RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 MIR22HGQ0VDD5 57 aa6.77□□□□□ -1.33
COL4A6-204ENST00000461897 DMBT1Q9UGM3 2413 aaPredicted RBP6.74□□□□□ -1.33
COL4A6-204ENST00000461897 C9orf92A6NGG3 77 aa6.73□□□□□ -1.33
COL4A6-204ENST00000461897 A8MUU9 505 aa6.73□□□□□ -1.33
COL4A6-204ENST00000461897 C20orf166-AS1Q96NR2 134 aa6.73□□□□□ -1.33
COL4A6-204ENST00000461897 KRTAP3-1Q9BYR8 98 aa6.62□□□□□ -1.35
COL4A6-204ENST00000461897 PRAC1Q96KF2 57 aa6.61□□□□□ -1.35
COL4A6-204ENST00000461897 PCLOQ9Y6V0 5065 aa6.6□□□□□ -1.35
COL4A6-204ENST00000461897 ADM2Q7Z4H4 148 aa6.59□□□□□ -1.35
COL4A6-204ENST00000461897 XP32Q5T750 250 aa6.56□□□□□ -1.36
COL4A6-204ENST00000461897 H0YAA0 97 aa6.55□□□□□ -1.36
COL4A6-204ENST00000461897 LPAP08519 4548 aa6.54□□□□□ -1.36
COL4A6-204ENST00000461897 KRTAP3-3Q9BYR6 98 aa6.54□□□□□ -1.36
COL4A6-204ENST00000461897 KRTAP3-2Q9BYR7 98 aa6.54□□□□□ -1.36
COL4A6-204ENST00000461897 LRP2P98164 4655 aa6.52□□□□□ -1.37
COL4A6-204ENST00000461897 RPL37P61927 97 aaKnown RBP6.51□□□□□ -1.37
COL4A6-204ENST00000461897 COX6B2Q6YFQ2 88 aa6.51□□□□□ -1.37
COL4A6-204ENST00000461897 J3QL48 77 aa6.51□□□□□ -1.37
COL4A6-204ENST00000461897 A0A1B0GU33 70 aa6.5□□□□□ -1.37
COL4A6-204ENST00000461897 H1FX-AS1Q4G0G2 97 aa6.5□□□□□ -1.37
COL4A6-204ENST00000461897 TPRXLQ17RH7 258 aa6.49□□□□□ -1.37
COL4A6-204ENST00000461897 LINC01554Q52M75 96 aa6.49□□□□□ -1.37
COL4A6-204ENST00000461897 CSAG1Q6PB30 78 aa6.44□□□□□ -1.38
COL4A6-204ENST00000461897 HERC1Q15751 4861 aa6.44□□□□□ -1.38
COL4A6-204ENST00000461897 HMCN2Q8NDA2 5059 aa6.38□□□□□ -1.39
COL4A6-204ENST00000461897 K7ERS5 55 aa6.33□□□□□ -1.4
COL4A6-204ENST00000461897 KRTAP10-6P60371 365 aaPredicted RBP6.32□□□□□ -1.4
COL4A6-204ENST00000461897 KRTAP25-1Q3LHN0 102 aa6.32□□□□□ -1.4
COL4A6-204ENST00000461897 MUC17Q685J3 4493 aa6.29□□□□□ -1.4
COL4A6-204ENST00000461897 SEC61BP60468 96 aaKnown RBP6.24□□□□□ -1.41
COL4A6-204ENST00000461897 S4R3F8 94 aa6.24□□□□□ -1.41
COL4A6-204ENST00000461897 KRTAP13-4Q3LI77 160 aa6.22□□□□□ -1.41
COL4A6-204ENST00000461897 ROMO1P60602 79 aa6.19□□□□□ -1.42
COL4A6-204ENST00000461897 KRTAP4-1Q9BYQ7 146 aa6.18□□□□□ -1.42
COL4A6-204ENST00000461897 MUC2Q02817 5179 aa6.16□□□□□ -1.42
COL4A6-204ENST00000461897 P0C880 135 aa6.12□□□□□ -1.43
COL4A6-204ENST00000461897 A0A0D9SG42 100 aa6.09□□□□□ -1.43
COL4A6-204ENST00000461897 UBR4Q5T4S7 5183 aa6.08□□□□□ -1.44
COL4A6-204ENST00000461897 RNF213Q63HN8 5207 aa6.06□□□□□ -1.44
COL4A6-204ENST00000461897 CRIPTQ9P021 101 aa6.05□□□□□ -1.44
COL4A6-204ENST00000461897 KRTAP19-2Q3LHN2 52 aa6.04□□□□□ -1.44
COL4A6-204ENST00000461897 M0QZ58 72 aa6.01□□□□□ -1.45
COL4A6-204ENST00000461897 KRTAP12-2P59991 146 aa6.01□□□□□ -1.45
COL4A6-204ENST00000461897 KRTAP12-1P59990 96 aa6□□□□□ -1.45
COL4A6-204ENST00000461897 FLGP20930 4061 aaPredicted RBP5.96□□□□□ -1.46
COL4A6-204ENST00000461897 H3BS24 57 aa5.92□□□□□ -1.46
COL4A6-204ENST00000461897 FAT4Q6V0I7 4981 aa5.92□□□□□ -1.46
COL4A6-204ENST00000461897 SPINT4Q6UDR6 99 aa5.89□□□□□ -1.47
COL4A6-204ENST00000461897 C10orf95Q9H7T3 257 aa5.89□□□□□ -1.47
COL4A6-204ENST00000461897 LOC100996750A0A140TA64 210 aa5.87□□□□□ -1.47
COL4A6-204ENST00000461897 KRTAP4-6Q9BYQ5 205 aa5.87□□□□□ -1.47
COL4A6-204ENST00000461897 LCE2CQ5TA81 110 aa5.85□□□□□ -1.47
COL4A6-204ENST00000461897 KRTAP15-1Q3LI76 137 aa5.79□□□□□ -1.48
COL4A6-204ENST00000461897 R4GN34 69 aa5.77□□□□□ -1.49
COL4A6-204ENST00000461897 MT1HP80294 61 aa5.72□□□□□ -1.49
COL4A6-204ENST00000461897 LORP23490 312 aaPredicted RBP5.68□□□□□ -1.5
COL4A6-204ENST00000461897 LCE2BO14633 110 aa5.66□□□□□ -1.5
COL4A6-204ENST00000461897 M0R2T5 61 aa5.63□□□□□ -1.51
COL4A6-204ENST00000461897 NDUFAF8A1L188 74 aa5.57□□□□□ -1.52
COL4A6-204ENST00000461897 PP632Q6XCG6 107 aa5.53□□□□□ -1.52
COL4A6-204ENST00000461897 KRTAP9-8Q9BYQ0 159 aa5.52□□□□□ -1.53
COL4A6-204ENST00000461897 MT2AP02795 61 aa5.51□□□□□ -1.53
COL4A6-204ENST00000461897 MT1FP04733 61 aa5.49□□□□□ -1.53
COL4A6-204ENST00000461897 PLAC4Q8WY50 150 aa5.48□□□□□ -1.53
COL4A6-204ENST00000461897 CAMK2N1Q7Z7J9 78 aa5.46□□□□□ -1.54
COL4A6-204ENST00000461897 KRTAP10-10P60014 251 aa5.44□□□□□ -1.54
COL4A6-204ENST00000461897 LCE2AQ5TA79 106 aaPredicted RBP5.44□□□□□ -1.54
COL4A6-204ENST00000461897 KRTAP19-1Q8IUB9 90 aa5.43□□□□□ -1.54
COL4A6-204ENST00000461897 SPRR2GQ9BYE4 73 aa5.43□□□□□ -1.54
COL4A6-204ENST00000461897 KRTAP23-1A1A580 65 aa5.41□□□□□ -1.54
COL4A6-204ENST00000461897 TNP1P09430 55 aa5.32□□□□□ -1.56
COL4A6-204ENST00000461897 KRTAP9-3Q9BYQ3 159 aa5.31□□□□□ -1.56
COL4A6-204ENST00000461897 LUZP6Q538Z0 58 aa5.28□□□□□ -1.56
COL4A6-204ENST00000461897 KRTAP19-8Q3LI54 63 aa5.27□□□□□ -1.57
COL4A6-204ENST00000461897 MT1BP07438 61 aa5.22□□□□□ -1.57
COL4A6-204ENST00000461897 SPRR5A0A1B0GTR4 108 aa5.21□□□□□ -1.58
COL4A6-204ENST00000461897 KRTAP4-8Q9BYQ9 185 aa5.17□□□□□ -1.58
COL4A6-204ENST00000461897 USH2AO75445 5202 aa5.14□□□□□ -1.59
COL4A6-204ENST00000461897 A0A0A0MQY5 61 aa5.09□□□□□ -1.59
COL4A6-204ENST00000461897 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.09□□□□□ -1.6
COL4A6-204ENST00000461897 MT1XP80297 61 aa5.07□□□□□ -1.6
COL4A6-204ENST00000461897 KRTAP9-2Q9BYQ4 174 aa5.07□□□□□ -1.6
COL4A6-204ENST00000461897 KRTAP10-5P60370 271 aa5.06□□□□□ -1.6
COL4A6-204ENST00000461897 KRTAP9-6A0A140TA67 174 aa5.05□□□□□ -1.6
COL4A6-204ENST00000461897 LCE3AQ5TA76 89 aa5.01□□□□□ -1.61
COL4A6-204ENST00000461897 KRTAP8-1Q8IUC2 63 aa4.98□□□□□ -1.61
COL4A6-204ENST00000461897 SSPOA2VEC9 5147 aa4.97□□□□□ -1.61
COL4A6-204ENST00000461897 PRO2289Q9P1D8 64 aa4.94□□□□□ -1.62
COL4A6-204ENST00000461897 FSIP2Q5CZC0 6907 aa4.9□□□□□ -1.62
COL4A6-204ENST00000461897 LCE3BQ5TA77 95 aa4.9□□□□□ -1.63
COL4A6-204ENST00000461897 KRTAP10-7P60409 375 aaPredicted RBP4.88□□□□□ -1.63
COL4A6-204ENST00000461897 KRTAP4-8A0A0G2JLE6 195 aa4.86□□□□□ -1.63
COL4A6-204ENST00000461897 KRTAP10-12P60413 245 aa4.81□□□□□ -1.64
COL4A6-204ENST00000461897 KRTAP9-9Q9BYP9 154 aa4.81□□□□□ -1.64
COL4A6-204ENST00000461897 KRTAP9-4Q9BYQ2 154 aa4.81□□□□□ -1.64
COL4A6-204ENST00000461897 KRTAP19-6Q3LI70 58 aa4.81□□□□□ -1.64
COL4A6-204ENST00000461897 KMT2DO14686 5537 aa4.8□□□□□ -1.64
COL4A6-204ENST00000461897 KRTAP12-3P60328 96 aa4.79□□□□□ -1.64
COL4A6-204ENST00000461897 KRTAP4-12Q9BQ66 201 aa4.73□□□□□ -1.65
COL4A6-204ENST00000461897 KRTAP4-7Q9BYR0 210 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms