RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 RPL37P61927 97 aaKnown RBP2.93□□□□□ -1.94
VPS41-211ENST00000466017 ZCCHC13Q8WW36 166 aaKnown RBP2.93□□□□□ -1.94
VPS41-211ENST00000466017 ANAPC13Q9BS18 74 aa2.93□□□□□ -1.94
VPS41-211ENST00000466017 TRAV22A0A0B4J277 110 aa2.92□□□□□ -1.94
VPS41-211ENST00000466017 NDUFS5O43920 106 aa2.92□□□□□ -1.94
VPS41-211ENST00000466017 MP68P56378 58 aa2.91□□□□□ -1.94
VPS41-211ENST00000466017 KLKP1Q107X0 134 aa2.91□□□□□ -1.94
VPS41-211ENST00000466017 Q5W150 140 aa2.91□□□□□ -1.94
VPS41-211ENST00000466017 ATP11AUNQ6ZP68 121 aa2.91□□□□□ -1.94
VPS41-211ENST00000466017 A0A0U1RQV1 116 aa2.9□□□□□ -1.95
VPS41-211ENST00000466017 LOC101927531A0A1B0GV80 90 aa2.9□□□□□ -1.95
VPS41-211ENST00000466017 H0Y9P7 68 aa2.9□□□□□ -1.95
VPS41-211ENST00000466017 MUC17Q685J3 4493 aa2.89□□□□□ -1.95
VPS41-211ENST00000466017 NDUFAF8A1L188 74 aa2.89□□□□□ -1.95
VPS41-211ENST00000466017 NDUFC1O43677 76 aa2.89□□□□□ -1.95
VPS41-211ENST00000466017 LCE3EQ5T5B0 92 aa2.89□□□□□ -1.95
VPS41-211ENST00000466017 KRTAP5-9P26371 169 aa2.88□□□□□ -1.95
VPS41-211ENST00000466017 C1orf64Q8NEQ6 169 aa2.88□□□□□ -1.95
VPS41-211ENST00000466017 LINC00208Q96KT6 92 aa2.88□□□□□ -1.95
VPS41-211ENST00000466017 CYP4F30PQ9H0H9 118 aa2.88□□□□□ -1.95
VPS41-211ENST00000466017 HERC1Q15751 4861 aa2.88□□□□□ -1.95
VPS41-211ENST00000466017 C20orf197Q8N268 126 aa2.87□□□□□ -1.95
VPS41-211ENST00000466017 LRP2P98164 4655 aa2.87□□□□□ -1.95
VPS41-211ENST00000466017 CCDC179H3BU77 68 aa2.86□□□□□ -1.95
VPS41-211ENST00000466017 KRTAP5-4Q6L8H1 288 aa2.86□□□□□ -1.95
VPS41-211ENST00000466017 C7orf65Q6ZTY9 151 aa2.86□□□□□ -1.95
VPS41-211ENST00000466017 LPAP08519 4548 aa2.85□□□□□ -1.95
VPS41-211ENST00000466017 SPINK7P58062 85 aa2.85□□□□□ -1.95
VPS41-211ENST00000466017 PCOTHQ58A44 107 aa2.85□□□□□ -1.95
VPS41-211ENST00000466017 SPANXA2-OT1Q8N9U9 137 aa2.85□□□□□ -1.95
VPS41-211ENST00000466017 HMCN2Q8NDA2 5059 aa2.85□□□□□ -1.95
VPS41-211ENST00000466017 H7BZZ5 65 aa2.84□□□□□ -1.95
VPS41-211ENST00000466017 SNURFQ9Y675 71 aa2.84□□□□□ -1.95
VPS41-211ENST00000466017 KRTAP4-4Q9BYR3 166 aa2.83□□□□□ -1.96
VPS41-211ENST00000466017 HRES1P13985 223 aa2.81□□□□□ -1.96
VPS41-211ENST00000466017 A8MUN3 132 aa2.8□□□□□ -1.96
VPS41-211ENST00000466017 ATP5EP56381 51 aaPredicted RBP2.8□□□□□ -1.96
VPS41-211ENST00000466017 TMEM258P61165 79 aa2.8□□□□□ -1.96
VPS41-211ENST00000466017 CYSTM1Q9H1C7 97 aa2.8□□□□□ -1.96
VPS41-211ENST00000466017 COX6B2Q6YFQ2 88 aa2.79□□□□□ -1.96
VPS41-211ENST00000466017 KRTAP4-1Q9BYQ7 146 aa2.78□□□□□ -1.96
VPS41-211ENST00000466017 ACYP2P14621 99 aa2.77□□□□□ -1.97
VPS41-211ENST00000466017 DMAC1Q96GE9 116 aa2.77□□□□□ -1.97
VPS41-211ENST00000466017 RBM12B-AS1Q9P1G2 102 aa2.77□□□□□ -1.97
VPS41-211ENST00000466017 FAM236DA0A1B0GTK5 79 aa2.75□□□□□ -1.97
VPS41-211ENST00000466017 FAM236CP0DP71 79 aa2.75□□□□□ -1.97
VPS41-211ENST00000466017 RPS28P62857 69 aaKnown RBP2.75□□□□□ -1.97
VPS41-211ENST00000466017 C4orf26Q17RF5 130 aa2.75□□□□□ -1.97
VPS41-211ENST00000466017 KRTAP19-2Q3LHN2 52 aa2.75□□□□□ -1.97
VPS41-211ENST00000466017 H1FX-AS1Q4G0G2 97 aa2.74□□□□□ -1.97
VPS41-211ENST00000466017 SERP1Q9Y6X1 66 aa2.72□□□□□ -1.97
VPS41-211ENST00000466017 COA5Q86WW8 74 aa2.7□□□□□ -1.98
VPS41-211ENST00000466017 KRTAP12-2P59991 146 aa2.68□□□□□ -1.98
VPS41-211ENST00000466017 SPTSSBQ8NFR3 76 aa2.68□□□□□ -1.98
VPS41-211ENST00000466017 CHKB-CPT1BH3BT56 60 aa2.67□□□□□ -1.98
VPS41-211ENST00000466017 RNF213Q63HN8 5207 aa2.67□□□□□ -1.98
VPS41-211ENST00000466017 SMIM26A0A096LP01 95 aa2.66□□□□□ -1.98
VPS41-211ENST00000466017 S4R3F8 94 aa2.66□□□□□ -1.98
VPS41-211ENST00000466017 FLGP20930 4061 aaPredicted RBP2.65□□□□□ -1.99
VPS41-211ENST00000466017 CSAG1Q6PB30 78 aa2.65□□□□□ -1.99
VPS41-211ENST00000466017 LCA10Q71F78 164 aa2.65□□□□□ -1.99
VPS41-211ENST00000466017 UBR4Q5T4S7 5183 aa2.64□□□□□ -1.99
VPS41-211ENST00000466017 H0YAA0 97 aa2.63□□□□□ -1.99
VPS41-211ENST00000466017 LINC01558Q9Y6Z2 57 aa2.63□□□□□ -1.99
VPS41-211ENST00000466017 V9GYY9 64 aa2.63□□□□□ -1.99
VPS41-211ENST00000466017 OBSCNQ5VST9 7968 aa2.63□□□□□ -1.99
VPS41-211ENST00000466017 MUC2Q02817 5179 aa2.62□□□□□ -1.99
VPS41-211ENST00000466017 MT1HP80294 61 aa2.62□□□□□ -1.99
VPS41-211ENST00000466017 Q1T7F1 81 aa2.62□□□□□ -1.99
VPS41-211ENST00000466017 FAT4Q6V0I7 4981 aa2.62□□□□□ -1.99
VPS41-211ENST00000466017 A8MU10 97 aa2.57□□□□□ -2
VPS41-211ENST00000466017 SEC61GP60059 68 aa2.57□□□□□ -2
VPS41-211ENST00000466017 LCE3AQ5TA76 89 aa2.57□□□□□ -2
VPS41-211ENST00000466017 PRR15LQ9BU68 103 aa2.57□□□□□ -2
VPS41-211ENST00000466017 A0A1B0GU69 56 aa2.56□□□□□ -2
VPS41-211ENST00000466017 M0R2T5 61 aa2.54□□□□□ -2
VPS41-211ENST00000466017 CRIPTQ9P021 101 aa2.54□□□□□ -2
VPS41-211ENST00000466017 ADM2Q7Z4H4 148 aa2.53□□□□□ -2
VPS41-211ENST00000466017 M0QZ58 72 aa2.52□□□□□ -2.01
VPS41-211ENST00000466017 Q5VV11 94 aa2.52□□□□□ -2.01
VPS41-211ENST00000466017 A0A1B0GU33 70 aa2.51□□□□□ -2.01
VPS41-211ENST00000466017 P0C880 135 aa2.51□□□□□ -2.01
VPS41-211ENST00000466017 UQCR11O14957 56 aa2.5□□□□□ -2.01
VPS41-211ENST00000466017 KRTAP4-3Q9BYR4 195 aa2.5□□□□□ -2.01
VPS41-211ENST00000466017 PSPHP1O15172 72 aa2.49□□□□□ -2.01
VPS41-211ENST00000466017 MT2AP02795 61 aa2.49□□□□□ -2.01
VPS41-211ENST00000466017 MT1FP04733 61 aa2.47□□□□□ -2.01
VPS41-211ENST00000466017 SPATA8Q6RVD6 105 aa2.47□□□□□ -2.01
VPS41-211ENST00000466017 SPRR2GQ9BYE4 73 aa2.47□□□□□ -2.01
VPS41-211ENST00000466017 KRTAP10-10P60014 251 aa2.46□□□□□ -2.02
VPS41-211ENST00000466017 R4GN34 69 aa2.45□□□□□ -2.02
VPS41-211ENST00000466017 A6NED7 52 aa2.44□□□□□ -2.02
VPS41-211ENST00000466017 A6NN06 94 aa2.44□□□□□ -2.02
VPS41-211ENST00000466017 MIR22HGQ0VDD5 57 aa2.44□□□□□ -2.02
VPS41-211ENST00000466017 KRTAP13-4Q3LI77 160 aa2.44□□□□□ -2.02
VPS41-211ENST00000466017 KRTAP19-8Q3LI54 63 aa2.43□□□□□ -2.02
VPS41-211ENST00000466017 CDC42SE1Q9NRR8 79 aa2.43□□□□□ -2.02
VPS41-211ENST00000466017 KRTAP5-5Q701N2 237 aaPredicted RBP2.42□□□□□ -2.02
VPS41-211ENST00000466017 KRTAP5-2Q701N4 177 aa2.39□□□□□ -2.03
VPS41-211ENST00000466017 KRTAP12-1P59990 96 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms