RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 DMAC1Q96GE9 116 aa6.72□□□□□ -1.33
PHACTR4-203ENST00000463428 CCDC179H3BU77 68 aa6.71□□□□□ -1.34
PHACTR4-203ENST00000463428 KRTAP10-6P60371 365 aaPredicted RBP6.71□□□□□ -1.34
PHACTR4-203ENST00000463428 LORP23490 312 aaPredicted RBP6.7□□□□□ -1.34
PHACTR4-203ENST00000463428 SPANXA2-OT1Q8N9U9 137 aa6.7□□□□□ -1.34
PHACTR4-203ENST00000463428 S4R3F8 94 aa6.69□□□□□ -1.34
PHACTR4-203ENST00000463428 H7BZZ5 65 aa6.68□□□□□ -1.34
PHACTR4-203ENST00000463428 LCA10Q71F78 164 aa6.68□□□□□ -1.34
PHACTR4-203ENST00000463428 NDUFC1O43677 76 aa6.67□□□□□ -1.34
PHACTR4-203ENST00000463428 KRTAP9-8Q9BYQ0 159 aa6.63□□□□□ -1.35
PHACTR4-203ENST00000463428 ACYP2P14621 99 aa6.62□□□□□ -1.35
PHACTR4-203ENST00000463428 CSAG1Q6PB30 78 aa6.59□□□□□ -1.35
PHACTR4-203ENST00000463428 MT2AP02795 61 aa6.56□□□□□ -1.36
PHACTR4-203ENST00000463428 MT1FP04733 61 aa6.51□□□□□ -1.37
PHACTR4-203ENST00000463428 KRTAP4-8Q9BYQ9 185 aa6.51□□□□□ -1.37
PHACTR4-203ENST00000463428 COA5Q86WW8 74 aa6.47□□□□□ -1.37
PHACTR4-203ENST00000463428 CHKB-CPT1BH3BT56 60 aa6.46□□□□□ -1.38
PHACTR4-203ENST00000463428 PCP4P48539 62 aa6.46□□□□□ -1.38
PHACTR4-203ENST00000463428 KRTAP10-10P60014 251 aa6.45□□□□□ -1.38
PHACTR4-203ENST00000463428 TMEM258P61165 79 aa6.45□□□□□ -1.38
PHACTR4-203ENST00000463428 H0YAA0 97 aa6.44□□□□□ -1.38
PHACTR4-203ENST00000463428 ATP5EP56381 51 aaPredicted RBP6.44□□□□□ -1.38
PHACTR4-203ENST00000463428 SPTSSBQ8NFR3 76 aa6.42□□□□□ -1.38
PHACTR4-203ENST00000463428 KRTAP9-3Q9BYQ3 159 aa6.41□□□□□ -1.38
PHACTR4-203ENST00000463428 KRTAP9-2Q9BYQ4 174 aa6.37□□□□□ -1.39
PHACTR4-203ENST00000463428 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.36□□□□□ -1.39
PHACTR4-203ENST00000463428 ADM2Q7Z4H4 148 aa6.36□□□□□ -1.39
PHACTR4-203ENST00000463428 KRTAP9-6A0A140TA67 174 aa6.32□□□□□ -1.4
PHACTR4-203ENST00000463428 P0C880 135 aa6.31□□□□□ -1.4
PHACTR4-203ENST00000463428 KRTAP19-1Q8IUB9 90 aa6.29□□□□□ -1.4
PHACTR4-203ENST00000463428 CRIPTQ9P021 101 aa6.26□□□□□ -1.41
PHACTR4-203ENST00000463428 SPRR2GQ9BYE4 73 aa6.25□□□□□ -1.41
PHACTR4-203ENST00000463428 SERP1Q9Y6X1 66 aa6.25□□□□□ -1.41
PHACTR4-203ENST00000463428 LCE3BQ5TA77 95 aa6.19□□□□□ -1.42
PHACTR4-203ENST00000463428 USH2AO75445 5202 aa6.19□□□□□ -1.42
PHACTR4-203ENST00000463428 KRTAP19-8Q3LI54 63 aa6.16□□□□□ -1.42
PHACTR4-203ENST00000463428 SEC61GP60059 68 aa6.15□□□□□ -1.43
PHACTR4-203ENST00000463428 R4GN34 69 aa6.15□□□□□ -1.43
PHACTR4-203ENST00000463428 LINC01558Q9Y6Z2 57 aa6.14□□□□□ -1.43
PHACTR4-203ENST00000463428 M0QZ58 72 aa6.12□□□□□ -1.43
PHACTR4-203ENST00000463428 A0A1B0GU69 56 aa6.11□□□□□ -1.43
PHACTR4-203ENST00000463428 RPS28P62857 69 aaKnown RBP6.11□□□□□ -1.43
PHACTR4-203ENST00000463428 MT1BP07438 61 aa6.1□□□□□ -1.43
PHACTR4-203ENST00000463428 KRTAP4-12Q9BQ66 201 aa6.09□□□□□ -1.43
PHACTR4-203ENST00000463428 FSIP2Q5CZC0 6907 aa6.09□□□□□ -1.44
PHACTR4-203ENST00000463428 KRTAP13-4Q3LI77 160 aa6.08□□□□□ -1.44
PHACTR4-203ENST00000463428 Q5VV11 94 aa6.07□□□□□ -1.44
PHACTR4-203ENST00000463428 A0A1B0GU33 70 aa6.05□□□□□ -1.44
PHACTR4-203ENST00000463428 SMIM26A0A096LP01 95 aa6.04□□□□□ -1.44
PHACTR4-203ENST00000463428 KRTAP4-8A0A0G2JLE6 195 aa6.04□□□□□ -1.44
PHACTR4-203ENST00000463428 H3BS24 57 aa6.04□□□□□ -1.44
PHACTR4-203ENST00000463428 KRTAP9-9Q9BYP9 154 aa6.04□□□□□ -1.44
PHACTR4-203ENST00000463428 KRTAP9-4Q9BYQ2 154 aa6.04□□□□□ -1.44
PHACTR4-203ENST00000463428 CRCT1Q9UGL9 99 aa6.04□□□□□ -1.44
PHACTR4-203ENST00000463428 SSPOA2VEC9 5147 aa6.04□□□□□ -1.44
PHACTR4-203ENST00000463428 Q1T7F1 81 aa6.02□□□□□ -1.45
PHACTR4-203ENST00000463428 PRR15LQ9BU68 103 aa6.01□□□□□ -1.45
PHACTR4-203ENST00000463428 LINC01554Q52M75 96 aa5.99□□□□□ -1.45
PHACTR4-203ENST00000463428 V9GYY9 64 aa5.99□□□□□ -1.45
PHACTR4-203ENST00000463428 SPATA8Q6RVD6 105 aa5.99□□□□□ -1.45
PHACTR4-203ENST00000463428 KRTAP19-6Q3LI70 58 aa5.98□□□□□ -1.45
PHACTR4-203ENST00000463428 A6NN06 94 aa5.93□□□□□ -1.46
PHACTR4-203ENST00000463428 PLAC4Q8WY50 150 aa5.91□□□□□ -1.46
PHACTR4-203ENST00000463428 PSPHP1O15172 72 aa5.91□□□□□ -1.46
PHACTR4-203ENST00000463428 A0A0D9SG42 100 aa5.88□□□□□ -1.47
PHACTR4-203ENST00000463428 UQCR11O14957 56 aa5.87□□□□□ -1.47
PHACTR4-203ENST00000463428 KRTAP4-7Q9BYR0 210 aa5.87□□□□□ -1.47
PHACTR4-203ENST00000463428 KRTAP10-5P60370 271 aa5.86□□□□□ -1.47
PHACTR4-203ENST00000463428 FCGBPQ9Y6R7 5405 aaPredicted RBP5.85□□□□□ -1.47
PHACTR4-203ENST00000463428 A8MU10 97 aa5.85□□□□□ -1.47
PHACTR4-203ENST00000463428 KRTAP12-1P59990 96 aa5.82□□□□□ -1.48
PHACTR4-203ENST00000463428 MT1XP80297 61 aa5.82□□□□□ -1.48
PHACTR4-203ENST00000463428 LCE1DQ5T752 114 aa5.81□□□□□ -1.48
PHACTR4-203ENST00000463428 KRTAP12-2P59991 146 aa5.78□□□□□ -1.48
PHACTR4-203ENST00000463428 MIR22HGQ0VDD5 57 aa5.77□□□□□ -1.49
PHACTR4-203ENST00000463428 SPINT4Q6UDR6 99 aa5.76□□□□□ -1.49
PHACTR4-203ENST00000463428 PRO2289Q9P1D8 64 aa5.74□□□□□ -1.49
PHACTR4-203ENST00000463428 A6NED7 52 aa5.71□□□□□ -1.5
PHACTR4-203ENST00000463428 CAMK2N1Q7Z7J9 78 aa5.7□□□□□ -1.5
PHACTR4-203ENST00000463428 KRTAP4-9Q9BYQ8 210 aa5.65□□□□□ -1.5
PHACTR4-203ENST00000463428 KRTAP4-2Q9BYR5 136 aa5.59□□□□□ -1.51
PHACTR4-203ENST00000463428 CDC42SE1Q9NRR8 79 aa5.59□□□□□ -1.51
PHACTR4-203ENST00000463428 KRTAP10-7P60409 375 aaPredicted RBP5.56□□□□□ -1.52
PHACTR4-203ENST00000463428 MACF1Q9UPN3 7388 aaKnown RBP5.55□□□□□ -1.52
PHACTR4-203ENST00000463428 C10orf95Q9H7T3 257 aa5.54□□□□□ -1.52
PHACTR4-203ENST00000463428 K7ERS5 55 aa5.53□□□□□ -1.52
PHACTR4-203ENST00000463428 KRTAP10-12P60413 245 aa5.53□□□□□ -1.52
PHACTR4-203ENST00000463428 SYNE2Q8WXH0 6885 aaKnown RBP5.45□□□□□ -1.54
PHACTR4-203ENST00000463428 KMT2DO14686 5537 aa5.45□□□□□ -1.54
PHACTR4-203ENST00000463428 KRTAP9-7A8MTY7 169 aa5.4□□□□□ -1.54
PHACTR4-203ENST00000463428 KRTAP4-11Q9BYQ6 195 aa5.4□□□□□ -1.54
PHACTR4-203ENST00000463428 KRTAP6-3Q3LI67 103 aa5.4□□□□□ -1.55
PHACTR4-203ENST00000463428 TNP1P09430 55 aa5.39□□□□□ -1.55
PHACTR4-203ENST00000463428 BRK1Q8WUW1 75 aa5.39□□□□□ -1.55
PHACTR4-203ENST00000463428 KRTAP8-1Q8IUC2 63 aa5.35□□□□□ -1.55
PHACTR4-203ENST00000463428 KRTAP5-9P26371 169 aa5.33□□□□□ -1.56
PHACTR4-203ENST00000463428 KRTAP25-1Q3LHN0 102 aa5.31□□□□□ -1.56
PHACTR4-203ENST00000463428 ROMO1P60602 79 aa5.29□□□□□ -1.56
PHACTR4-203ENST00000463428 A0A0A0MQY5 61 aa5.28□□□□□ -1.56
PHACTR4-203ENST00000463428 LCE3AQ5TA76 89 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms