RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 SSPOA2VEC9 5147 aa6.26□□□□□ -1.41
RAB11FIP3-207ENST00000461009 SMIM20Q8N5G0 67 aa6.26□□□□□ -1.41
RAB11FIP3-207ENST00000461009 LCA10Q71F78 164 aa6.24□□□□□ -1.41
RAB11FIP3-207ENST00000461009 A8MUN3 132 aa6.23□□□□□ -1.41
RAB11FIP3-207ENST00000461009 KLKP1Q107X0 134 aa6.23□□□□□ -1.41
RAB11FIP3-207ENST00000461009 FAM236AA0A1B0GUQ0 79 aa6.22□□□□□ -1.41
RAB11FIP3-207ENST00000461009 FAM236BA0A1B0GV22 79 aa6.22□□□□□ -1.41
RAB11FIP3-207ENST00000461009 TRAV7A0A075B6U4 112 aa6.21□□□□□ -1.42
RAB11FIP3-207ENST00000461009 FCGBPQ9Y6R7 5405 aaPredicted RBP6.16□□□□□ -1.42
RAB11FIP3-207ENST00000461009 NDUFC1O43677 76 aa6.16□□□□□ -1.42
RAB11FIP3-207ENST00000461009 KRTAP19-6Q3LI70 58 aa6.16□□□□□ -1.42
RAB11FIP3-207ENST00000461009 KRTAP3-3Q9BYR6 98 aa6.15□□□□□ -1.42
RAB11FIP3-207ENST00000461009 DMAC1Q96GE9 116 aa6.08□□□□□ -1.44
RAB11FIP3-207ENST00000461009 SERP2Q8N6R1 65 aa6.07□□□□□ -1.44
RAB11FIP3-207ENST00000461009 ACYP2P14621 99 aa6.03□□□□□ -1.44
RAB11FIP3-207ENST00000461009 H0YAA0 97 aa6.02□□□□□ -1.45
RAB11FIP3-207ENST00000461009 SNURFQ9Y675 71 aa6.02□□□□□ -1.45
RAB11FIP3-207ENST00000461009 C20orf197Q8N268 126 aa6□□□□□ -1.45
RAB11FIP3-207ENST00000461009 CRIPTQ9P021 101 aa6□□□□□ -1.45
RAB11FIP3-207ENST00000461009 MACF1Q9UPN3 7388 aaKnown RBP6□□□□□ -1.45
RAB11FIP3-207ENST00000461009 Q5VV11 94 aa5.96□□□□□ -1.46
RAB11FIP3-207ENST00000461009 ADM2Q7Z4H4 148 aa5.96□□□□□ -1.46
RAB11FIP3-207ENST00000461009 SYNE2Q8WXH0 6885 aaKnown RBP5.95□□□□□ -1.46
RAB11FIP3-207ENST00000461009 SPANXA2-OT1Q8N9U9 137 aa5.95□□□□□ -1.46
RAB11FIP3-207ENST00000461009 SPTSSBQ8NFR3 76 aa5.95□□□□□ -1.46
RAB11FIP3-207ENST00000461009 SPRR2GQ9BYE4 73 aa5.95□□□□□ -1.46
RAB11FIP3-207ENST00000461009 COX7CP15954 63 aa5.93□□□□□ -1.46
RAB11FIP3-207ENST00000461009 A6NN06 94 aa5.92□□□□□ -1.46
RAB11FIP3-207ENST00000461009 CHKB-CPT1BH3BT56 60 aa5.92□□□□□ -1.46
RAB11FIP3-207ENST00000461009 KRTAP6-3Q3LI67 103 aa5.91□□□□□ -1.46
RAB11FIP3-207ENST00000461009 KRTAP19-8Q3LI54 63 aa5.88□□□□□ -1.47
RAB11FIP3-207ENST00000461009 MT1BP07438 61 aa5.85□□□□□ -1.47
RAB11FIP3-207ENST00000461009 ANAPC13Q9BS18 74 aa5.83□□□□□ -1.48
RAB11FIP3-207ENST00000461009 R4GN34 69 aa5.82□□□□□ -1.48
RAB11FIP3-207ENST00000461009 P0C880 135 aa5.81□□□□□ -1.48
RAB11FIP3-207ENST00000461009 KRTAP3-2Q9BYR7 98 aa5.79□□□□□ -1.48
RAB11FIP3-207ENST00000461009 KRTAP10-5P60370 271 aa5.78□□□□□ -1.48
RAB11FIP3-207ENST00000461009 H7BZZ5 65 aa5.76□□□□□ -1.49
RAB11FIP3-207ENST00000461009 M0QZ58 72 aa5.76□□□□□ -1.49
RAB11FIP3-207ENST00000461009 COA5Q86WW8 74 aa5.75□□□□□ -1.49
RAB11FIP3-207ENST00000461009 PLAC4Q8WY50 150 aa5.71□□□□□ -1.5
RAB11FIP3-207ENST00000461009 CYSTM1Q9H1C7 97 aa5.71□□□□□ -1.5
RAB11FIP3-207ENST00000461009 CCDC179H3BU77 68 aa5.66□□□□□ -1.5
RAB11FIP3-207ENST00000461009 SEC61GP60059 68 aa5.66□□□□□ -1.5
RAB11FIP3-207ENST00000461009 LINC01554Q52M75 96 aa5.66□□□□□ -1.5
RAB11FIP3-207ENST00000461009 PRO2289Q9P1D8 64 aa5.65□□□□□ -1.5
RAB11FIP3-207ENST00000461009 SERP1Q9Y6X1 66 aa5.64□□□□□ -1.51
RAB11FIP3-207ENST00000461009 ATP5EP56381 51 aaPredicted RBP5.61□□□□□ -1.51
RAB11FIP3-207ENST00000461009 KRTAP5-9P26371 169 aa5.59□□□□□ -1.51
RAB11FIP3-207ENST00000461009 NEBP20929 6669 aa5.58□□□□□ -1.52
RAB11FIP3-207ENST00000461009 MUC12Q9UKN1 5478 aa5.54□□□□□ -1.52
RAB11FIP3-207ENST00000461009 KRTAP20-1Q3LI63 56 aa5.53□□□□□ -1.52
RAB11FIP3-207ENST00000461009 TMEM258P61165 79 aa5.51□□□□□ -1.53
RAB11FIP3-207ENST00000461009 MT1XP80297 61 aa5.51□□□□□ -1.53
RAB11FIP3-207ENST00000461009 A0A1B0GU33 70 aa5.5□□□□□ -1.53
RAB11FIP3-207ENST00000461009 A0A1B0GU69 56 aa5.49□□□□□ -1.53
RAB11FIP3-207ENST00000461009 PCP4P48539 62 aa5.49□□□□□ -1.53
RAB11FIP3-207ENST00000461009 KRTAP13-4Q3LI77 160 aa5.48□□□□□ -1.53
RAB11FIP3-207ENST00000461009 SPRR2FQ96RM1 72 aa5.45□□□□□ -1.54
RAB11FIP3-207ENST00000461009 KRTAP8-1Q8IUC2 63 aa5.43□□□□□ -1.54
RAB11FIP3-207ENST00000461009 KMT2DO14686 5537 aa5.43□□□□□ -1.54
RAB11FIP3-207ENST00000461009 PRR15LQ9BU68 103 aa5.42□□□□□ -1.54
RAB11FIP3-207ENST00000461009 KRTAP12-2P59991 146 aa5.41□□□□□ -1.54
RAB11FIP3-207ENST00000461009 SPATA8Q6RVD6 105 aa5.41□□□□□ -1.54
RAB11FIP3-207ENST00000461009 A0A0D9SG42 100 aa5.4□□□□□ -1.54
RAB11FIP3-207ENST00000461009 SPRR2EP22531 72 aa5.39□□□□□ -1.55
RAB11FIP3-207ENST00000461009 SPRR2BP35325 72 aa5.39□□□□□ -1.55
RAB11FIP3-207ENST00000461009 SPRR2AP35326 72 aa5.39□□□□□ -1.55
RAB11FIP3-207ENST00000461009 CAMK2N1Q7Z7J9 78 aa5.39□□□□□ -1.55
RAB11FIP3-207ENST00000461009 KRTAP2-3P0C7H8 128 aa5.38□□□□□ -1.55
RAB11FIP3-207ENST00000461009 KRTAP2-4Q9BYR9 128 aa5.38□□□□□ -1.55
RAB11FIP3-207ENST00000461009 MDN1Q9NU22 5596 aa5.37□□□□□ -1.55
RAB11FIP3-207ENST00000461009 SMIM26A0A096LP01 95 aa5.37□□□□□ -1.55
RAB11FIP3-207ENST00000461009 LINC01558Q9Y6Z2 57 aa5.37□□□□□ -1.55
RAB11FIP3-207ENST00000461009 SPINT4Q6UDR6 99 aa5.33□□□□□ -1.56
RAB11FIP3-207ENST00000461009 KRTAP12-1P59990 96 aa5.27□□□□□ -1.57
RAB11FIP3-207ENST00000461009 KRTAP10-7P60409 375 aaPredicted RBP5.27□□□□□ -1.57
RAB11FIP3-207ENST00000461009 KRTAP4-8A0A0G2JLE6 195 aa5.26□□□□□ -1.57
RAB11FIP3-207ENST00000461009 KRTAP10-12P60413 245 aa5.26□□□□□ -1.57
RAB11FIP3-207ENST00000461009 LCE1AQ5T7P2 110 aa5.26□□□□□ -1.57
RAB11FIP3-207ENST00000461009 KRTAP4-8Q9BYQ9 185 aa5.26□□□□□ -1.57
RAB11FIP3-207ENST00000461009 A8MU10 97 aa5.23□□□□□ -1.57
RAB11FIP3-207ENST00000461009 UQCR11O14957 56 aa5.23□□□□□ -1.57
RAB11FIP3-207ENST00000461009 V9GYY9 64 aa5.23□□□□□ -1.57
RAB11FIP3-207ENST00000461009 SPRR2DP22532 72 aa5.22□□□□□ -1.57
RAB11FIP3-207ENST00000461009 KRTAP2-2Q9BYT5 123 aa5.2□□□□□ -1.58
RAB11FIP3-207ENST00000461009 KRTAP2-1Q9BYU5 128 aa5.2□□□□□ -1.58
RAB11FIP3-207ENST00000461009 Q1T7F1 81 aa5.15□□□□□ -1.59
RAB11FIP3-207ENST00000461009 MIR22HGQ0VDD5 57 aa5.12□□□□□ -1.59
RAB11FIP3-207ENST00000461009 PSPHP1O15172 72 aa5.1□□□□□ -1.59
RAB11FIP3-207ENST00000461009 RPS28P62857 69 aaKnown RBP5.09□□□□□ -1.59
RAB11FIP3-207ENST00000461009 LCE3BQ5TA77 95 aa5.07□□□□□ -1.6
RAB11FIP3-207ENST00000461009 K7ERS5 55 aa5.04□□□□□ -1.6
RAB11FIP3-207ENST00000461009 TNP1P09430 55 aa5.03□□□□□ -1.6
RAB11FIP3-207ENST00000461009 C10orf95Q9H7T3 257 aa5.01□□□□□ -1.61
RAB11FIP3-207ENST00000461009 A6NED7 52 aa4.97□□□□□ -1.61
RAB11FIP3-207ENST00000461009 KRTAP19-7Q3SYF9 63 aa4.92□□□□□ -1.62
RAB11FIP3-207ENST00000461009 MT1EP04732 61 aa4.88□□□□□ -1.63
RAB11FIP3-207ENST00000461009 KRTAP19-5Q3LI72 72 aa4.88□□□□□ -1.63
RAB11FIP3-207ENST00000461009 LCE5AQ5TCM9 118 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms