RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 IGKV2D-30A0A075B6S6 120 aa5.39□□□□□ -1.55
PTPRD-207ENST00000463477 A8MUU9 505 aa5.39□□□□□ -1.55
PTPRD-207ENST00000463477 C20orf166-AS1Q96NR2 134 aa5.39□□□□□ -1.55
PTPRD-207ENST00000463477 TPRXLQ17RH7 258 aa5.38□□□□□ -1.55
PTPRD-207ENST00000463477 A6NED7 52 aa5.36□□□□□ -1.55
PTPRD-207ENST00000463477 CDC42SE1Q9NRR8 79 aa5.35□□□□□ -1.55
PTPRD-207ENST00000463477 LCA10Q71F78 164 aa5.34□□□□□ -1.56
PTPRD-207ENST00000463477 MUC2Q02817 5179 aa5.34□□□□□ -1.56
PTPRD-207ENST00000463477 ATP11AUNQ6ZP68 121 aa5.33□□□□□ -1.56
PTPRD-207ENST00000463477 A8MU10 97 aa5.29□□□□□ -1.56
PTPRD-207ENST00000463477 SPINK7P58062 85 aa5.29□□□□□ -1.56
PTPRD-207ENST00000463477 C9orf92A6NGG3 77 aa5.28□□□□□ -1.56
PTPRD-207ENST00000463477 MUC17Q685J3 4493 aa5.28□□□□□ -1.56
PTPRD-207ENST00000463477 A0A1B0GU69 56 aa5.28□□□□□ -1.56
PTPRD-207ENST00000463477 SPTSSBQ8NFR3 76 aa5.25□□□□□ -1.57
PTPRD-207ENST00000463477 PMAIP1Q13794 54 aa5.24□□□□□ -1.57
PTPRD-207ENST00000463477 XP32Q5T750 250 aa5.23□□□□□ -1.57
PTPRD-207ENST00000463477 SPATA8Q6RVD6 105 aa5.21□□□□□ -1.57
PTPRD-207ENST00000463477 A6NN06 94 aa5.21□□□□□ -1.58
PTPRD-207ENST00000463477 SEC61BP60468 96 aaKnown RBP5.21□□□□□ -1.58
PTPRD-207ENST00000463477 UQCR11O14957 56 aa5.2□□□□□ -1.58
PTPRD-207ENST00000463477 KRTAP3-1Q9BYR8 98 aa5.19□□□□□ -1.58
PTPRD-207ENST00000463477 COX6B2Q6YFQ2 88 aa5.17□□□□□ -1.58
PTPRD-207ENST00000463477 RPL37P61927 97 aaKnown RBP5.16□□□□□ -1.58
PTPRD-207ENST00000463477 KTN1-AS1Q86SY8 53 aa5.16□□□□□ -1.58
PTPRD-207ENST00000463477 SEC61GP60059 68 aa5.15□□□□□ -1.58
PTPRD-207ENST00000463477 MIR22HGQ0VDD5 57 aa5.15□□□□□ -1.59
PTPRD-207ENST00000463477 KRTAP4-1Q9BYQ7 146 aa5.13□□□□□ -1.59
PTPRD-207ENST00000463477 FAT4Q6V0I7 4981 aa5.13□□□□□ -1.59
PTPRD-207ENST00000463477 A0A1B0GU33 70 aa5.02□□□□□ -1.61
PTPRD-207ENST00000463477 H1FX-AS1Q4G0G2 97 aa5.02□□□□□ -1.61
PTPRD-207ENST00000463477 H0YAA0 97 aa5.01□□□□□ -1.61
PTPRD-207ENST00000463477 KRTAP19-2Q3LHN2 52 aa5□□□□□ -1.61
PTPRD-207ENST00000463477 S4R3F8 94 aa4.97□□□□□ -1.61
PTPRD-207ENST00000463477 RBM12B-AS1Q9P1G2 102 aa4.94□□□□□ -1.62
PTPRD-207ENST00000463477 KRTAP10-6P60371 365 aaPredicted RBP4.92□□□□□ -1.62
PTPRD-207ENST00000463477 KRTAP4-8Q9BYQ9 185 aa4.92□□□□□ -1.62
PTPRD-207ENST00000463477 MT1HP80294 61 aa4.91□□□□□ -1.62
PTPRD-207ENST00000463477 FLGP20930 4061 aaPredicted RBP4.89□□□□□ -1.63
PTPRD-207ENST00000463477 K7ERS5 55 aa4.86□□□□□ -1.63
PTPRD-207ENST00000463477 ADM2Q7Z4H4 148 aa4.85□□□□□ -1.63
PTPRD-207ENST00000463477 PRAC1Q96KF2 57 aa4.85□□□□□ -1.63
PTPRD-207ENST00000463477 KRTAP9-2Q9BYQ4 174 aa4.83□□□□□ -1.64
PTPRD-207ENST00000463477 CSAG1Q6PB30 78 aa4.83□□□□□ -1.64
PTPRD-207ENST00000463477 M0R2T5 61 aa4.82□□□□□ -1.64
PTPRD-207ENST00000463477 KRTAP13-4Q3LI77 160 aa4.8□□□□□ -1.64
PTPRD-207ENST00000463477 P0C880 135 aa4.8□□□□□ -1.64
PTPRD-207ENST00000463477 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.79□□□□□ -1.64
PTPRD-207ENST00000463477 KRTAP9-6A0A140TA67 174 aa4.78□□□□□ -1.64
PTPRD-207ENST00000463477 KRTAP4-12Q9BQ66 201 aa4.76□□□□□ -1.65
PTPRD-207ENST00000463477 M0QZ58 72 aa4.75□□□□□ -1.65
PTPRD-207ENST00000463477 LINC01554Q52M75 96 aa4.74□□□□□ -1.65
PTPRD-207ENST00000463477 LCE3BQ5TA77 95 aa4.73□□□□□ -1.65
PTPRD-207ENST00000463477 ROMO1P60602 79 aa4.72□□□□□ -1.65
PTPRD-207ENST00000463477 KRTAP25-1Q3LHN0 102 aa4.71□□□□□ -1.66
PTPRD-207ENST00000463477 A0A0D9SG42 100 aa4.7□□□□□ -1.66
PTPRD-207ENST00000463477 KRTAP19-1Q8IUB9 90 aa4.69□□□□□ -1.66
PTPRD-207ENST00000463477 KRTAP9-8Q9BYQ0 159 aa4.69□□□□□ -1.66
PTPRD-207ENST00000463477 H3BS24 57 aa4.67□□□□□ -1.66
PTPRD-207ENST00000463477 KRTAP12-1P59990 96 aa4.67□□□□□ -1.66
PTPRD-207ENST00000463477 FSIP2Q5CZC0 6907 aa4.65□□□□□ -1.67
PTPRD-207ENST00000463477 KRTAP12-2P59991 146 aa4.64□□□□□ -1.67
PTPRD-207ENST00000463477 MT2AP02795 61 aa4.61□□□□□ -1.67
PTPRD-207ENST00000463477 CRCT1Q9UGL9 99 aa4.59□□□□□ -1.67
PTPRD-207ENST00000463477 SPINT4Q6UDR6 99 aa4.58□□□□□ -1.68
PTPRD-207ENST00000463477 R4GN34 69 aa4.58□□□□□ -1.68
PTPRD-207ENST00000463477 MT1FP04733 61 aa4.57□□□□□ -1.68
PTPRD-207ENST00000463477 KRTAP9-9Q9BYP9 154 aa4.57□□□□□ -1.68
PTPRD-207ENST00000463477 KRTAP9-4Q9BYQ2 154 aa4.57□□□□□ -1.68
PTPRD-207ENST00000463477 KRTAP19-4Q3LI73 84 aa4.56□□□□□ -1.68
PTPRD-207ENST00000463477 KRTAP10-10P60014 251 aa4.55□□□□□ -1.68
PTPRD-207ENST00000463477 KRTAP5-3Q6L8H2 238 aa4.54□□□□□ -1.68
PTPRD-207ENST00000463477 KRTAP9-3Q9BYQ3 159 aa4.54□□□□□ -1.68
PTPRD-207ENST00000463477 USH2AO75445 5202 aa4.53□□□□□ -1.68
PTPRD-207ENST00000463477 CRIPTQ9P021 101 aa4.52□□□□□ -1.69
PTPRD-207ENST00000463477 KRTAP4-8A0A0G2JLE6 195 aa4.5□□□□□ -1.69
PTPRD-207ENST00000463477 SSPOA2VEC9 5147 aa4.45□□□□□ -1.7
PTPRD-207ENST00000463477 C10orf95Q9H7T3 257 aa4.44□□□□□ -1.7
PTPRD-207ENST00000463477 LCE1DQ5T752 114 aa4.42□□□□□ -1.7
PTPRD-207ENST00000463477 FCGBPQ9Y6R7 5405 aaPredicted RBP4.35□□□□□ -1.71
PTPRD-207ENST00000463477 KRTAP4-7Q9BYR0 210 aa4.34□□□□□ -1.71
PTPRD-207ENST00000463477 KRTAP19-6Q3LI70 58 aa4.32□□□□□ -1.72
PTPRD-207ENST00000463477 CAMK2N1Q7Z7J9 78 aa4.32□□□□□ -1.72
PTPRD-207ENST00000463477 LCE4AQ5TA78 99 aa4.31□□□□□ -1.72
PTPRD-207ENST00000463477 SPRR2GQ9BYE4 73 aa4.3□□□□□ -1.72
PTPRD-207ENST00000463477 PP632Q6XCG6 107 aa4.29□□□□□ -1.72
PTPRD-207ENST00000463477 KRTAP15-1Q3LI76 137 aa4.27□□□□□ -1.73
PTPRD-207ENST00000463477 KRTAP4-9Q9BYQ8 210 aa4.27□□□□□ -1.73
PTPRD-207ENST00000463477 KRTAP9-7A8MTY7 169 aa4.26□□□□□ -1.73
PTPRD-207ENST00000463477 KRTAP19-8Q3LI54 63 aa4.26□□□□□ -1.73
PTPRD-207ENST00000463477 KRTAP23-1A1A580 65 aa4.25□□□□□ -1.73
PTPRD-207ENST00000463477 MT1BP07438 61 aa4.22□□□□□ -1.73
PTPRD-207ENST00000463477 TNP1P09430 55 aa4.19□□□□□ -1.74
PTPRD-207ENST00000463477 PLAC4Q8WY50 150 aa4.19□□□□□ -1.74
PTPRD-207ENST00000463477 MACF1Q9UPN3 7388 aaKnown RBP4.17□□□□□ -1.74
PTPRD-207ENST00000463477 LCE5AQ5TCM9 118 aa4.15□□□□□ -1.75
PTPRD-207ENST00000463477 SYNE2Q8WXH0 6885 aaKnown RBP4.14□□□□□ -1.75
PTPRD-207ENST00000463477 A0A0A0MQY5 61 aa4.13□□□□□ -1.75
PTPRD-207ENST00000463477 KRTAP4-11Q9BYQ6 195 aa4.13□□□□□ -1.75
PTPRD-207ENST00000463477 KRTAP4-2Q9BYR5 136 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms