RNA–Protein interactions for RNA: ENST00000464256.1

PAXBP1-206, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 1,692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-206ENST00000464256 KRTAP10-10P60014 251 aa12.01□□□□□ -0.49
PAXBP1-206ENST00000464256 C20orf197Q8N268 126 aa11.96□□□□□ -0.5
PAXBP1-206ENST00000464256 CCDC179H3BU77 68 aa11.94□□□□□ -0.5
PAXBP1-206ENST00000464256 KRTAP3-3Q9BYR6 98 aa11.94□□□□□ -0.5
PAXBP1-206ENST00000464256 SNURFQ9Y675 71 aa11.94□□□□□ -0.5
PAXBP1-206ENST00000464256 KRTAP9-3Q9BYQ3 159 aa11.92□□□□□ -0.5
PAXBP1-206ENST00000464256 USH2AO75445 5202 aa11.91□□□□□ -0.5
PAXBP1-206ENST00000464256 CSAG1Q6PB30 78 aa11.84□□□□□ -0.51
PAXBP1-206ENST00000464256 LCE2BO14633 110 aa11.81□□□□□ -0.52
PAXBP1-206ENST00000464256 KRTAP9-6A0A140TA67 174 aa11.78□□□□□ -0.52
PAXBP1-206ENST00000464256 NDUFC1O43677 76 aa11.78□□□□□ -0.52
PAXBP1-206ENST00000464256 A8MUN3 132 aa11.78□□□□□ -0.52
PAXBP1-206ENST00000464256 CRCT1Q9UGL9 99 aa11.75□□□□□ -0.53
PAXBP1-206ENST00000464256 CYSTM1Q9H1C7 97 aa11.74□□□□□ -0.53
PAXBP1-206ENST00000464256 SSPOA2VEC9 5147 aa11.72□□□□□ -0.53
PAXBP1-206ENST00000464256 DMAC1Q96GE9 116 aa11.7□□□□□ -0.54
PAXBP1-206ENST00000464256 H7BZZ5 65 aa11.68□□□□□ -0.54
PAXBP1-206ENST00000464256 SPANXA2-OT1Q8N9U9 137 aa11.6□□□□□ -0.55
PAXBP1-206ENST00000464256 TMEM258P61165 79 aa11.56□□□□□ -0.56
PAXBP1-206ENST00000464256 KRTAP19-1Q8IUB9 90 aa11.53□□□□□ -0.56
PAXBP1-206ENST00000464256 ATP5EP56381 51 aaPredicted RBP11.48□□□□□ -0.57
PAXBP1-206ENST00000464256 ACYP2P14621 99 aa11.45□□□□□ -0.58
PAXBP1-206ENST00000464256 H0YAA0 97 aa11.42□□□□□ -0.58
PAXBP1-206ENST00000464256 ADM2Q7Z4H4 148 aa11.42□□□□□ -0.58
PAXBP1-206ENST00000464256 SPRR2GQ9BYE4 73 aa11.38□□□□□ -0.59
PAXBP1-206ENST00000464256 FCGBPQ9Y6R7 5405 aaPredicted RBP11.33□□□□□ -0.6
PAXBP1-206ENST00000464256 P0C880 135 aa11.29□□□□□ -0.6
PAXBP1-206ENST00000464256 CHKB-CPT1BH3BT56 60 aa11.27□□□□□ -0.61
PAXBP1-206ENST00000464256 COA5Q86WW8 74 aa11.27□□□□□ -0.61
PAXBP1-206ENST00000464256 MT1BP07438 61 aa11.26□□□□□ -0.61
PAXBP1-206ENST00000464256 KRTAP3-2Q9BYR7 98 aa11.26□□□□□ -0.61
PAXBP1-206ENST00000464256 KRTAP19-8Q3LI54 63 aa11.24□□□□□ -0.61
PAXBP1-206ENST00000464256 CRIPTQ9P021 101 aa11.23□□□□□ -0.61
PAXBP1-206ENST00000464256 KRTAP19-6Q3LI70 58 aa11.22□□□□□ -0.61
PAXBP1-206ENST00000464256 SERP1Q9Y6X1 66 aa11.2□□□□□ -0.62
PAXBP1-206ENST00000464256 Q5VV11 94 aa11.16□□□□□ -0.62
PAXBP1-206ENST00000464256 SPTSSBQ8NFR3 76 aa11.13□□□□□ -0.63
PAXBP1-206ENST00000464256 RPS28P62857 69 aaKnown RBP11.12□□□□□ -0.63
PAXBP1-206ENST00000464256 R4GN34 69 aa11.02□□□□□ -0.64
PAXBP1-206ENST00000464256 M0QZ58 72 aa11.01□□□□□ -0.65
PAXBP1-206ENST00000464256 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.95□□□□□ -0.66
PAXBP1-206ENST00000464256 SMIM26A0A096LP01 95 aa10.89□□□□□ -0.67
PAXBP1-206ENST00000464256 MACF1Q9UPN3 7388 aaKnown RBP10.89□□□□□ -0.67
PAXBP1-206ENST00000464256 LINC01554Q52M75 96 aa10.87□□□□□ -0.67
PAXBP1-206ENST00000464256 A6NN06 94 aa10.86□□□□□ -0.67
PAXBP1-206ENST00000464256 KRTAP10-5P60370 271 aa10.84□□□□□ -0.67
PAXBP1-206ENST00000464256 KRTAP13-4Q3LI77 160 aa10.77□□□□□ -0.69
PAXBP1-206ENST00000464256 V9GYY9 64 aa10.75□□□□□ -0.69
PAXBP1-206ENST00000464256 SYNE2Q8WXH0 6885 aaKnown RBP10.73□□□□□ -0.69
PAXBP1-206ENST00000464256 Q1T7F1 81 aa10.72□□□□□ -0.69
PAXBP1-206ENST00000464256 PLAC4Q8WY50 150 aa10.72□□□□□ -0.69
PAXBP1-206ENST00000464256 SEC61GP60059 68 aa10.71□□□□□ -0.69
PAXBP1-206ENST00000464256 LINC01558Q9Y6Z2 57 aa10.69□□□□□ -0.7
PAXBP1-206ENST00000464256 KRTAP9-7A8MTY7 169 aa10.66□□□□□ -0.7
PAXBP1-206ENST00000464256 MT1XP80297 61 aa10.66□□□□□ -0.7
PAXBP1-206ENST00000464256 A0A1B0GU69 56 aa10.65□□□□□ -0.7
PAXBP1-206ENST00000464256 PRR15LQ9BU68 103 aa10.6□□□□□ -0.71
PAXBP1-206ENST00000464256 SPATA8Q6RVD6 105 aa10.53□□□□□ -0.72
PAXBP1-206ENST00000464256 PSPHP1O15172 72 aa10.5□□□□□ -0.73
PAXBP1-206ENST00000464256 A0A1B0GU33 70 aa10.5□□□□□ -0.73
PAXBP1-206ENST00000464256 PRO2289Q9P1D8 64 aa10.48□□□□□ -0.73
PAXBP1-206ENST00000464256 KMT2DO14686 5537 aa10.44□□□□□ -0.74
PAXBP1-206ENST00000464256 A0A0D9SG42 100 aa10.43□□□□□ -0.74
PAXBP1-206ENST00000464256 KRTAP6-3Q3LI67 103 aa10.32□□□□□ -0.76
PAXBP1-206ENST00000464256 UQCR11O14957 56 aa10.26□□□□□ -0.77
PAXBP1-206ENST00000464256 A8MU10 97 aa10.25□□□□□ -0.77
PAXBP1-206ENST00000464256 KRTAP10-7P60409 375 aaPredicted RBP10.23□□□□□ -0.77
PAXBP1-206ENST00000464256 A6NED7 52 aa10.22□□□□□ -0.77
PAXBP1-206ENST00000464256 KRTAP12-1P59990 96 aa10.22□□□□□ -0.77
PAXBP1-206ENST00000464256 SPINT4Q6UDR6 99 aa10.21□□□□□ -0.78
PAXBP1-206ENST00000464256 KRTAP12-2P59991 146 aa10.2□□□□□ -0.78
PAXBP1-206ENST00000464256 CAMK2N1Q7Z7J9 78 aa10.2□□□□□ -0.78
PAXBP1-206ENST00000464256 MUC12Q9UKN1 5478 aa10.17□□□□□ -0.78
PAXBP1-206ENST00000464256 KRTAP4-8A0A0G2JLE6 195 aa10.13□□□□□ -0.79
PAXBP1-206ENST00000464256 KRTAP4-8Q9BYQ9 185 aa10.13□□□□□ -0.79
PAXBP1-206ENST00000464256 MIR22HGQ0VDD5 57 aa10.12□□□□□ -0.79
PAXBP1-206ENST00000464256 KRTAP10-12P60413 245 aa10.09□□□□□ -0.79
PAXBP1-206ENST00000464256 KRTAP5-9P26371 169 aa10.07□□□□□ -0.8
PAXBP1-206ENST00000464256 CDC42SE1Q9NRR8 79 aa10.01□□□□□ -0.81
PAXBP1-206ENST00000464256 KRTAP8-1Q8IUC2 63 aa9.99□□□□□ -0.81
PAXBP1-206ENST00000464256 MDN1Q9NU22 5596 aa9.97□□□□□ -0.81
PAXBP1-206ENST00000464256 BRK1Q8WUW1 75 aa9.96□□□□□ -0.81
PAXBP1-206ENST00000464256 NEBP20929 6669 aa9.93□□□□□ -0.82
PAXBP1-206ENST00000464256 SPRR2FQ96RM1 72 aa9.93□□□□□ -0.82
PAXBP1-206ENST00000464256 K7ERS5 55 aa9.76□□□□□ -0.85
PAXBP1-206ENST00000464256 C10orf95Q9H7T3 257 aa9.76□□□□□ -0.85
PAXBP1-206ENST00000464256 PRO0628Q9UI54 55 aa9.67□□□□□ -0.86
PAXBP1-206ENST00000464256 SPRR2EP22531 72 aa9.65□□□□□ -0.86
PAXBP1-206ENST00000464256 SPRR2BP35325 72 aa9.65□□□□□ -0.86
PAXBP1-206ENST00000464256 SPRR2AP35326 72 aa9.65□□□□□ -0.86
PAXBP1-206ENST00000464256 LCE1AQ5T7P2 110 aa9.61□□□□□ -0.87
PAXBP1-206ENST00000464256 KRTAP19-7Q3SYF9 63 aa9.54□□□□□ -0.88
PAXBP1-206ENST00000464256 TNP1P09430 55 aa9.5□□□□□ -0.89
PAXBP1-206ENST00000464256 PMAIP1Q13794 54 aa9.44□□□□□ -0.9
PAXBP1-206ENST00000464256 LCE3AQ5TA76 89 aa9.44□□□□□ -0.9
PAXBP1-206ENST00000464256 KRTAP19-5Q3LI72 72 aa9.42□□□□□ -0.9
PAXBP1-206ENST00000464256 MT1EP04732 61 aa9.4□□□□□ -0.9
PAXBP1-206ENST00000464256 KRTAP20-1Q3LI63 56 aa9.36□□□□□ -0.91
PAXBP1-206ENST00000464256 SPRR2DP22532 72 aa9.31□□□□□ -0.92
PAXBP1-206ENST00000464256 ROMO1P60602 79 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms