RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 V9GYY9 64 aa8.51□□□□□ -1.05
PTPRU-206ENST00000465525 DMAC1Q96GE9 116 aa8.5□□□□□ -1.05
PTPRU-206ENST00000465525 ACYP2P14621 99 aa8.49□□□□□ -1.05
PTPRU-206ENST00000465525 MT1HP80294 61 aa8.49□□□□□ -1.05
PTPRU-206ENST00000465525 LCE2AQ5TA79 106 aaPredicted RBP8.48□□□□□ -1.05
PTPRU-206ENST00000465525 FLGP20930 4061 aaPredicted RBP8.48□□□□□ -1.05
PTPRU-206ENST00000465525 A8MUN3 132 aa8.46□□□□□ -1.05
PTPRU-206ENST00000465525 S4R3F8 94 aa8.42□□□□□ -1.06
PTPRU-206ENST00000465525 M0R2T5 61 aa8.4□□□□□ -1.07
PTPRU-206ENST00000465525 LCA10Q71F78 164 aa8.4□□□□□ -1.07
PTPRU-206ENST00000465525 CHKB-CPT1BH3BT56 60 aa8.37□□□□□ -1.07
PTPRU-206ENST00000465525 KRTAP3-3Q9BYR6 98 aa8.34□□□□□ -1.08
PTPRU-206ENST00000465525 PSPHP1O15172 72 aa8.3□□□□□ -1.08
PTPRU-206ENST00000465525 LINC01558Q9Y6Z2 57 aa8.3□□□□□ -1.08
PTPRU-206ENST00000465525 PRR15LQ9BU68 103 aa8.27□□□□□ -1.09
PTPRU-206ENST00000465525 KRTAP10-6P60371 365 aaPredicted RBP8.24□□□□□ -1.09
PTPRU-206ENST00000465525 CSAG1Q6PB30 78 aa8.24□□□□□ -1.09
PTPRU-206ENST00000465525 Q5VV11 94 aa8.23□□□□□ -1.09
PTPRU-206ENST00000465525 LORP23490 312 aaPredicted RBP8.21□□□□□ -1.09
PTPRU-206ENST00000465525 SPTSSBQ8NFR3 76 aa8.18□□□□□ -1.1
PTPRU-206ENST00000465525 BRK1Q8WUW1 75 aa8.18□□□□□ -1.1
PTPRU-206ENST00000465525 PRO0628Q9UI54 55 aa8.17□□□□□ -1.1
PTPRU-206ENST00000465525 KRTAP9-8Q9BYQ0 159 aa8.11□□□□□ -1.11
PTPRU-206ENST00000465525 SVIPQ8NHG7 77 aa8.11□□□□□ -1.11
PTPRU-206ENST00000465525 A0A1B0GU69 56 aa8.1□□□□□ -1.11
PTPRU-206ENST00000465525 A6NED7 52 aa8.09□□□□□ -1.11
PTPRU-206ENST00000465525 MT2AP02795 61 aa8.05□□□□□ -1.12
PTPRU-206ENST00000465525 ADM2Q7Z4H4 148 aa8.03□□□□□ -1.12
PTPRU-206ENST00000465525 SEC61GP60059 68 aa8.02□□□□□ -1.13
PTPRU-206ENST00000465525 MT1FP04733 61 aa8.01□□□□□ -1.13
PTPRU-206ENST00000465525 KRTAP10-10P60014 251 aa7.98□□□□□ -1.13
PTPRU-206ENST00000465525 CDC42SE1Q9NRR8 79 aa7.98□□□□□ -1.13
PTPRU-206ENST00000465525 H0YAA0 97 aa7.98□□□□□ -1.13
PTPRU-206ENST00000465525 KRTAP3-2Q9BYR7 98 aa7.96□□□□□ -1.13
PTPRU-206ENST00000465525 P0C880 135 aa7.95□□□□□ -1.14
PTPRU-206ENST00000465525 UQCR11O14957 56 aa7.92□□□□□ -1.14
PTPRU-206ENST00000465525 LCE2DQ5TA82 110 aaPredicted RBP7.89□□□□□ -1.15
PTPRU-206ENST00000465525 A8MU10 97 aa7.86□□□□□ -1.15
PTPRU-206ENST00000465525 SPATA8Q6RVD6 105 aa7.85□□□□□ -1.15
PTPRU-206ENST00000465525 KRTAP9-3Q9BYQ3 159 aa7.84□□□□□ -1.15
PTPRU-206ENST00000465525 MIR22HGQ0VDD5 57 aa7.83□□□□□ -1.16
PTPRU-206ENST00000465525 KRTAP9-2Q9BYQ4 174 aa7.79□□□□□ -1.16
PTPRU-206ENST00000465525 A0A1B0GU33 70 aa7.76□□□□□ -1.17
PTPRU-206ENST00000465525 PMAIP1Q13794 54 aa7.76□□□□□ -1.17
PTPRU-206ENST00000465525 CRIPTQ9P021 101 aa7.76□□□□□ -1.17
PTPRU-206ENST00000465525 M0QZ58 72 aa7.73□□□□□ -1.17
PTPRU-206ENST00000465525 KRTAP19-1Q8IUB9 90 aa7.73□□□□□ -1.17
PTPRU-206ENST00000465525 R4GN34 69 aa7.73□□□□□ -1.17
PTPRU-206ENST00000465525 KRTAP13-4Q3LI77 160 aa7.7□□□□□ -1.18
PTPRU-206ENST00000465525 LCE2BO14633 110 aa7.69□□□□□ -1.18
PTPRU-206ENST00000465525 SPRR2GQ9BYE4 73 aa7.69□□□□□ -1.18
PTPRU-206ENST00000465525 A6NN06 94 aa7.65□□□□□ -1.18
PTPRU-206ENST00000465525 LINC01554Q52M75 96 aa7.64□□□□□ -1.19
PTPRU-206ENST00000465525 USH2AO75445 5202 aa7.6□□□□□ -1.19
PTPRU-206ENST00000465525 A0A0D9SG42 100 aa7.55□□□□□ -1.2
PTPRU-206ENST00000465525 FSIP2Q5CZC0 6907 aa7.55□□□□□ -1.2
PTPRU-206ENST00000465525 KRTAP19-8Q3LI54 63 aa7.54□□□□□ -1.2
PTPRU-206ENST00000465525 KTN1-AS1Q86SY8 53 aa7.52□□□□□ -1.21
PTPRU-206ENST00000465525 MT1BP07438 61 aa7.51□□□□□ -1.21
PTPRU-206ENST00000465525 K7ERS5 55 aa7.5□□□□□ -1.21
PTPRU-206ENST00000465525 CRCT1Q9UGL9 99 aa7.46□□□□□ -1.22
PTPRU-206ENST00000465525 SSPOA2VEC9 5147 aa7.43□□□□□ -1.22
PTPRU-206ENST00000465525 PLAC4Q8WY50 150 aa7.38□□□□□ -1.23
PTPRU-206ENST00000465525 SPINT4Q6UDR6 99 aa7.37□□□□□ -1.23
PTPRU-206ENST00000465525 KRTAP9-6A0A140TA67 174 aa7.36□□□□□ -1.23
PTPRU-206ENST00000465525 KRTAP12-1P59990 96 aa7.36□□□□□ -1.23
PTPRU-206ENST00000465525 KRTAP12-2P59991 146 aa7.35□□□□□ -1.23
PTPRU-206ENST00000465525 KRTAP19-6Q3LI70 58 aa7.34□□□□□ -1.23
PTPRU-206ENST00000465525 CAMK2N1Q7Z7J9 78 aa7.22□□□□□ -1.25
PTPRU-206ENST00000465525 KRTAP10-5P60370 271 aa7.19□□□□□ -1.26
PTPRU-206ENST00000465525 MT1XP80297 61 aa7.19□□□□□ -1.26
PTPRU-206ENST00000465525 FCGBPQ9Y6R7 5405 aaPredicted RBP7.19□□□□□ -1.26
PTPRU-206ENST00000465525 ROMO1P60602 79 aa7.18□□□□□ -1.26
PTPRU-206ENST00000465525 PRAC1Q96KF2 57 aa7.18□□□□□ -1.26
PTPRU-206ENST00000465525 PRO2289Q9P1D8 64 aa7.15□□□□□ -1.27
PTPRU-206ENST00000465525 KRTAP25-1Q3LHN0 102 aa7□□□□□ -1.29
PTPRU-206ENST00000465525 C10orf95Q9H7T3 257 aa7□□□□□ -1.29
PTPRU-206ENST00000465525 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.91□□□□□ -1.3
PTPRU-206ENST00000465525 KRTAP10-7P60409 375 aaPredicted RBP6.91□□□□□ -1.3
PTPRU-206ENST00000465525 MACF1Q9UPN3 7388 aaKnown RBP6.86□□□□□ -1.31
PTPRU-206ENST00000465525 TNP1P09430 55 aa6.79□□□□□ -1.32
PTPRU-206ENST00000465525 KRTAP10-12P60413 245 aa6.79□□□□□ -1.32
PTPRU-206ENST00000465525 KRTAP4-8A0A0G2JLE6 195 aa6.73□□□□□ -1.33
PTPRU-206ENST00000465525 KRTAP4-8Q9BYQ9 185 aa6.73□□□□□ -1.33
PTPRU-206ENST00000465525 SYNE2Q8WXH0 6885 aaKnown RBP6.7□□□□□ -1.34
PTPRU-206ENST00000465525 KRTAP9-7A8MTY7 169 aa6.68□□□□□ -1.34
PTPRU-206ENST00000465525 KMT2DO14686 5537 aa6.67□□□□□ -1.34
PTPRU-206ENST00000465525 KRTAP6-3Q3LI67 103 aa6.65□□□□□ -1.35
PTPRU-206ENST00000465525 LCE3AQ5TA76 89 aa6.61□□□□□ -1.35
PTPRU-206ENST00000465525 KRTAP8-1Q8IUC2 63 aa6.61□□□□□ -1.35
PTPRU-206ENST00000465525 PP632Q6XCG6 107 aa6.59□□□□□ -1.35
PTPRU-206ENST00000465525 KRTAP5-9P26371 169 aa6.55□□□□□ -1.36
PTPRU-206ENST00000465525 KRTAP23-1A1A580 65 aa6.51□□□□□ -1.37
PTPRU-206ENST00000465525 SPRR2FQ96RM1 72 aa6.47□□□□□ -1.37
PTPRU-206ENST00000465525 KRTAP19-5Q3LI72 72 aa6.45□□□□□ -1.38
PTPRU-206ENST00000465525 KRTAP19-7Q3SYF9 63 aa6.41□□□□□ -1.38
PTPRU-206ENST00000465525 MUC12Q9UKN1 5478 aa6.38□□□□□ -1.39
PTPRU-206ENST00000465525 KRTAP12-3P60328 96 aa6.33□□□□□ -1.4
PTPRU-206ENST00000465525 MT1EP04732 61 aa6.32□□□□□ -1.4
PTPRU-206ENST00000465525 MDN1Q9NU22 5596 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms