RNA–Protein interactions for RNA: ENST00000461111.1

AGRN-203, Transcript of agrin, humanhuman

TSL 1 (best)

Gene AGRN, Length 3,385 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-203ENST00000461111 MYCBP2O75592 4640 aa6.52□□□□□ -1.37
AGRN-203ENST00000461111 KRTAP10-6P60371 365 aaPredicted RBP6.47□□□□□ -1.37
AGRN-203ENST00000461111 J3QL48 77 aa6.46□□□□□ -1.37
AGRN-203ENST00000461111 KRTAP15-1Q3LI76 137 aa6.46□□□□□ -1.38
AGRN-203ENST00000461111 A0A0A0MQY5 61 aa6.44□□□□□ -1.38
AGRN-203ENST00000461111 S4R3F8 94 aa6.43□□□□□ -1.38
AGRN-203ENST00000461111 KRTAP12-2P59991 146 aa6.4□□□□□ -1.38
AGRN-203ENST00000461111 KRTAP3-2Q9BYR7 98 aa6.37□□□□□ -1.39
AGRN-203ENST00000461111 KRTAP3-3Q9BYR6 98 aa6.37□□□□□ -1.39
AGRN-203ENST00000461111 SACSQ9NZJ4 4579 aa6.35□□□□□ -1.39
AGRN-203ENST00000461111 LRP1Q07954 4544 aaKnown RBP6.34□□□□□ -1.39
AGRN-203ENST00000461111 RPS29P62273 56 aaKnown RBP6.34□□□□□ -1.39
AGRN-203ENST00000461111 PKD1P98161 4303 aa6.34□□□□□ -1.39
AGRN-203ENST00000461111 DYNC1H1Q14204 4646 aaKnown RBP6.33□□□□□ -1.4
AGRN-203ENST00000461111 KRTAP10-8P60410 259 aa6.33□□□□□ -1.4
AGRN-203ENST00000461111 RYR3Q15413 4870 aa6.31□□□□□ -1.4
AGRN-203ENST00000461111 FAT3Q8TDW7 4589 aa6.3□□□□□ -1.4
AGRN-203ENST00000461111 KRTAP12-1P59990 96 aa6.26□□□□□ -1.41
AGRN-203ENST00000461111 Q5VSD8 79 aa6.26□□□□□ -1.41
AGRN-203ENST00000461111 APOBP04114 4563 aaKnown RBP6.22□□□□□ -1.41
AGRN-203ENST00000461111 XP32Q5T750 250 aa6.21□□□□□ -1.41
AGRN-203ENST00000461111 HSPG2P98160 4391 aa6.21□□□□□ -1.42
AGRN-203ENST00000461111 KIAA1109Q2LD37 5005 aa6.2□□□□□ -1.42
AGRN-203ENST00000461111 LUZP6Q538Z0 58 aa6.19□□□□□ -1.42
AGRN-203ENST00000461111 RYR2Q92736 4967 aa6.18□□□□□ -1.42
AGRN-203ENST00000461111 EPPK1P58107 5090 aaKnown RBP6.16□□□□□ -1.42
AGRN-203ENST00000461111 KRTAP10-4P60372 401 aaPredicted RBP6.15□□□□□ -1.42
AGRN-203ENST00000461111 M0QZ58 72 aa6.15□□□□□ -1.43
AGRN-203ENST00000461111 LPAP08519 4548 aa6.12□□□□□ -1.43
AGRN-203ENST00000461111 A0A1B0GVY2 172 aa6.12□□□□□ -1.43
AGRN-203ENST00000461111 PLAC4Q8WY50 150 aa6.11□□□□□ -1.43
AGRN-203ENST00000461111 R4GN34 69 aa6.11□□□□□ -1.43
AGRN-203ENST00000461111 LRP2P98164 4655 aa6.04□□□□□ -1.44
AGRN-203ENST00000461111 RYR1P21817 5038 aa6.03□□□□□ -1.44
AGRN-203ENST00000461111 PKHD1L1Q86WI1 4243 aa6.02□□□□□ -1.45
AGRN-203ENST00000461111 LCE2DQ5TA82 110 aaPredicted RBP5.98□□□□□ -1.45
AGRN-203ENST00000461111 CAMK2N1Q7Z7J9 78 aa5.95□□□□□ -1.46
AGRN-203ENST00000461111 KRTAP17-1Q9BYP8 105 aa5.95□□□□□ -1.46
AGRN-203ENST00000461111 ABCA13Q86UQ4 5058 aa5.91□□□□□ -1.46
AGRN-203ENST00000461111 KRTAP4-5Q9BYR2 181 aa5.9□□□□□ -1.46
AGRN-203ENST00000461111 MUC2Q02817 5179 aa5.87□□□□□ -1.47
AGRN-203ENST00000461111 LORP23490 312 aaPredicted RBP5.85□□□□□ -1.47
AGRN-203ENST00000461111 MT1HL1P0DM35 61 aa5.84□□□□□ -1.47
AGRN-203ENST00000461111 TNXBP22105 4242 aa5.83□□□□□ -1.48
AGRN-203ENST00000461111 HERC2O95714 4834 aa5.79□□□□□ -1.48
AGRN-203ENST00000461111 SEC61BP60468 96 aaKnown RBP5.74□□□□□ -1.49
AGRN-203ENST00000461111 HERC1Q15751 4861 aa5.73□□□□□ -1.49
AGRN-203ENST00000461111 PCLOQ9Y6V0 5065 aa5.68□□□□□ -1.5
AGRN-203ENST00000461111 PP632Q6XCG6 107 aa5.66□□□□□ -1.5
AGRN-203ENST00000461111 BIRC6Q9NR09 4857 aa5.6□□□□□ -1.51
AGRN-203ENST00000461111 KRTAP4-1Q9BYQ7 146 aa5.6□□□□□ -1.51
AGRN-203ENST00000461111 RNF213Q63HN8 5207 aa5.57□□□□□ -1.52
AGRN-203ENST00000461111 FAT4Q6V0I7 4981 aa5.56□□□□□ -1.52
AGRN-203ENST00000461111 M0R2T5 61 aa5.55□□□□□ -1.52
AGRN-203ENST00000461111 TNP1P09430 55 aa5.53□□□□□ -1.52
AGRN-203ENST00000461111 UBR4Q5T4S7 5183 aa5.49□□□□□ -1.53
AGRN-203ENST00000461111 LCE2BO14633 110 aa5.33□□□□□ -1.56
AGRN-203ENST00000461111 LCE2CQ5TA81 110 aa5.33□□□□□ -1.56
AGRN-203ENST00000461111 SPRR5A0A1B0GTR4 108 aa5.32□□□□□ -1.56
AGRN-203ENST00000461111 MUC17Q685J3 4493 aa5.31□□□□□ -1.56
AGRN-203ENST00000461111 PRO2289Q9P1D8 64 aa5.28□□□□□ -1.56
AGRN-203ENST00000461111 KRTAP10-10P60014 251 aa5.24□□□□□ -1.57
AGRN-203ENST00000461111 HMCN2Q8NDA2 5059 aa5.24□□□□□ -1.57
AGRN-203ENST00000461111 LCE2AQ5TA79 106 aaPredicted RBP5.24□□□□□ -1.57
AGRN-203ENST00000461111 LCE3AQ5TA76 89 aa5.21□□□□□ -1.58
AGRN-203ENST00000461111 KRTAP23-1A1A580 65 aa5.17□□□□□ -1.58
AGRN-203ENST00000461111 KRTAP19-2Q3LHN2 52 aa5.16□□□□□ -1.58
AGRN-203ENST00000461111 FLGP20930 4061 aaPredicted RBP5.12□□□□□ -1.59
AGRN-203ENST00000461111 FSIP2Q5CZC0 6907 aa5.11□□□□□ -1.59
AGRN-203ENST00000461111 INE1O15225 51 aa5.08□□□□□ -1.6
AGRN-203ENST00000461111 USH2AO75445 5202 aa5.01□□□□□ -1.61
AGRN-203ENST00000461111 KRTAP19-1Q8IUB9 90 aa5.01□□□□□ -1.61
AGRN-203ENST00000461111 MT1FP04733 61 aa4.95□□□□□ -1.62
AGRN-203ENST00000461111 SPRR2GQ9BYE4 73 aa4.93□□□□□ -1.62
AGRN-203ENST00000461111 KRTAP12-3P60328 96 aa4.91□□□□□ -1.62
AGRN-203ENST00000461111 KMT2DO14686 5537 aa4.91□□□□□ -1.62
AGRN-203ENST00000461111 MT1HP80294 61 aa4.9□□□□□ -1.62
AGRN-203ENST00000461111 MT2AP02795 61 aa4.9□□□□□ -1.63
AGRN-203ENST00000461111 KRTAP8-1Q8IUC2 63 aa4.88□□□□□ -1.63
AGRN-203ENST00000461111 KRTAP10-12P60413 245 aa4.87□□□□□ -1.63
AGRN-203ENST00000461111 KRTAP10-7P60409 375 aaPredicted RBP4.78□□□□□ -1.64
AGRN-203ENST00000461111 KRTAP10-5P60370 271 aa4.74□□□□□ -1.65
AGRN-203ENST00000461111 MT1XP80297 61 aa4.74□□□□□ -1.65
AGRN-203ENST00000461111 KRTAP9-8Q9BYQ0 159 aa4.74□□□□□ -1.65
AGRN-203ENST00000461111 MT1BP07438 61 aa4.71□□□□□ -1.66
AGRN-203ENST00000461111 KRTAP19-5Q3LI72 72 aa4.63□□□□□ -1.67
AGRN-203ENST00000461111 KRTAP19-8Q3LI54 63 aa4.61□□□□□ -1.67
AGRN-203ENST00000461111 KRTAP4-8A0A0G2JLE6 195 aa4.59□□□□□ -1.67
AGRN-203ENST00000461111 KRTAP4-8Q9BYQ9 185 aa4.59□□□□□ -1.67
AGRN-203ENST00000461111 LCE3CQ5T5A8 94 aa4.58□□□□□ -1.68
AGRN-203ENST00000461111 KRTAP4-7Q9BYR0 210 aa4.54□□□□□ -1.68
AGRN-203ENST00000461111 KRTAP9-6A8MVA2 160 aa4.51□□□□□ -1.69
AGRN-203ENST00000461111 KRTAP9-3Q9BYQ3 159 aa4.51□□□□□ -1.69
AGRN-203ENST00000461111 DSTQ03001 7570 aaKnown RBP4.48□□□□□ -1.69
AGRN-203ENST00000461111 CRCT1Q9UGL9 99 aa4.46□□□□□ -1.7
AGRN-203ENST00000461111 OBSCNQ5VST9 7968 aa4.43□□□□□ -1.7
AGRN-203ENST00000461111 FCGBPQ9Y6R7 5405 aaPredicted RBP4.37□□□□□ -1.71
AGRN-203ENST00000461111 SYNE1Q8NF91 8797 aaKnown RBP4.36□□□□□ -1.71
AGRN-203ENST00000461111 KRTAP2-3P0C7H8 128 aa4.32□□□□□ -1.72
AGRN-203ENST00000461111 KRTAP2-4Q9BYR9 128 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms