RNA–Protein interactions for RNA: ENST00000464263.1

RAB11FIP3-208, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 329 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-208ENST00000464263 FAM236AA0A1B0GUQ0 79 aa7.16□□□□□ -1.26
RAB11FIP3-208ENST00000464263 FAM236BA0A1B0GV22 79 aa7.16□□□□□ -1.26
RAB11FIP3-208ENST00000464263 A8MUN3 132 aa7.14□□□□□ -1.27
RAB11FIP3-208ENST00000464263 SMIM20Q8N5G0 67 aa7.13□□□□□ -1.27
RAB11FIP3-208ENST00000464263 TRAV7A0A075B6U4 112 aa7.12□□□□□ -1.27
RAB11FIP3-208ENST00000464263 NDUFC1O43677 76 aa7.06□□□□□ -1.28
RAB11FIP3-208ENST00000464263 SSPOA2VEC9 5147 aa7.04□□□□□ -1.28
RAB11FIP3-208ENST00000464263 KRTAP19-1Q8IUB9 90 aa7.02□□□□□ -1.29
RAB11FIP3-208ENST00000464263 DMAC1Q96GE9 116 aa7.02□□□□□ -1.29
RAB11FIP3-208ENST00000464263 H0YAA0 97 aa6.97□□□□□ -1.29
RAB11FIP3-208ENST00000464263 SERP2Q8N6R1 65 aa6.96□□□□□ -1.3
RAB11FIP3-208ENST00000464263 SPRR2GQ9BYE4 73 aa6.95□□□□□ -1.3
RAB11FIP3-208ENST00000464263 SNURFQ9Y675 71 aa6.95□□□□□ -1.3
RAB11FIP3-208ENST00000464263 KRTAP19-6Q3LI70 58 aa6.92□□□□□ -1.3
RAB11FIP3-208ENST00000464263 ACYP2P14621 99 aa6.9□□□□□ -1.3
RAB11FIP3-208ENST00000464263 C20orf197Q8N268 126 aa6.9□□□□□ -1.3
RAB11FIP3-208ENST00000464263 CRIPTQ9P021 101 aa6.9□□□□□ -1.3
RAB11FIP3-208ENST00000464263 FCGBPQ9Y6R7 5405 aaPredicted RBP6.88□□□□□ -1.31
RAB11FIP3-208ENST00000464263 KRTAP19-8Q3LI54 63 aa6.88□□□□□ -1.31
RAB11FIP3-208ENST00000464263 ADM2Q7Z4H4 148 aa6.88□□□□□ -1.31
RAB11FIP3-208ENST00000464263 MT1BP07438 61 aa6.85□□□□□ -1.31
RAB11FIP3-208ENST00000464263 SPANXA2-OT1Q8N9U9 137 aa6.83□□□□□ -1.32
RAB11FIP3-208ENST00000464263 Q5VV11 94 aa6.82□□□□□ -1.32
RAB11FIP3-208ENST00000464263 COX7CP15954 63 aa6.81□□□□□ -1.32
RAB11FIP3-208ENST00000464263 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.78□□□□□ -1.32
RAB11FIP3-208ENST00000464263 KRTAP3-2Q9BYR7 98 aa6.78□□□□□ -1.32
RAB11FIP3-208ENST00000464263 P0C880 135 aa6.77□□□□□ -1.33
RAB11FIP3-208ENST00000464263 SPTSSBQ8NFR3 76 aa6.74□□□□□ -1.33
RAB11FIP3-208ENST00000464263 CHKB-CPT1BH3BT56 60 aa6.73□□□□□ -1.33
RAB11FIP3-208ENST00000464263 CYSTM1Q9H1C7 97 aa6.69□□□□□ -1.34
RAB11FIP3-208ENST00000464263 H7BZZ5 65 aa6.67□□□□□ -1.34
RAB11FIP3-208ENST00000464263 R4GN34 69 aa6.67□□□□□ -1.34
RAB11FIP3-208ENST00000464263 ANAPC13Q9BS18 74 aa6.66□□□□□ -1.34
RAB11FIP3-208ENST00000464263 A6NN06 94 aa6.65□□□□□ -1.34
RAB11FIP3-208ENST00000464263 KRTAP10-5P60370 271 aa6.64□□□□□ -1.35
RAB11FIP3-208ENST00000464263 M0QZ58 72 aa6.63□□□□□ -1.35
RAB11FIP3-208ENST00000464263 COA5Q86WW8 74 aa6.62□□□□□ -1.35
RAB11FIP3-208ENST00000464263 KRTAP9-7A8MTY7 169 aa6.61□□□□□ -1.35
RAB11FIP3-208ENST00000464263 MACF1Q9UPN3 7388 aaKnown RBP6.58□□□□□ -1.36
RAB11FIP3-208ENST00000464263 CCDC179H3BU77 68 aa6.55□□□□□ -1.36
RAB11FIP3-208ENST00000464263 PLAC4Q8WY50 150 aa6.54□□□□□ -1.36
RAB11FIP3-208ENST00000464263 LINC01554Q52M75 96 aa6.51□□□□□ -1.37
RAB11FIP3-208ENST00000464263 SYNE2Q8WXH0 6885 aaKnown RBP6.51□□□□□ -1.37
RAB11FIP3-208ENST00000464263 MT1XP80297 61 aa6.47□□□□□ -1.37
RAB11FIP3-208ENST00000464263 PRO2289Q9P1D8 64 aa6.44□□□□□ -1.38
RAB11FIP3-208ENST00000464263 KRTAP13-4Q3LI77 160 aa6.43□□□□□ -1.38
RAB11FIP3-208ENST00000464263 KRTAP6-3Q3LI67 103 aa6.42□□□□□ -1.38
RAB11FIP3-208ENST00000464263 SEC61GP60059 68 aa6.4□□□□□ -1.38
RAB11FIP3-208ENST00000464263 SERP1Q9Y6X1 66 aa6.4□□□□□ -1.38
RAB11FIP3-208ENST00000464263 ATP5EP56381 51 aaPredicted RBP6.37□□□□□ -1.39
RAB11FIP3-208ENST00000464263 A0A1B0GU33 70 aa6.3□□□□□ -1.4
RAB11FIP3-208ENST00000464263 TMEM258P61165 79 aa6.29□□□□□ -1.4
RAB11FIP3-208ENST00000464263 A0A1B0GU69 56 aa6.27□□□□□ -1.41
RAB11FIP3-208ENST00000464263 KRTAP12-2P59991 146 aa6.27□□□□□ -1.41
RAB11FIP3-208ENST00000464263 SPATA8Q6RVD6 105 aa6.26□□□□□ -1.41
RAB11FIP3-208ENST00000464263 KRTAP5-9P26371 169 aa6.23□□□□□ -1.41
RAB11FIP3-208ENST00000464263 KMT2DO14686 5537 aa6.2□□□□□ -1.42
RAB11FIP3-208ENST00000464263 A0A0D9SG42 100 aa6.2□□□□□ -1.42
RAB11FIP3-208ENST00000464263 KRTAP10-7P60409 375 aaPredicted RBP6.18□□□□□ -1.42
RAB11FIP3-208ENST00000464263 LINC01558Q9Y6Z2 57 aa6.17□□□□□ -1.42
RAB11FIP3-208ENST00000464263 KRTAP10-12P60413 245 aa6.16□□□□□ -1.42
RAB11FIP3-208ENST00000464263 CAMK2N1Q7Z7J9 78 aa6.16□□□□□ -1.42
RAB11FIP3-208ENST00000464263 KRTAP4-8A0A0G2JLE6 195 aa6.13□□□□□ -1.43
RAB11FIP3-208ENST00000464263 KRTAP12-1P59990 96 aa6.13□□□□□ -1.43
RAB11FIP3-208ENST00000464263 KRTAP4-8Q9BYQ9 185 aa6.13□□□□□ -1.43
RAB11FIP3-208ENST00000464263 MUC12Q9UKN1 5478 aa6.13□□□□□ -1.43
RAB11FIP3-208ENST00000464263 PRR15LQ9BU68 103 aa6.12□□□□□ -1.43
RAB11FIP3-208ENST00000464263 SPINT4Q6UDR6 99 aa6.11□□□□□ -1.43
RAB11FIP3-208ENST00000464263 KRTAP8-1Q8IUC2 63 aa6.11□□□□□ -1.43
RAB11FIP3-208ENST00000464263 SMIM26A0A096LP01 95 aa6.1□□□□□ -1.43
RAB11FIP3-208ENST00000464263 NEBP20929 6669 aa6.08□□□□□ -1.44
RAB11FIP3-208ENST00000464263 A8MU10 97 aa6.08□□□□□ -1.44
RAB11FIP3-208ENST00000464263 SPRR2FQ96RM1 72 aa6.06□□□□□ -1.44
RAB11FIP3-208ENST00000464263 MDN1Q9NU22 5596 aa5.99□□□□□ -1.45
RAB11FIP3-208ENST00000464263 UQCR11O14957 56 aa5.95□□□□□ -1.46
RAB11FIP3-208ENST00000464263 SPRR2EP22531 72 aa5.92□□□□□ -1.46
RAB11FIP3-208ENST00000464263 SPRR2BP35325 72 aa5.92□□□□□ -1.46
RAB11FIP3-208ENST00000464263 SPRR2AP35326 72 aa5.92□□□□□ -1.46
RAB11FIP3-208ENST00000464263 PCP4P48539 62 aa5.92□□□□□ -1.46
RAB11FIP3-208ENST00000464263 Q1T7F1 81 aa5.91□□□□□ -1.46
RAB11FIP3-208ENST00000464263 LCE1AQ5T7P2 110 aa5.9□□□□□ -1.46
RAB11FIP3-208ENST00000464263 V9GYY9 64 aa5.9□□□□□ -1.46
RAB11FIP3-208ENST00000464263 PSPHP1O15172 72 aa5.85□□□□□ -1.47
RAB11FIP3-208ENST00000464263 C10orf95Q9H7T3 257 aa5.85□□□□□ -1.47
RAB11FIP3-208ENST00000464263 MIR22HGQ0VDD5 57 aa5.84□□□□□ -1.47
RAB11FIP3-208ENST00000464263 RPS28P62857 69 aaKnown RBP5.81□□□□□ -1.48
RAB11FIP3-208ENST00000464263 KRTAP20-1Q3LI63 56 aa5.81□□□□□ -1.48
RAB11FIP3-208ENST00000464263 KRTAP19-7Q3SYF9 63 aa5.79□□□□□ -1.48
RAB11FIP3-208ENST00000464263 TNP1P09430 55 aa5.75□□□□□ -1.49
RAB11FIP3-208ENST00000464263 KRTAP2-3P0C7H8 128 aa5.75□□□□□ -1.49
RAB11FIP3-208ENST00000464263 KRTAP2-4Q9BYR9 128 aa5.75□□□□□ -1.49
RAB11FIP3-208ENST00000464263 SPRR2DP22532 72 aa5.72□□□□□ -1.49
RAB11FIP3-208ENST00000464263 MT1EP04732 61 aa5.71□□□□□ -1.5
RAB11FIP3-208ENST00000464263 KRTAP19-5Q3LI72 72 aa5.69□□□□□ -1.5
RAB11FIP3-208ENST00000464263 LCE3AQ5TA76 89 aa5.66□□□□□ -1.5
RAB11FIP3-208ENST00000464263 A6NED7 52 aa5.65□□□□□ -1.5
RAB11FIP3-208ENST00000464263 K7ERS5 55 aa5.65□□□□□ -1.5
RAB11FIP3-208ENST00000464263 KRTAP19-3Q7Z4W3 81 aa5.62□□□□□ -1.51
RAB11FIP3-208ENST00000464263 LCE5AQ5TCM9 118 aa5.61□□□□□ -1.51
RAB11FIP3-208ENST00000464263 KRTAP2-2Q9BYT5 123 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms