RNA–Protein interactions for RNA: ENST00000462983.5

TRAPPC12-214, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-214ENST00000462983 CYSTM1Q9H1C7 97 aa4.47□□□□□ -1.69
TRAPPC12-214ENST00000462983 CCDC179H3BU77 68 aa4.45□□□□□ -1.7
TRAPPC12-214ENST00000462983 S4R3F8 94 aa4.45□□□□□ -1.7
TRAPPC12-214ENST00000462983 A8MUN3 132 aa4.44□□□□□ -1.7
TRAPPC12-214ENST00000462983 H7BZZ5 65 aa4.44□□□□□ -1.7
TRAPPC12-214ENST00000462983 SPANXA2-OT1Q8N9U9 137 aa4.44□□□□□ -1.7
TRAPPC12-214ENST00000462983 DMAC1Q96GE9 116 aa4.44□□□□□ -1.7
TRAPPC12-214ENST00000462983 MT2AP02795 61 aa4.43□□□□□ -1.7
TRAPPC12-214ENST00000462983 NDUFC1O43677 76 aa4.42□□□□□ -1.7
TRAPPC12-214ENST00000462983 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.4□□□□□ -1.71
TRAPPC12-214ENST00000462983 MT1FP04733 61 aa4.4□□□□□ -1.71
TRAPPC12-214ENST00000462983 KRTAP10-10P60014 251 aa4.39□□□□□ -1.71
TRAPPC12-214ENST00000462983 CSAG1Q6PB30 78 aa4.39□□□□□ -1.71
TRAPPC12-214ENST00000462983 KRTAP3-3Q9BYR6 98 aa4.39□□□□□ -1.71
TRAPPC12-214ENST00000462983 LCA10Q71F78 164 aa4.37□□□□□ -1.71
TRAPPC12-214ENST00000462983 ACYP2P14621 99 aa4.34□□□□□ -1.71
TRAPPC12-214ENST00000462983 KRTAP9-3Q9BYQ3 159 aa4.32□□□□□ -1.72
TRAPPC12-214ENST00000462983 PCP4P48539 62 aa4.3□□□□□ -1.72
TRAPPC12-214ENST00000462983 USH2AO75445 5202 aa4.29□□□□□ -1.72
TRAPPC12-214ENST00000462983 LCE2BO14633 110 aa4.29□□□□□ -1.72
TRAPPC12-214ENST00000462983 ATP5EP56381 51 aaPredicted RBP4.29□□□□□ -1.72
TRAPPC12-214ENST00000462983 TMEM258P61165 79 aa4.29□□□□□ -1.72
TRAPPC12-214ENST00000462983 SVIPQ8NHG7 77 aa4.29□□□□□ -1.72
TRAPPC12-214ENST00000462983 COA5Q86WW8 74 aa4.27□□□□□ -1.73
TRAPPC12-214ENST00000462983 CHKB-CPT1BH3BT56 60 aa4.26□□□□□ -1.73
TRAPPC12-214ENST00000462983 SPTSSBQ8NFR3 76 aa4.26□□□□□ -1.73
TRAPPC12-214ENST00000462983 H0YAA0 97 aa4.25□□□□□ -1.73
TRAPPC12-214ENST00000462983 SSPOA2VEC9 5147 aa4.24□□□□□ -1.73
TRAPPC12-214ENST00000462983 ADM2Q7Z4H4 148 aa4.19□□□□□ -1.74
TRAPPC12-214ENST00000462983 KRTAP3-2Q9BYR7 98 aa4.18□□□□□ -1.74
TRAPPC12-214ENST00000462983 CRIPTQ9P021 101 aa4.18□□□□□ -1.74
TRAPPC12-214ENST00000462983 KRTAP19-1Q8IUB9 90 aa4.17□□□□□ -1.74
TRAPPC12-214ENST00000462983 SERP1Q9Y6X1 66 aa4.15□□□□□ -1.75
TRAPPC12-214ENST00000462983 P0C880 135 aa4.13□□□□□ -1.75
TRAPPC12-214ENST00000462983 FCGBPQ9Y6R7 5405 aaPredicted RBP4.13□□□□□ -1.75
TRAPPC12-214ENST00000462983 KRTAP19-6Q3LI70 58 aa4.1□□□□□ -1.75
TRAPPC12-214ENST00000462983 Q5VV11 94 aa4.1□□□□□ -1.75
TRAPPC12-214ENST00000462983 SPRR2GQ9BYE4 73 aa4.1□□□□□ -1.75
TRAPPC12-214ENST00000462983 R4GN34 69 aa4.1□□□□□ -1.75
TRAPPC12-214ENST00000462983 SEC61GP60059 68 aa4.07□□□□□ -1.76
TRAPPC12-214ENST00000462983 RPS28P62857 69 aaKnown RBP4.07□□□□□ -1.76
TRAPPC12-214ENST00000462983 LINC01558Q9Y6Z2 57 aa4.07□□□□□ -1.76
TRAPPC12-214ENST00000462983 M0QZ58 72 aa4.06□□□□□ -1.76
TRAPPC12-214ENST00000462983 MT1BP07438 61 aa4.06□□□□□ -1.76
TRAPPC12-214ENST00000462983 KRTAP19-8Q3LI54 63 aa4.05□□□□□ -1.76
TRAPPC12-214ENST00000462983 SMIM26A0A096LP01 95 aa4.01□□□□□ -1.77
TRAPPC12-214ENST00000462983 A0A1B0GU69 56 aa4.01□□□□□ -1.77
TRAPPC12-214ENST00000462983 KRTAP13-4Q3LI77 160 aa4.01□□□□□ -1.77
TRAPPC12-214ENST00000462983 LINC01554Q52M75 96 aa4.01□□□□□ -1.77
TRAPPC12-214ENST00000462983 PLAC4Q8WY50 150 aa4.01□□□□□ -1.77
TRAPPC12-214ENST00000462983 Q1T7F1 81 aa4□□□□□ -1.77
TRAPPC12-214ENST00000462983 SYNE2Q8WXH0 6885 aaKnown RBP3.99□□□□□ -1.77
TRAPPC12-214ENST00000462983 A6NN06 94 aa3.98□□□□□ -1.77
TRAPPC12-214ENST00000462983 MACF1Q9UPN3 7388 aaKnown RBP3.97□□□□□ -1.77
TRAPPC12-214ENST00000462983 A0A1B0GU33 70 aa3.96□□□□□ -1.78
TRAPPC12-214ENST00000462983 V9GYY9 64 aa3.96□□□□□ -1.78
TRAPPC12-214ENST00000462983 KRTAP6-3Q3LI67 103 aa3.95□□□□□ -1.78
TRAPPC12-214ENST00000462983 PRR15LQ9BU68 103 aa3.95□□□□□ -1.78
TRAPPC12-214ENST00000462983 KRTAP10-5P60370 271 aa3.93□□□□□ -1.78
TRAPPC12-214ENST00000462983 PRO2289Q9P1D8 64 aa3.92□□□□□ -1.78
TRAPPC12-214ENST00000462983 SPATA8Q6RVD6 105 aa3.91□□□□□ -1.78
TRAPPC12-214ENST00000462983 KRTAP20-1Q3LI63 56 aa3.9□□□□□ -1.79
TRAPPC12-214ENST00000462983 PSPHP1O15172 72 aa3.88□□□□□ -1.79
TRAPPC12-214ENST00000462983 UQCR11O14957 56 aa3.86□□□□□ -1.79
TRAPPC12-214ENST00000462983 A0A0D9SG42 100 aa3.85□□□□□ -1.79
TRAPPC12-214ENST00000462983 A8MU10 97 aa3.83□□□□□ -1.8
TRAPPC12-214ENST00000462983 KRTAP12-1P59990 96 aa3.83□□□□□ -1.8
TRAPPC12-214ENST00000462983 MT1XP80297 61 aa3.83□□□□□ -1.8
TRAPPC12-214ENST00000462983 CAMK2N1Q7Z7J9 78 aa3.82□□□□□ -1.8
TRAPPC12-214ENST00000462983 SPINT4Q6UDR6 99 aa3.81□□□□□ -1.8
TRAPPC12-214ENST00000462983 MIR22HGQ0VDD5 57 aa3.8□□□□□ -1.8
TRAPPC12-214ENST00000462983 NEBP20929 6669 aa3.8□□□□□ -1.8
TRAPPC12-214ENST00000462983 KRTAP12-2P59991 146 aa3.79□□□□□ -1.8
TRAPPC12-214ENST00000462983 MUC12Q9UKN1 5478 aa3.76□□□□□ -1.81
TRAPPC12-214ENST00000462983 A6NED7 52 aa3.75□□□□□ -1.81
TRAPPC12-214ENST00000462983 CDC42SE1Q9NRR8 79 aa3.72□□□□□ -1.81
TRAPPC12-214ENST00000462983 KMT2DO14686 5537 aa3.71□□□□□ -1.82
TRAPPC12-214ENST00000462983 KRTAP5-9P26371 169 aa3.69□□□□□ -1.82
TRAPPC12-214ENST00000462983 KRTAP2-3P0C7H8 128 aa3.67□□□□□ -1.82
TRAPPC12-214ENST00000462983 KRTAP10-7P60409 375 aaPredicted RBP3.67□□□□□ -1.82
TRAPPC12-214ENST00000462983 KRTAP2-4Q9BYR9 128 aa3.67□□□□□ -1.82
TRAPPC12-214ENST00000462983 K7ERS5 55 aa3.66□□□□□ -1.82
TRAPPC12-214ENST00000462983 KRTAP8-1Q8IUC2 63 aa3.66□□□□□ -1.82
TRAPPC12-214ENST00000462983 KRTAP4-8A0A0G2JLE6 195 aa3.65□□□□□ -1.83
TRAPPC12-214ENST00000462983 KRTAP4-8Q9BYQ9 185 aa3.65□□□□□ -1.83
TRAPPC12-214ENST00000462983 SPRR2FQ96RM1 72 aa3.64□□□□□ -1.83
TRAPPC12-214ENST00000462983 C10orf95Q9H7T3 257 aa3.64□□□□□ -1.83
TRAPPC12-214ENST00000462983 KRTAP10-12P60413 245 aa3.63□□□□□ -1.83
TRAPPC12-214ENST00000462983 MDN1Q9NU22 5596 aa3.59□□□□□ -1.84
TRAPPC12-214ENST00000462983 SPRR2EP22531 72 aa3.57□□□□□ -1.84
TRAPPC12-214ENST00000462983 SPRR2BP35325 72 aa3.57□□□□□ -1.84
TRAPPC12-214ENST00000462983 SPRR2AP35326 72 aa3.57□□□□□ -1.84
TRAPPC12-214ENST00000462983 TNP1P09430 55 aa3.56□□□□□ -1.84
TRAPPC12-214ENST00000462983 BRK1Q8WUW1 75 aa3.56□□□□□ -1.84
TRAPPC12-214ENST00000462983 KRTAP2-2Q9BYT5 123 aa3.53□□□□□ -1.84
TRAPPC12-214ENST00000462983 KRTAP2-1Q9BYU5 128 aa3.53□□□□□ -1.84
TRAPPC12-214ENST00000462983 LCE1AQ5T7P2 110 aa3.51□□□□□ -1.85
TRAPPC12-214ENST00000462983 KRTAP25-1Q3LHN0 102 aa3.49□□□□□ -1.85
TRAPPC12-214ENST00000462983 ROMO1P60602 79 aa3.48□□□□□ -1.85
TRAPPC12-214ENST00000462983 GPR98Q8WXG9 6306 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms