RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 SMIM20Q8N5G0 67 aa4.6□□□□□ -1.67
PKP4-208ENST00000462335 FAM236AA0A1B0GUQ0 79 aa4.59□□□□□ -1.67
PKP4-208ENST00000462335 FAM236BA0A1B0GV22 79 aa4.59□□□□□ -1.67
PKP4-208ENST00000462335 MT2AP02795 61 aa4.58□□□□□ -1.68
PKP4-208ENST00000462335 FSIP2Q5CZC0 6907 aa4.57□□□□□ -1.68
PKP4-208ENST00000462335 KRTAP19-1Q8IUB9 90 aa4.57□□□□□ -1.68
PKP4-208ENST00000462335 A8MUN3 132 aa4.56□□□□□ -1.68
PKP4-208ENST00000462335 NDUFC1O43677 76 aa4.56□□□□□ -1.68
PKP4-208ENST00000462335 KRTAP3-1Q9BYR8 98 aa4.56□□□□□ -1.68
PKP4-208ENST00000462335 LCA10Q71F78 164 aa4.55□□□□□ -1.68
PKP4-208ENST00000462335 KRTAP9-9Q9BYP9 154 aa4.55□□□□□ -1.68
PKP4-208ENST00000462335 KRTAP9-4Q9BYQ2 154 aa4.55□□□□□ -1.68
PKP4-208ENST00000462335 TRAV7A0A075B6U4 112 aa4.54□□□□□ -1.68
PKP4-208ENST00000462335 MT1FP04733 61 aa4.54□□□□□ -1.68
PKP4-208ENST00000462335 KLKP1Q107X0 134 aa4.54□□□□□ -1.68
PKP4-208ENST00000462335 CRCT1Q9UGL9 99 aa4.54□□□□□ -1.68
PKP4-208ENST00000462335 KRTAP9-3Q9BYQ3 159 aa4.46□□□□□ -1.7
PKP4-208ENST00000462335 KRTAP4-8A0A0G2JLE6 195 aa4.45□□□□□ -1.7
PKP4-208ENST00000462335 ACYP2P14621 99 aa4.45□□□□□ -1.7
PKP4-208ENST00000462335 SERP2Q8N6R1 65 aa4.44□□□□□ -1.7
PKP4-208ENST00000462335 SPTSSBQ8NFR3 76 aa4.43□□□□□ -1.7
PKP4-208ENST00000462335 SNURFQ9Y675 71 aa4.43□□□□□ -1.7
PKP4-208ENST00000462335 CHKB-CPT1BH3BT56 60 aa4.42□□□□□ -1.7
PKP4-208ENST00000462335 C20orf197Q8N268 126 aa4.42□□□□□ -1.7
PKP4-208ENST00000462335 DMAC1Q96GE9 116 aa4.42□□□□□ -1.7
PKP4-208ENST00000462335 ADM2Q7Z4H4 148 aa4.39□□□□□ -1.71
PKP4-208ENST00000462335 PCP4P48539 62 aa4.38□□□□□ -1.71
PKP4-208ENST00000462335 CRIPTQ9P021 101 aa4.38□□□□□ -1.71
PKP4-208ENST00000462335 H0YAA0 97 aa4.35□□□□□ -1.71
PKP4-208ENST00000462335 Q5VV11 94 aa4.34□□□□□ -1.71
PKP4-208ENST00000462335 COX7CP15954 63 aa4.33□□□□□ -1.72
PKP4-208ENST00000462335 LCE1DQ5T752 114 aa4.33□□□□□ -1.72
PKP4-208ENST00000462335 SPANXA2-OT1Q8N9U9 137 aa4.33□□□□□ -1.72
PKP4-208ENST00000462335 USH2AO75445 5202 aa4.33□□□□□ -1.72
PKP4-208ENST00000462335 KRTAP23-1A1A580 65 aa4.31□□□□□ -1.72
PKP4-208ENST00000462335 ANAPC13Q9BS18 74 aa4.31□□□□□ -1.72
PKP4-208ENST00000462335 SPRR2GQ9BYE4 73 aa4.3□□□□□ -1.72
PKP4-208ENST00000462335 R4GN34 69 aa4.3□□□□□ -1.72
PKP4-208ENST00000462335 KRTAP4-7Q9BYR0 210 aa4.29□□□□□ -1.72
PKP4-208ENST00000462335 M0QZ58 72 aa4.25□□□□□ -1.73
PKP4-208ENST00000462335 KRTAP19-6Q3LI70 58 aa4.25□□□□□ -1.73
PKP4-208ENST00000462335 SEC61GP60059 68 aa4.24□□□□□ -1.73
PKP4-208ENST00000462335 PLAC4Q8WY50 150 aa4.24□□□□□ -1.73
PKP4-208ENST00000462335 SSPOA2VEC9 5147 aa4.24□□□□□ -1.73
PKP4-208ENST00000462335 A6NN06 94 aa4.23□□□□□ -1.73
PKP4-208ENST00000462335 P0C880 135 aa4.23□□□□□ -1.73
PKP4-208ENST00000462335 LINC01554Q52M75 96 aa4.23□□□□□ -1.73
PKP4-208ENST00000462335 KRTAP9-7A8MTY7 169 aa4.22□□□□□ -1.73
PKP4-208ENST00000462335 KRTAP19-8Q3LI54 63 aa4.22□□□□□ -1.73
PKP4-208ENST00000462335 COA5Q86WW8 74 aa4.22□□□□□ -1.73
PKP4-208ENST00000462335 LCE4AQ5TA78 99 aa4.21□□□□□ -1.74
PKP4-208ENST00000462335 SERP1Q9Y6X1 66 aa4.2□□□□□ -1.74
PKP4-208ENST00000462335 KRTAP4-9Q9BYQ8 210 aa4.19□□□□□ -1.74
PKP4-208ENST00000462335 H7BZZ5 65 aa4.18□□□□□ -1.74
PKP4-208ENST00000462335 MT1BP07438 61 aa4.18□□□□□ -1.74
PKP4-208ENST00000462335 FCGBPQ9Y6R7 5405 aaPredicted RBP4.17□□□□□ -1.74
PKP4-208ENST00000462335 KRTAP19-4Q3LI73 84 aa4.16□□□□□ -1.74
PKP4-208ENST00000462335 PRO2289Q9P1D8 64 aa4.15□□□□□ -1.75
PKP4-208ENST00000462335 CCDC179H3BU77 68 aa4.14□□□□□ -1.75
PKP4-208ENST00000462335 CYSTM1Q9H1C7 97 aa4.13□□□□□ -1.75
PKP4-208ENST00000462335 ATP5EP56381 51 aaPredicted RBP4.12□□□□□ -1.75
PKP4-208ENST00000462335 KRTAP4-2Q9BYR5 136 aa4.12□□□□□ -1.75
PKP4-208ENST00000462335 KRTAP10-5P60370 271 aa4.1□□□□□ -1.75
PKP4-208ENST00000462335 MACF1Q9UPN3 7388 aaKnown RBP4.09□□□□□ -1.75
PKP4-208ENST00000462335 A0A1B0GU69 56 aa4.07□□□□□ -1.76
PKP4-208ENST00000462335 A0A0A0MQY5 61 aa4.05□□□□□ -1.76
PKP4-208ENST00000462335 A0A1B0GU33 70 aa4.05□□□□□ -1.76
PKP4-208ENST00000462335 PRR15LQ9BU68 103 aa4.05□□□□□ -1.76
PKP4-208ENST00000462335 TMEM258P61165 79 aa4.04□□□□□ -1.76
PKP4-208ENST00000462335 KRTAP4-11Q9BYQ6 195 aa4.04□□□□□ -1.76
PKP4-208ENST00000462335 SYNE2Q8WXH0 6885 aaKnown RBP4.04□□□□□ -1.76
PKP4-208ENST00000462335 CAMK2N1Q7Z7J9 78 aa4.02□□□□□ -1.77
PKP4-208ENST00000462335 A0A0D9SG42 100 aa4.01□□□□□ -1.77
PKP4-208ENST00000462335 SMIM26A0A096LP01 95 aa3.98□□□□□ -1.77
PKP4-208ENST00000462335 MT1XP80297 61 aa3.97□□□□□ -1.77
PKP4-208ENST00000462335 KRTAP6-3Q3LI67 103 aa3.97□□□□□ -1.77
PKP4-208ENST00000462335 LCE5AQ5TCM9 118 aa3.97□□□□□ -1.77
PKP4-208ENST00000462335 SPATA8Q6RVD6 105 aa3.97□□□□□ -1.77
PKP4-208ENST00000462335 SPINT4Q6UDR6 99 aa3.97□□□□□ -1.77
PKP4-208ENST00000462335 KRTAP13-4Q3LI77 160 aa3.96□□□□□ -1.78
PKP4-208ENST00000462335 LINC01558Q9Y6Z2 57 aa3.91□□□□□ -1.78
PKP4-208ENST00000462335 KRTAP12-2P59991 146 aa3.87□□□□□ -1.79
PKP4-208ENST00000462335 KRTAP8-1Q8IUC2 63 aa3.87□□□□□ -1.79
PKP4-208ENST00000462335 V9GYY9 64 aa3.87□□□□□ -1.79
PKP4-208ENST00000462335 UQCR11O14957 56 aa3.86□□□□□ -1.79
PKP4-208ENST00000462335 A8MU10 97 aa3.84□□□□□ -1.79
PKP4-208ENST00000462335 KRTAP12-1P59990 96 aa3.83□□□□□ -1.8
PKP4-208ENST00000462335 SPRR2FQ96RM1 72 aa3.82□□□□□ -1.8
PKP4-208ENST00000462335 KRTAP10-7P60409 375 aaPredicted RBP3.81□□□□□ -1.8
PKP4-208ENST00000462335 K7ERS5 55 aa3.8□□□□□ -1.8
PKP4-208ENST00000462335 KRTAP5-9P26371 169 aa3.79□□□□□ -1.8
PKP4-208ENST00000462335 PSPHP1O15172 72 aa3.78□□□□□ -1.8
PKP4-208ENST00000462335 KRTAP10-12P60413 245 aa3.78□□□□□ -1.8
PKP4-208ENST00000462335 MIR22HGQ0VDD5 57 aa3.78□□□□□ -1.8
PKP4-208ENST00000462335 KMT2DO14686 5537 aa3.77□□□□□ -1.81
PKP4-208ENST00000462335 Q1T7F1 81 aa3.76□□□□□ -1.81
PKP4-208ENST00000462335 NEBP20929 6669 aa3.75□□□□□ -1.81
PKP4-208ENST00000462335 SPRR2EP22531 72 aa3.74□□□□□ -1.81
PKP4-208ENST00000462335 SPRR2BP35325 72 aa3.74□□□□□ -1.81
PKP4-208ENST00000462335 SPRR2AP35326 72 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms