RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 LCA10Q71F78 164 aa8.06□□□□□ -1.12
USP39-211ENST00000465282 KRTAP10-10P60014 251 aa8.04□□□□□ -1.12
USP39-211ENST00000465282 MT1FP04733 61 aa8.03□□□□□ -1.12
USP39-211ENST00000465282 SERP2Q8N6R1 65 aa8.02□□□□□ -1.13
USP39-211ENST00000465282 NDUFC1O43677 76 aa7.95□□□□□ -1.14
USP39-211ENST00000465282 DMAC1Q96GE9 116 aa7.95□□□□□ -1.14
USP39-211ENST00000465282 KRTAP9-3Q9BYQ3 159 aa7.93□□□□□ -1.14
USP39-211ENST00000465282 C20orf197Q8N268 126 aa7.9□□□□□ -1.14
USP39-211ENST00000465282 SNURFQ9Y675 71 aa7.9□□□□□ -1.14
USP39-211ENST00000465282 ACYP2P14621 99 aa7.85□□□□□ -1.15
USP39-211ENST00000465282 COX7CP15954 63 aa7.85□□□□□ -1.15
USP39-211ENST00000465282 SPANXA2-OT1Q8N9U9 137 aa7.84□□□□□ -1.15
USP39-211ENST00000465282 H0YAA0 97 aa7.82□□□□□ -1.16
USP39-211ENST00000465282 KRTAP9-7A8MTY7 169 aa7.8□□□□□ -1.16
USP39-211ENST00000465282 LCE2BO14633 110 aa7.79□□□□□ -1.16
USP39-211ENST00000465282 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.76□□□□□ -1.17
USP39-211ENST00000465282 ANAPC13Q9BS18 74 aa7.74□□□□□ -1.17
USP39-211ENST00000465282 CRIPTQ9P021 101 aa7.73□□□□□ -1.17
USP39-211ENST00000465282 SPTSSBQ8NFR3 76 aa7.72□□□□□ -1.17
USP39-211ENST00000465282 CHKB-CPT1BH3BT56 60 aa7.68□□□□□ -1.18
USP39-211ENST00000465282 USH2AO75445 5202 aa7.67□□□□□ -1.18
USP39-211ENST00000465282 ADM2Q7Z4H4 148 aa7.67□□□□□ -1.18
USP39-211ENST00000465282 KRTAP19-1Q8IUB9 90 aa7.67□□□□□ -1.18
USP39-211ENST00000465282 SPRR2GQ9BYE4 73 aa7.67□□□□□ -1.18
USP39-211ENST00000465282 H7BZZ5 65 aa7.65□□□□□ -1.18
USP39-211ENST00000465282 SSPOA2VEC9 5147 aa7.62□□□□□ -1.19
USP39-211ENST00000465282 CYSTM1Q9H1C7 97 aa7.59□□□□□ -1.19
USP39-211ENST00000465282 KRTAP19-8Q3LI54 63 aa7.57□□□□□ -1.2
USP39-211ENST00000465282 COA5Q86WW8 74 aa7.54□□□□□ -1.2
USP39-211ENST00000465282 CCDC179H3BU77 68 aa7.53□□□□□ -1.2
USP39-211ENST00000465282 Q5VV11 94 aa7.53□□□□□ -1.2
USP39-211ENST00000465282 P0C880 135 aa7.52□□□□□ -1.21
USP39-211ENST00000465282 KRTAP19-6Q3LI70 58 aa7.52□□□□□ -1.21
USP39-211ENST00000465282 R4GN34 69 aa7.48□□□□□ -1.21
USP39-211ENST00000465282 FCGBPQ9Y6R7 5405 aaPredicted RBP7.48□□□□□ -1.21
USP39-211ENST00000465282 MT1BP07438 61 aa7.47□□□□□ -1.21
USP39-211ENST00000465282 SYNE2Q8WXH0 6885 aaKnown RBP7.46□□□□□ -1.22
USP39-211ENST00000465282 MACF1Q9UPN3 7388 aaKnown RBP7.45□□□□□ -1.22
USP39-211ENST00000465282 ATP5EP56381 51 aaPredicted RBP7.44□□□□□ -1.22
USP39-211ENST00000465282 M0QZ58 72 aa7.41□□□□□ -1.22
USP39-211ENST00000465282 SEC61GP60059 68 aa7.35□□□□□ -1.23
USP39-211ENST00000465282 TMEM258P61165 79 aa7.34□□□□□ -1.23
USP39-211ENST00000465282 SERP1Q9Y6X1 66 aa7.32□□□□□ -1.24
USP39-211ENST00000465282 PLAC4Q8WY50 150 aa7.3□□□□□ -1.24
USP39-211ENST00000465282 A6NN06 94 aa7.29□□□□□ -1.24
USP39-211ENST00000465282 KRTAP10-5P60370 271 aa7.26□□□□□ -1.25
USP39-211ENST00000465282 LINC01554Q52M75 96 aa7.25□□□□□ -1.25
USP39-211ENST00000465282 PRO2289Q9P1D8 64 aa7.19□□□□□ -1.26
USP39-211ENST00000465282 A0A1B0GU69 56 aa7.18□□□□□ -1.26
USP39-211ENST00000465282 A0A1B0GU33 70 aa7.15□□□□□ -1.26
USP39-211ENST00000465282 KRTAP13-4Q3LI77 160 aa7.14□□□□□ -1.27
USP39-211ENST00000465282 PRR15LQ9BU68 103 aa7.1□□□□□ -1.27
USP39-211ENST00000465282 MT1XP80297 61 aa7.09□□□□□ -1.27
USP39-211ENST00000465282 LINC01558Q9Y6Z2 57 aa7.07□□□□□ -1.28
USP39-211ENST00000465282 KRTAP6-3Q3LI67 103 aa7.06□□□□□ -1.28
USP39-211ENST00000465282 NEBP20929 6669 aa7.04□□□□□ -1.28
USP39-211ENST00000465282 SPATA8Q6RVD6 105 aa7.03□□□□□ -1.28
USP39-211ENST00000465282 PCP4P48539 62 aa7.02□□□□□ -1.29
USP39-211ENST00000465282 SMIM26A0A096LP01 95 aa6.98□□□□□ -1.29
USP39-211ENST00000465282 A0A0D9SG42 100 aa6.96□□□□□ -1.3
USP39-211ENST00000465282 CAMK2N1Q7Z7J9 78 aa6.93□□□□□ -1.3
USP39-211ENST00000465282 V9GYY9 64 aa6.93□□□□□ -1.3
USP39-211ENST00000465282 KRTAP12-2P59991 146 aa6.92□□□□□ -1.3
USP39-211ENST00000465282 MUC12Q9UKN1 5478 aa6.88□□□□□ -1.31
USP39-211ENST00000465282 KRTAP12-1P59990 96 aa6.87□□□□□ -1.31
USP39-211ENST00000465282 SPINT4Q6UDR6 99 aa6.87□□□□□ -1.31
USP39-211ENST00000465282 UQCR11O14957 56 aa6.86□□□□□ -1.31
USP39-211ENST00000465282 Q1T7F1 81 aa6.86□□□□□ -1.31
USP39-211ENST00000465282 RPS28P62857 69 aaKnown RBP6.84□□□□□ -1.31
USP39-211ENST00000465282 A8MU10 97 aa6.82□□□□□ -1.32
USP39-211ENST00000465282 KRTAP20-1Q3LI63 56 aa6.82□□□□□ -1.32
USP39-211ENST00000465282 KRTAP10-12P60413 245 aa6.77□□□□□ -1.33
USP39-211ENST00000465282 KRTAP5-9P26371 169 aa6.75□□□□□ -1.33
USP39-211ENST00000465282 KRTAP10-7P60409 375 aaPredicted RBP6.75□□□□□ -1.33
USP39-211ENST00000465282 PSPHP1O15172 72 aa6.73□□□□□ -1.33
USP39-211ENST00000465282 MIR22HGQ0VDD5 57 aa6.71□□□□□ -1.34
USP39-211ENST00000465282 KRTAP8-1Q8IUC2 63 aa6.69□□□□□ -1.34
USP39-211ENST00000465282 KMT2DO14686 5537 aa6.66□□□□□ -1.34
USP39-211ENST00000465282 KRTAP4-8A0A0G2JLE6 195 aa6.64□□□□□ -1.35
USP39-211ENST00000465282 KRTAP4-8Q9BYQ9 185 aa6.64□□□□□ -1.35
USP39-211ENST00000465282 SVIPQ8NHG7 77 aa6.63□□□□□ -1.35
USP39-211ENST00000465282 SPRR2FQ96RM1 72 aa6.59□□□□□ -1.35
USP39-211ENST00000465282 MDN1Q9NU22 5596 aa6.57□□□□□ -1.36
USP39-211ENST00000465282 K7ERS5 55 aa6.57□□□□□ -1.36
USP39-211ENST00000465282 A6NED7 52 aa6.56□□□□□ -1.36
USP39-211ENST00000465282 C10orf95Q9H7T3 257 aa6.52□□□□□ -1.37
USP39-211ENST00000465282 TNP1P09430 55 aa6.5□□□□□ -1.37
USP39-211ENST00000465282 KRTAP2-3P0C7H8 128 aa6.46□□□□□ -1.38
USP39-211ENST00000465282 KRTAP2-4Q9BYR9 128 aa6.46□□□□□ -1.38
USP39-211ENST00000465282 SPRR2EP22531 72 aa6.42□□□□□ -1.38
USP39-211ENST00000465282 SPRR2BP35325 72 aa6.42□□□□□ -1.38
USP39-211ENST00000465282 SPRR2AP35326 72 aa6.42□□□□□ -1.38
USP39-211ENST00000465282 LCE1AQ5T7P2 110 aa6.39□□□□□ -1.39
USP39-211ENST00000465282 CDC42SE1Q9NRR8 79 aa6.35□□□□□ -1.39
USP39-211ENST00000465282 KRTAP19-7Q3SYF9 63 aa6.33□□□□□ -1.4
USP39-211ENST00000465282 KRTAP25-1Q3LHN0 102 aa6.32□□□□□ -1.4
USP39-211ENST00000465282 LCE3AQ5TA76 89 aa6.28□□□□□ -1.4
USP39-211ENST00000465282 MT1EP04732 61 aa6.26□□□□□ -1.41
USP39-211ENST00000465282 KRTAP19-5Q3LI72 72 aa6.25□□□□□ -1.41
USP39-211ENST00000465282 KRTAP2-2Q9BYT5 123 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms