RNA–Protein interactions for RNA: ENST00000465224.5

CNNM3-203, Transcript of cyclin and CBS domain divalent metal cation transport mediator 3, humanhuman

TSL 1 (best)

Gene CNNM3, Length 2,607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNNM3-203ENST00000465224 APOBP04114 4563 aaKnown RBP5.43□□□□□ -1.54
CNNM3-203ENST00000465224 PKHD1L1Q86WI1 4243 aa5.43□□□□□ -1.54
CNNM3-203ENST00000465224 Q8N1X5 172 aa5.41□□□□□ -1.54
CNNM3-203ENST00000465224 HERC2O95714 4834 aa5.39□□□□□ -1.55
CNNM3-203ENST00000465224 TPRXLQ17RH7 258 aa5.39□□□□□ -1.55
CNNM3-203ENST00000465224 A0A1B0GU33 70 aa5.38□□□□□ -1.55
CNNM3-203ENST00000465224 C9orf92A6NGG3 77 aa5.38□□□□□ -1.55
CNNM3-203ENST00000465224 KRTAP10-4P60372 401 aaPredicted RBP5.36□□□□□ -1.55
CNNM3-203ENST00000465224 RPS29P62273 56 aaKnown RBP5.36□□□□□ -1.55
CNNM3-203ENST00000465224 SEC61BP60468 96 aaKnown RBP5.35□□□□□ -1.55
CNNM3-203ENST00000465224 C10orf95Q9H7T3 257 aa5.32□□□□□ -1.56
CNNM3-203ENST00000465224 H1FX-AS1Q4G0G2 97 aa5.32□□□□□ -1.56
CNNM3-203ENST00000465224 KRTAP3-1Q9BYR8 98 aa5.31□□□□□ -1.56
CNNM3-203ENST00000465224 LRP1Q07954 4544 aaKnown RBP5.29□□□□□ -1.56
CNNM3-203ENST00000465224 FAT3Q8TDW7 4589 aa5.27□□□□□ -1.57
CNNM3-203ENST00000465224 TNXBP22105 4242 aa5.25□□□□□ -1.57
CNNM3-203ENST00000465224 DMBT1Q9UGM3 2413 aaPredicted RBP5.23□□□□□ -1.57
CNNM3-203ENST00000465224 EPPK1P58107 5090 aaKnown RBP5.23□□□□□ -1.57
CNNM3-203ENST00000465224 HSPG2P98160 4391 aa5.22□□□□□ -1.57
CNNM3-203ENST00000465224 COX6B2Q6YFQ2 88 aa5.2□□□□□ -1.58
CNNM3-203ENST00000465224 MYCBP2O75592 4640 aa5.19□□□□□ -1.58
CNNM3-203ENST00000465224 RYR1P21817 5038 aa5.19□□□□□ -1.58
CNNM3-203ENST00000465224 Q5VSD8 79 aa5.19□□□□□ -1.58
CNNM3-203ENST00000465224 KIAA1109Q2LD37 5005 aa5.17□□□□□ -1.58
CNNM3-203ENST00000465224 RPL37P61927 97 aaKnown RBP5.16□□□□□ -1.58
CNNM3-203ENST00000465224 KRTAP10-8P60410 259 aa5.13□□□□□ -1.59
CNNM3-203ENST00000465224 A0A0D9SG42 100 aa5.1□□□□□ -1.59
CNNM3-203ENST00000465224 KRTAP13-4Q3LI77 160 aa5.09□□□□□ -1.6
CNNM3-203ENST00000465224 KRTAP9-6A0A140TA67 174 aa5.08□□□□□ -1.6
CNNM3-203ENST00000465224 KRTAP3-3Q9BYR6 98 aa5.07□□□□□ -1.6
CNNM3-203ENST00000465224 XP32Q5T750 250 aa5.06□□□□□ -1.6
CNNM3-203ENST00000465224 LPAP08519 4548 aa5.05□□□□□ -1.6
CNNM3-203ENST00000465224 KRTAP10-6P60371 365 aaPredicted RBP5.03□□□□□ -1.6
CNNM3-203ENST00000465224 J3QL48 77 aa5.02□□□□□ -1.61
CNNM3-203ENST00000465224 KRTAP4-5Q9BYR2 181 aa5.02□□□□□ -1.61
CNNM3-203ENST00000465224 KRTAP3-2Q9BYR7 98 aa5□□□□□ -1.61
CNNM3-203ENST00000465224 LRP2P98164 4655 aa4.98□□□□□ -1.61
CNNM3-203ENST00000465224 MT1HL1P0DM35 61 aa4.98□□□□□ -1.61
CNNM3-203ENST00000465224 S4R3F8 94 aa4.97□□□□□ -1.61
CNNM3-203ENST00000465224 KRTAP12-2P59991 146 aa4.95□□□□□ -1.62
CNNM3-203ENST00000465224 PLAC4Q8WY50 150 aa4.95□□□□□ -1.62
CNNM3-203ENST00000465224 ABCA13Q86UQ4 5058 aa4.93□□□□□ -1.62
CNNM3-203ENST00000465224 CAMK2N1Q7Z7J9 78 aa4.92□□□□□ -1.62
CNNM3-203ENST00000465224 UBR4Q5T4S7 5183 aa4.86□□□□□ -1.63
CNNM3-203ENST00000465224 KRTAP9-2Q9BYQ4 174 aa4.85□□□□□ -1.63
CNNM3-203ENST00000465224 KRTAP12-1P59990 96 aa4.85□□□□□ -1.63
CNNM3-203ENST00000465224 MUC17Q685J3 4493 aa4.76□□□□□ -1.65
CNNM3-203ENST00000465224 PRO2289Q9P1D8 64 aa4.73□□□□□ -1.65
CNNM3-203ENST00000465224 M0QZ58 72 aa4.7□□□□□ -1.66
CNNM3-203ENST00000465224 KRTAP4-1Q9BYQ7 146 aa4.68□□□□□ -1.66
CNNM3-203ENST00000465224 HERC1Q15751 4861 aa4.68□□□□□ -1.66
CNNM3-203ENST00000465224 LORP23490 312 aaPredicted RBP4.65□□□□□ -1.67
CNNM3-203ENST00000465224 MUC2Q02817 5179 aa4.62□□□□□ -1.67
CNNM3-203ENST00000465224 R4GN34 69 aa4.61□□□□□ -1.67
CNNM3-203ENST00000465224 KRTAP19-2Q3LHN2 52 aa4.58□□□□□ -1.68
CNNM3-203ENST00000465224 HMCN2Q8NDA2 5059 aa4.57□□□□□ -1.68
CNNM3-203ENST00000465224 FLGP20930 4061 aaPredicted RBP4.5□□□□□ -1.69
CNNM3-203ENST00000465224 CRCT1Q9UGL9 99 aa4.49□□□□□ -1.69
CNNM3-203ENST00000465224 LCE2DQ5TA82 110 aaPredicted RBP4.47□□□□□ -1.69
CNNM3-203ENST00000465224 PP632Q6XCG6 107 aa4.47□□□□□ -1.69
CNNM3-203ENST00000465224 INE1O15225 51 aa4.46□□□□□ -1.69
CNNM3-203ENST00000465224 FAT4Q6V0I7 4981 aa4.43□□□□□ -1.7
CNNM3-203ENST00000465224 SPRR5A0A1B0GTR4 108 aa4.42□□□□□ -1.7
CNNM3-203ENST00000465224 KRTAP9-7A8MTY7 169 aa4.42□□□□□ -1.7
CNNM3-203ENST00000465224 RNF213Q63HN8 5207 aa4.32□□□□□ -1.72
CNNM3-203ENST00000465224 LCE2CQ5TA81 110 aa4.3□□□□□ -1.72
CNNM3-203ENST00000465224 LCE2AQ5TA79 106 aaPredicted RBP4.23□□□□□ -1.73
CNNM3-203ENST00000465224 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.22□□□□□ -1.73
CNNM3-203ENST00000465224 TNP1P09430 55 aa4.2□□□□□ -1.74
CNNM3-203ENST00000465224 KRTAP19-1Q8IUB9 90 aa4.2□□□□□ -1.74
CNNM3-203ENST00000465224 MT1HP80294 61 aa4.19□□□□□ -1.74
CNNM3-203ENST00000465224 M0R2T5 61 aa4.19□□□□□ -1.74
CNNM3-203ENST00000465224 SPRR2GQ9BYE4 73 aa4.18□□□□□ -1.74
CNNM3-203ENST00000465224 KRTAP23-1A1A580 65 aa4.13□□□□□ -1.75
CNNM3-203ENST00000465224 MT1FP04733 61 aa4.12□□□□□ -1.75
CNNM3-203ENST00000465224 MT2AP02795 61 aa4.1□□□□□ -1.75
CNNM3-203ENST00000465224 KRTAP10-10P60014 251 aa4.08□□□□□ -1.76
CNNM3-203ENST00000465224 KRTAP9-8Q9BYQ0 159 aa4.08□□□□□ -1.76
CNNM3-203ENST00000465224 SSPOA2VEC9 5147 aa4.08□□□□□ -1.76
CNNM3-203ENST00000465224 LCE3AQ5TA76 89 aa4.04□□□□□ -1.76
CNNM3-203ENST00000465224 KRTAP19-8Q3LI54 63 aa3.99□□□□□ -1.77
CNNM3-203ENST00000465224 MT1BP07438 61 aa3.98□□□□□ -1.77
CNNM3-203ENST00000465224 KRTAP10-5P60370 271 aa3.96□□□□□ -1.78
CNNM3-203ENST00000465224 MT1XP80297 61 aa3.95□□□□□ -1.78
CNNM3-203ENST00000465224 KRTAP9-3Q9BYQ3 159 aa3.91□□□□□ -1.78
CNNM3-203ENST00000465224 KRTAP8-1Q8IUC2 63 aa3.9□□□□□ -1.79
CNNM3-203ENST00000465224 KRTAP20-1Q3LI63 56 aa3.89□□□□□ -1.79
CNNM3-203ENST00000465224 KRTAP10-7P60409 375 aaPredicted RBP3.86□□□□□ -1.79
CNNM3-203ENST00000465224 KRTAP10-12P60413 245 aa3.84□□□□□ -1.8
CNNM3-203ENST00000465224 KRTAP6-3Q3LI67 103 aa3.83□□□□□ -1.8
CNNM3-203ENST00000465224 USH2AO75445 5202 aa3.81□□□□□ -1.8
CNNM3-203ENST00000465224 KRTAP12-3P60328 96 aa3.81□□□□□ -1.8
CNNM3-203ENST00000465224 LCE2BO14633 110 aa3.78□□□□□ -1.8
CNNM3-203ENST00000465224 KMT2DO14686 5537 aa3.77□□□□□ -1.81
CNNM3-203ENST00000465224 NEBP20929 6669 aa3.73□□□□□ -1.81
CNNM3-203ENST00000465224 GPR98Q8WXG9 6306 aa3.72□□□□□ -1.81
CNNM3-203ENST00000465224 KRTAP19-5Q3LI72 72 aa3.69□□□□□ -1.82
CNNM3-203ENST00000465224 KRTAP4-8A0A0G2JLE6 195 aa3.65□□□□□ -1.83
CNNM3-203ENST00000465224 KRTAP4-8Q9BYQ9 185 aa3.65□□□□□ -1.83
CNNM3-203ENST00000465224 KRTAP2-3P0C7H8 128 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms