RNA–Protein interactions for RNA: ENST00000465068.5

NUP58-207, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-207ENST00000465068 S4R3F8 94 aa6.4□□□□□ -1.38
NUP58-207ENST00000465068 SSPOA2VEC9 5147 aa6.38□□□□□ -1.39
NUP58-207ENST00000465068 TRAV7A0A075B6U4 112 aa6.38□□□□□ -1.39
NUP58-207ENST00000465068 SMIM20Q8N5G0 67 aa6.35□□□□□ -1.39
NUP58-207ENST00000465068 CRCT1Q9UGL9 99 aa6.34□□□□□ -1.39
NUP58-207ENST00000465068 A8MUN3 132 aa6.33□□□□□ -1.4
NUP58-207ENST00000465068 CSAG1Q6PB30 78 aa6.33□□□□□ -1.4
NUP58-207ENST00000465068 DMAC1Q96GE9 116 aa6.28□□□□□ -1.4
NUP58-207ENST00000465068 SERP2Q8N6R1 65 aa6.26□□□□□ -1.41
NUP58-207ENST00000465068 KRTAP19-1Q8IUB9 90 aa6.25□□□□□ -1.41
NUP58-207ENST00000465068 SNURFQ9Y675 71 aa6.22□□□□□ -1.41
NUP58-207ENST00000465068 NDUFC1O43677 76 aa6.21□□□□□ -1.42
NUP58-207ENST00000465068 H0YAA0 97 aa6.19□□□□□ -1.42
NUP58-207ENST00000465068 C20orf197Q8N268 126 aa6.18□□□□□ -1.42
NUP58-207ENST00000465068 SPRR2GQ9BYE4 73 aa6.18□□□□□ -1.42
NUP58-207ENST00000465068 FCGBPQ9Y6R7 5405 aaPredicted RBP6.16□□□□□ -1.42
NUP58-207ENST00000465068 COX7CP15954 63 aa6.13□□□□□ -1.43
NUP58-207ENST00000465068 SPANXA2-OT1Q8N9U9 137 aa6.13□□□□□ -1.43
NUP58-207ENST00000465068 ACYP2P14621 99 aa6.11□□□□□ -1.43
NUP58-207ENST00000465068 KRTAP19-8Q3LI54 63 aa6.11□□□□□ -1.43
NUP58-207ENST00000465068 MT1BP07438 61 aa6.09□□□□□ -1.43
NUP58-207ENST00000465068 KRTAP19-6Q3LI70 58 aa6.09□□□□□ -1.43
NUP58-207ENST00000465068 CYSTM1Q9H1C7 97 aa6.09□□□□□ -1.43
NUP58-207ENST00000465068 ADM2Q7Z4H4 148 aa6.07□□□□□ -1.44
NUP58-207ENST00000465068 CRIPTQ9P021 101 aa6.07□□□□□ -1.44
NUP58-207ENST00000465068 H7BZZ5 65 aa6.03□□□□□ -1.44
NUP58-207ENST00000465068 P0C880 135 aa6.03□□□□□ -1.44
NUP58-207ENST00000465068 Q5VV11 94 aa5.97□□□□□ -1.45
NUP58-207ENST00000465068 ANAPC13Q9BS18 74 aa5.97□□□□□ -1.45
NUP58-207ENST00000465068 CCDC179H3BU77 68 aa5.94□□□□□ -1.46
NUP58-207ENST00000465068 KRTAP9-7A8MTY7 169 aa5.92□□□□□ -1.46
NUP58-207ENST00000465068 MACF1Q9UPN3 7388 aaKnown RBP5.92□□□□□ -1.46
NUP58-207ENST00000465068 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.91□□□□□ -1.46
NUP58-207ENST00000465068 CHKB-CPT1BH3BT56 60 aa5.91□□□□□ -1.46
NUP58-207ENST00000465068 COA5Q86WW8 74 aa5.91□□□□□ -1.46
NUP58-207ENST00000465068 SPTSSBQ8NFR3 76 aa5.91□□□□□ -1.46
NUP58-207ENST00000465068 KRTAP10-5P60370 271 aa5.86□□□□□ -1.47
NUP58-207ENST00000465068 R4GN34 69 aa5.84□□□□□ -1.47
NUP58-207ENST00000465068 SYNE2Q8WXH0 6885 aaKnown RBP5.83□□□□□ -1.48
NUP58-207ENST00000465068 M0QZ58 72 aa5.82□□□□□ -1.48
NUP58-207ENST00000465068 A6NN06 94 aa5.79□□□□□ -1.48
NUP58-207ENST00000465068 KRTAP13-4Q3LI77 160 aa5.77□□□□□ -1.49
NUP58-207ENST00000465068 MT1XP80297 61 aa5.76□□□□□ -1.49
NUP58-207ENST00000465068 ATP5EP56381 51 aaPredicted RBP5.7□□□□□ -1.5
NUP58-207ENST00000465068 PLAC4Q8WY50 150 aa5.7□□□□□ -1.5
NUP58-207ENST00000465068 LINC01554Q52M75 96 aa5.69□□□□□ -1.5
NUP58-207ENST00000465068 TMEM258P61165 79 aa5.67□□□□□ -1.5
NUP58-207ENST00000465068 KMT2DO14686 5537 aa5.61□□□□□ -1.51
NUP58-207ENST00000465068 SEC61GP60059 68 aa5.61□□□□□ -1.51
NUP58-207ENST00000465068 KRTAP6-3Q3LI67 103 aa5.61□□□□□ -1.51
NUP58-207ENST00000465068 SERP1Q9Y6X1 66 aa5.61□□□□□ -1.51
NUP58-207ENST00000465068 PRO2289Q9P1D8 64 aa5.6□□□□□ -1.51
NUP58-207ENST00000465068 A0A1B0GU33 70 aa5.59□□□□□ -1.51
NUP58-207ENST00000465068 SPATA8Q6RVD6 105 aa5.57□□□□□ -1.52
NUP58-207ENST00000465068 KRTAP12-2P59991 146 aa5.55□□□□□ -1.52
NUP58-207ENST00000465068 A0A1B0GU69 56 aa5.54□□□□□ -1.52
NUP58-207ENST00000465068 LINC01558Q9Y6Z2 57 aa5.54□□□□□ -1.52
NUP58-207ENST00000465068 MUC12Q9UKN1 5478 aa5.53□□□□□ -1.52
NUP58-207ENST00000465068 KRTAP5-9P26371 169 aa5.5□□□□□ -1.53
NUP58-207ENST00000465068 KRTAP10-7P60409 375 aaPredicted RBP5.49□□□□□ -1.53
NUP58-207ENST00000465068 A0A0D9SG42 100 aa5.48□□□□□ -1.53
NUP58-207ENST00000465068 KRTAP12-1P59990 96 aa5.48□□□□□ -1.53
NUP58-207ENST00000465068 NEBP20929 6669 aa5.47□□□□□ -1.53
NUP58-207ENST00000465068 KRTAP10-12P60413 245 aa5.47□□□□□ -1.53
NUP58-207ENST00000465068 KRTAP4-8A0A0G2JLE6 195 aa5.43□□□□□ -1.54
NUP58-207ENST00000465068 KRTAP4-8Q9BYQ9 185 aa5.43□□□□□ -1.54
NUP58-207ENST00000465068 MDN1Q9NU22 5596 aa5.43□□□□□ -1.54
NUP58-207ENST00000465068 A8MU10 97 aa5.42□□□□□ -1.54
NUP58-207ENST00000465068 PCP4P48539 62 aa5.41□□□□□ -1.54
NUP58-207ENST00000465068 PRR15LQ9BU68 103 aa5.4□□□□□ -1.54
NUP58-207ENST00000465068 SMIM26A0A096LP01 95 aa5.39□□□□□ -1.55
NUP58-207ENST00000465068 CAMK2N1Q7Z7J9 78 aa5.37□□□□□ -1.55
NUP58-207ENST00000465068 SPINT4Q6UDR6 99 aa5.36□□□□□ -1.55
NUP58-207ENST00000465068 Q1T7F1 81 aa5.34□□□□□ -1.55
NUP58-207ENST00000465068 KRTAP8-1Q8IUC2 63 aa5.33□□□□□ -1.56
NUP58-207ENST00000465068 LOC100996750A0A140TA64 210 aa5.31□□□□□ -1.56
NUP58-207ENST00000465068 KRTAP4-6Q9BYQ5 205 aa5.31□□□□□ -1.56
NUP58-207ENST00000465068 RPS28P62857 69 aaKnown RBP5.3□□□□□ -1.56
NUP58-207ENST00000465068 UQCR11O14957 56 aa5.29□□□□□ -1.56
NUP58-207ENST00000465068 SPRR2FQ96RM1 72 aa5.28□□□□□ -1.56
NUP58-207ENST00000465068 V9GYY9 64 aa5.27□□□□□ -1.57
NUP58-207ENST00000465068 PSPHP1O15172 72 aa5.24□□□□□ -1.57
NUP58-207ENST00000465068 C10orf95Q9H7T3 257 aa5.24□□□□□ -1.57
NUP58-207ENST00000465068 LCE1AQ5T7P2 110 aa5.21□□□□□ -1.58
NUP58-207ENST00000465068 MIR22HGQ0VDD5 57 aa5.2□□□□□ -1.58
NUP58-207ENST00000465068 KRTAP19-7Q3SYF9 63 aa5.17□□□□□ -1.58
NUP58-207ENST00000465068 SPRR2EP22531 72 aa5.14□□□□□ -1.59
NUP58-207ENST00000465068 SPRR2BP35325 72 aa5.14□□□□□ -1.59
NUP58-207ENST00000465068 SPRR2AP35326 72 aa5.14□□□□□ -1.59
NUP58-207ENST00000465068 KRTAP20-1Q3LI63 56 aa5.14□□□□□ -1.59
NUP58-207ENST00000465068 MT1EP04732 61 aa5.08□□□□□ -1.6
NUP58-207ENST00000465068 TNP1P09430 55 aa5.06□□□□□ -1.6
NUP58-207ENST00000465068 KRTAP19-5Q3LI72 72 aa5.04□□□□□ -1.6
NUP58-207ENST00000465068 LCE3AQ5TA76 89 aa5.03□□□□□ -1.6
NUP58-207ENST00000465068 A6NED7 52 aa5.02□□□□□ -1.61
NUP58-207ENST00000465068 LCE5AQ5TCM9 118 aa4.99□□□□□ -1.61
NUP58-207ENST00000465068 KRTAP2-3P0C7H8 128 aa4.98□□□□□ -1.61
NUP58-207ENST00000465068 KRTAP2-4Q9BYR9 128 aa4.98□□□□□ -1.61
NUP58-207ENST00000465068 SPRR2DP22532 72 aa4.96□□□□□ -1.62
NUP58-207ENST00000465068 KRTAP19-3Q7Z4W3 81 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms