTAP12-2P59991 146 aa5.06□□□□□ -1.6
UFD1-206ENST00000466373 SPINT4Q6UDR6 99 aa5.06□□□□□ -1.6
UFD1-206ENST00000466373 MUC2Q02817 5179 aa5.05□□□□□ -1.6
UFD1-206ENST00000466373 J3QL48 77 aa5.03□□□□□ -1.6
UFD1-206ENST00000466373 KRTAP12-1P59990 96 aa5□□□□□ -1.61
UFD1-206ENST00000466373 SEC61BP60468 96 aaKnown RBP5□□□□□ -1.61
UFD1-206ENST00000466373 KRTAP4-1Q9BYQ7 146 aa5□□□□□ -1.61
UFD1-206ENST00000466373 C10orf95Q9H7T3 257 aa4.99□□□□□ -1.61
UFD1-206ENST00000466373 M0QZ58 72 aa4.96□□□□□ -1.61
UFD1-206ENST00000466373 HERC1Q15751 4861 aa4.94□□□□□ -1.62
UFD1-206ENST00000466373 R4GN34 69 aa4.93□□□□□ -1.62
UFD1-206ENST00000466373 LORP23490 312 aaPredicted RBP4.92□□□□□ -1.62
UFD1-206ENST00000466373 BIRC6Q9NR09 4857 aa4.9□□□□□ -1.63
UFD1-206ENST00000466373 PCLOQ9Y6V0 5065 aa4.86□□□□□ -1.63
UFD1-206ENST00000466373 KRTAP19-2Q3LHN2 52 aa4.84□□□□□ -1.63
UFD1-206ENST00000466373 FAT4Q6V0I7 4981 aa4.81□□□□□ -1.64
UFD1-206ENST00000466373 FLGP20930 4061 aaPredicted RBP4.81□□□□□ -1.64
UFD1-206ENST00000466373 HMCN2Q8NDA2 5059 aa4.79□□□□□ -1.64
UFD1-206ENST00000466373 RNF213Q63HN8 5207 aa4.72□□□□□ -1.65
UFD1-206ENST00000466373 H3BS24 57 aa4.7□□□□□ -1.66
UFD1-206ENST00000466373 CAMK2N1Q7Z7J9 78 aa4.69□□□□□ -1.66
UFD1-206ENST00000466373 UBR4Q5T4S7 5183 aa4.65□□□□□ -1.67
UFD1-206ENST00000466373 KRTAP15-1Q3LI76 137 aa4.64□□□□□ -1.67
UFD1-206ENST00000466373 LCE2CQ5TA81 110 aa4.59□□□□□ -1.67
UFD1-206ENST00000466373 LCE2DQ5TA82 110 aaPredicted RBP4.59□□□□□ -1.68
UFD1-206ENST00000466373 NDUFAF8A1L188 74 aa4.57□□□□□ -1.68
UFD1-206ENST00000466373 M0R2T5 61 aa4.57□□□□□ -1.68
UFD1-206ENST00000466373 PLAC4Q8WY50 150 aa4.51□□□□□ -1.69
UFD1-206ENST00000466373 MT1HP80294 61 aa4.48□□□□□ -1.69
UFD1-206ENST00000466373 TNP1P09430 55 aa4.46□□□□□ -1.7
UFD1-206ENST00000466373 PP632Q6XCG6 107 aa4.46□□□□□ -1.7
UFD1-206ENST00000466373 KRTAP19-1Q8IUB9 90 aa4.46□□□□□ -1.7
UFD1-206ENST00000466373 SPRR2GQ9BYE4 73 aa4.44□□□□□ -1.7
UFD1-206ENST00000466373 KRTAP10-10P60014 251 aa4.43□□□□□ -1.7
UFD1-206ENST00000466373 MT1FP04733 61 aa4.41□□□□□ -1.7
UFD1-206ENST00000466373 MT2AP02795 61 aa4.4□□□□□ -1.71
UFD1-206ENST00000466373 KRTAP9-8Q9BYQ0 159 aa4.37□□□□□ -1.71
UFD1-206ENST00000466373 LUZP6Q538Z0 58 aa4.28□□□□□ -1.72
UFD1-206ENST00000466373 KRTAP23-1A1A580 65 aa4.28□□□□□ -1.72
UFD1-206ENST00000466373 LCE3AQ5TA76 89 aa4.27□□□□□ -1.73
UFD1-206ENST00000466373 MT1BP07438 61 aa4.23□□□□□ -1.73
UFD1-206ENST00000466373 KRTAP19-8Q3LI54 63 aa4.23□□□□□ -1.73
UFD1-206ENST00000466373 KRTAP10-5P60370 271 aa4.2□□□□□ -1.74
UFD1-206ENST00000466373 MT1XP80297 61 aa4.2□□□□□ -1.74
UFD1-206ENST00000466373 USH2AO75445 5202 aa4.19□□□□□ -1.74
UFD1-206ENST00000466373 KRTAP9-3Q9BYQ3 159 aa4.17□□□□□ -1.74
UFD1-206ENST00000466373 SPRR5A0A1B0GTR4 108 aa4.13□□□□□ -1.75
UFD1-206ENST00000466373 KRTAP10-7P60409 375 aaPredicted RBP4.1□□□□□ -1.75
UFD1-206ENST00000466373 KRTAP10-12P60413 245 aa4.1□□□□□ -1.75
UFD1-206ENST00000466373 KRTAP8-1Q8IUC2 63 aa4.1□□□□□ -1.75
UFD1-206ENST00000466373 KMT2DO14686 5537 aa4.09□□□□□ -1.75
UFD1-206ENST00000466373 KRTAP12-3P60328 96 aa4.05□□□□□ -1.76
UFD1-206ENST00000466373 LCE2BO14633 110 aa4.05□□□□□ -1.76
UFD1-206ENST00000466373 PRO2289Q9P1D8 64 aa4.02□□□□□ -1.77
UFD1-206ENST00000466373 A0A0A0MQY5 61 aa3.99□□□□□ -1.77
UFD1-206ENST00000466373 LCE2AQ5TA79 106 aaPredicted RBP3.96□□□□□ -1.77
UFD1-206ENST00000466373 FSIP2Q5CZC0 6907 aa3.92□□□□□ -1.78
UFD1-206ENST00000466373 KRTAP19-5Q3LI72 72 aa3.91□□□□□ -1.78
UFD1-206ENST00000466373 KRTAP4-8A0A0G2JLE6 195 aa3.91□□□□□ -1.78
UFD1-206ENST00000466373 KRTAP4-8Q9BYQ9 185 aa3.91□□□□□ -1.78
UFD1-206ENST00000466373 SSPOA2VEC9 5147 aa3.82□□□□□ -1.8
UFD1-206ENST00000466373 LCE3CQ5T5A8 94 aa3.79□□□□□ -1.8
UFD1-206ENST00000466373 KRTAP19-7Q3SYF9 63 aa3.74□□□□□ -1.81
UFD1-206ENST00000466373 KRTAP4-7Q9BYR0 210 aa3.73□□□□□ -1.81
UFD1-206ENST00000466373 KRTAP9-6A8MVA2 160 aa3.69□□□□□ -1.82
UFD1-206ENST00000466373 MT1EP04732 61 aa3.62□□□□□ -1.83
UFD1-206ENST00000466373 MUC12Q9UKN1 5478 aa3.62□□□□□ -1.83
UFD1-206ENST00000466373 FCGBPQ9Y6R7 5405 aaPredicted RBP3.62□□□□□ -1.83
UFD1-206ENST00000466373 MT1LQ93083 61 aa3.61□□□□□ -1.83
UFD1-206ENST00000466373 KRTAP19-6Q3LI70 58 aa3.59□□□□□ -1.84
UFD1-206ENST00000466373 INE1O15225 51 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms