RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 SMIM26A0A096LP01 95 aa7.36□□□□□ -1.23
HDAC6-215ENST00000465457 HRES1P13985 223 aa7.34□□□□□ -1.23
HDAC6-215ENST00000465457 USH2AO75445 5202 aa7.33□□□□□ -1.24
HDAC6-215ENST00000465457 FLGP20930 4061 aaPredicted RBP7.32□□□□□ -1.24
HDAC6-215ENST00000465457 RPL37P61927 97 aaKnown RBP7.32□□□□□ -1.24
HDAC6-215ENST00000465457 ATP11AUNQ6ZP68 121 aa7.32□□□□□ -1.24
HDAC6-215ENST00000465457 XP32Q5T750 250 aa7.3□□□□□ -1.24
HDAC6-215ENST00000465457 DMAC1Q96GE9 116 aa7.3□□□□□ -1.24
HDAC6-215ENST00000465457 ACYP2P14621 99 aa7.29□□□□□ -1.24
HDAC6-215ENST00000465457 COA5Q86WW8 74 aa7.27□□□□□ -1.25
HDAC6-215ENST00000465457 A8MUN3 132 aa7.26□□□□□ -1.25
HDAC6-215ENST00000465457 LCE2BO14633 110 aa7.23□□□□□ -1.25
HDAC6-215ENST00000465457 SPINK7P58062 85 aa7.23□□□□□ -1.25
HDAC6-215ENST00000465457 M0R2T5 61 aa7.22□□□□□ -1.25
HDAC6-215ENST00000465457 V9GYY9 64 aa7.22□□□□□ -1.25
HDAC6-215ENST00000465457 FCGBPQ9Y6R7 5405 aaPredicted RBP7.21□□□□□ -1.26
HDAC6-215ENST00000465457 CHKB-CPT1BH3BT56 60 aa7.18□□□□□ -1.26
HDAC6-215ENST00000465457 Q1T7F1 81 aa7.18□□□□□ -1.26
HDAC6-215ENST00000465457 SYNE2Q8WXH0 6885 aaKnown RBP7.17□□□□□ -1.26
HDAC6-215ENST00000465457 MACF1Q9UPN3 7388 aaKnown RBP7.15□□□□□ -1.27
HDAC6-215ENST00000465457 C4orf26Q17RF5 130 aa7.13□□□□□ -1.27
HDAC6-215ENST00000465457 MPLKIPQ8TAP9 179 aa7.12□□□□□ -1.27
HDAC6-215ENST00000465457 COX6B2Q6YFQ2 88 aa7.11□□□□□ -1.27
HDAC6-215ENST00000465457 SPTSSBQ8NFR3 76 aa7.09□□□□□ -1.27
HDAC6-215ENST00000465457 LINC01558Q9Y6Z2 57 aa7.05□□□□□ -1.28
HDAC6-215ENST00000465457 KRTAP19-1Q8IUB9 90 aa7.02□□□□□ -1.29
HDAC6-215ENST00000465457 KRTAP3-1Q9BYR8 98 aa7□□□□□ -1.29
HDAC6-215ENST00000465457 PRR15LQ9BU68 103 aa6.99□□□□□ -1.29
HDAC6-215ENST00000465457 KRTAP9-8Q9BYQ0 159 aa6.99□□□□□ -1.29
HDAC6-215ENST00000465457 RBM12B-AS1Q9P1G2 102 aa6.98□□□□□ -1.29
HDAC6-215ENST00000465457 PSPHP1O15172 72 aa6.96□□□□□ -1.3
HDAC6-215ENST00000465457 Q5VV11 94 aa6.92□□□□□ -1.3
HDAC6-215ENST00000465457 A0A1B0GU69 56 aa6.91□□□□□ -1.3
HDAC6-215ENST00000465457 SEC61GP60059 68 aa6.9□□□□□ -1.3
HDAC6-215ENST00000465457 H1FX-AS1Q4G0G2 97 aa6.9□□□□□ -1.3
HDAC6-215ENST00000465457 S4R3F8 94 aa6.88□□□□□ -1.31
HDAC6-215ENST00000465457 MT2AP02795 61 aa6.85□□□□□ -1.31
HDAC6-215ENST00000465457 MT1FP04733 61 aa6.82□□□□□ -1.32
HDAC6-215ENST00000465457 A6NED7 52 aa6.81□□□□□ -1.32
HDAC6-215ENST00000465457 LCA10Q71F78 164 aa6.81□□□□□ -1.32
HDAC6-215ENST00000465457 BRK1Q8WUW1 75 aa6.8□□□□□ -1.32
HDAC6-215ENST00000465457 KRTAP9-3Q9BYQ3 159 aa6.78□□□□□ -1.32
HDAC6-215ENST00000465457 PRO0628Q9UI54 55 aa6.77□□□□□ -1.33
HDAC6-215ENST00000465457 NEBP20929 6669 aa6.76□□□□□ -1.33
HDAC6-215ENST00000465457 UQCR11O14957 56 aa6.75□□□□□ -1.33
HDAC6-215ENST00000465457 KRTAP6-3Q3LI67 103 aa6.73□□□□□ -1.33
HDAC6-215ENST00000465457 CSAG1Q6PB30 78 aa6.73□□□□□ -1.33
HDAC6-215ENST00000465457 CDC42SE1Q9NRR8 79 aa6.73□□□□□ -1.33
HDAC6-215ENST00000465457 H3BS24 57 aa6.71□□□□□ -1.34
HDAC6-215ENST00000465457 KRTAP19-6Q3LI70 58 aa6.71□□□□□ -1.34
HDAC6-215ENST00000465457 KRTAP10-10P60014 251 aa6.67□□□□□ -1.34
HDAC6-215ENST00000465457 A0A1B0GU33 70 aa6.66□□□□□ -1.34
HDAC6-215ENST00000465457 MIR22HGQ0VDD5 57 aa6.65□□□□□ -1.34
HDAC6-215ENST00000465457 SPATA8Q6RVD6 105 aa6.65□□□□□ -1.34
HDAC6-215ENST00000465457 H0YAA0 97 aa6.64□□□□□ -1.35
HDAC6-215ENST00000465457 MUC12Q9UKN1 5478 aa6.62□□□□□ -1.35
HDAC6-215ENST00000465457 ADM2Q7Z4H4 148 aa6.55□□□□□ -1.36
HDAC6-215ENST00000465457 KRTAP20-1Q3LI63 56 aa6.54□□□□□ -1.36
HDAC6-215ENST00000465457 A8MU10 97 aa6.52□□□□□ -1.37
HDAC6-215ENST00000465457 P0C880 135 aa6.48□□□□□ -1.37
HDAC6-215ENST00000465457 M0QZ58 72 aa6.46□□□□□ -1.38
HDAC6-215ENST00000465457 SVIPQ8NHG7 77 aa6.46□□□□□ -1.38
HDAC6-215ENST00000465457 PMAIP1Q13794 54 aa6.45□□□□□ -1.38
HDAC6-215ENST00000465457 K7ERS5 55 aa6.43□□□□□ -1.38
HDAC6-215ENST00000465457 A6NN06 94 aa6.38□□□□□ -1.39
HDAC6-215ENST00000465457 KRTAP13-4Q3LI77 160 aa6.37□□□□□ -1.39
HDAC6-215ENST00000465457 R4GN34 69 aa6.35□□□□□ -1.39
HDAC6-215ENST00000465457 CRIPTQ9P021 101 aa6.34□□□□□ -1.39
HDAC6-215ENST00000465457 MDN1Q9NU22 5596 aa6.3□□□□□ -1.4
HDAC6-215ENST00000465457 KMT2DO14686 5537 aa6.29□□□□□ -1.4
HDAC6-215ENST00000465457 A0A0D9SG42 100 aa6.29□□□□□ -1.4
HDAC6-215ENST00000465457 KTN1-AS1Q86SY8 53 aa6.25□□□□□ -1.41
HDAC6-215ENST00000465457 KRTAP5-9P26371 169 aa6.22□□□□□ -1.41
HDAC6-215ENST00000465457 KRTAP12-1P59990 96 aa6.19□□□□□ -1.42
HDAC6-215ENST00000465457 KRTAP2-3P0C7H8 128 aa6.17□□□□□ -1.42
HDAC6-215ENST00000465457 LINC01554Q52M75 96 aa6.17□□□□□ -1.42
HDAC6-215ENST00000465457 SPINT4Q6UDR6 99 aa6.17□□□□□ -1.42
HDAC6-215ENST00000465457 KRTAP2-4Q9BYR9 128 aa6.17□□□□□ -1.42
HDAC6-215ENST00000465457 KRTAP12-2P59991 146 aa6.15□□□□□ -1.42
HDAC6-215ENST00000465457 ROMO1P60602 79 aa6.1□□□□□ -1.43
HDAC6-215ENST00000465457 MT1BP07438 61 aa6.09□□□□□ -1.43
HDAC6-215ENST00000465457 SPRR2GQ9BYE4 73 aa6.08□□□□□ -1.44
HDAC6-215ENST00000465457 KRTAP10-5P60370 271 aa6.01□□□□□ -1.45
HDAC6-215ENST00000465457 CAMK2N1Q7Z7J9 78 aa5.97□□□□□ -1.45
HDAC6-215ENST00000465457 SPRR2EP22531 72 aa5.96□□□□□ -1.46
HDAC6-215ENST00000465457 SPRR2BP35325 72 aa5.96□□□□□ -1.46
HDAC6-215ENST00000465457 SPRR2AP35326 72 aa5.96□□□□□ -1.46
HDAC6-215ENST00000465457 PLAC4Q8WY50 150 aa5.94□□□□□ -1.46
HDAC6-215ENST00000465457 PRAC1Q96KF2 57 aa5.93□□□□□ -1.46
HDAC6-215ENST00000465457 KRTAP2-2Q9BYT5 123 aa5.93□□□□□ -1.46
HDAC6-215ENST00000465457 KRTAP2-1Q9BYU5 128 aa5.93□□□□□ -1.46
HDAC6-215ENST00000465457 GPR98Q8WXG9 6306 aa5.92□□□□□ -1.46
HDAC6-215ENST00000465457 KRTAP19-8Q3LI54 63 aa5.91□□□□□ -1.46
HDAC6-215ENST00000465457 SPRR2FQ96RM1 72 aa5.91□□□□□ -1.46
HDAC6-215ENST00000465457 KRTAP25-1Q3LHN0 102 aa5.87□□□□□ -1.47
HDAC6-215ENST00000465457 C10orf95Q9H7T3 257 aa5.83□□□□□ -1.48
HDAC6-215ENST00000465457 LCE1AQ5T7P2 110 aa5.82□□□□□ -1.48
HDAC6-215ENST00000465457 SPRR2DP22532 72 aa5.76□□□□□ -1.49
HDAC6-215ENST00000465457 TNP1P09430 55 aa5.72□□□□□ -1.49
HDAC6-215ENST00000465457 PP632Q6XCG6 107 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms