RNA–Protein interactions for RNA: ENST00000460797.5

ITGB5-202, Transcript of integrin subunit beta 5, humanhuman

TSL 2

Gene ITGB5, Length 2,228 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-202ENST00000460797 RYR3Q15413 4870 aa6.38□□□□□ -1.39
ITGB5-202ENST00000460797 APOBP04114 4563 aaKnown RBP6.38□□□□□ -1.39
ITGB5-202ENST00000460797 KRTAP13-4Q3LI77 160 aa6.35□□□□□ -1.39
ITGB5-202ENST00000460797 J3QL48 77 aa6.34□□□□□ -1.39
ITGB5-202ENST00000460797 SMR3BP02814 79 aaPredicted RBP6.34□□□□□ -1.39
ITGB5-202ENST00000460797 SPINT4Q6UDR6 99 aa6.34□□□□□ -1.39
ITGB5-202ENST00000460797 KRTAP3-3Q9BYR6 98 aa6.34□□□□□ -1.39
ITGB5-202ENST00000460797 KRTAP3-2Q9BYR7 98 aa6.34□□□□□ -1.39
ITGB5-202ENST00000460797 FAT1Q14517 4588 aa6.3□□□□□ -1.4
ITGB5-202ENST00000460797 KRTAP15-1Q3LI76 137 aa6.3□□□□□ -1.4
ITGB5-202ENST00000460797 A0A0D9SG42 100 aa6.29□□□□□ -1.4
ITGB5-202ENST00000460797 KRTAP10-4P60372 401 aaPredicted RBP6.27□□□□□ -1.41
ITGB5-202ENST00000460797 C10orf95Q9H7T3 257 aa6.25□□□□□ -1.41
ITGB5-202ENST00000460797 S4R3F8 94 aa6.23□□□□□ -1.41
ITGB5-202ENST00000460797 HSPG2P98160 4391 aa6.21□□□□□ -1.42
ITGB5-202ENST00000460797 NDUFAF8A1L188 74 aa6.19□□□□□ -1.42
ITGB5-202ENST00000460797 FAT3Q8TDW7 4589 aa6.19□□□□□ -1.42
ITGB5-202ENST00000460797 KRTAP12-2P59991 146 aa6.18□□□□□ -1.42
ITGB5-202ENST00000460797 LRP1Q07954 4544 aaKnown RBP6.18□□□□□ -1.42
ITGB5-202ENST00000460797 DMBT1Q9UGM3 2413 aaPredicted RBP6.17□□□□□ -1.42
ITGB5-202ENST00000460797 RYR1P21817 5038 aa6.17□□□□□ -1.42
ITGB5-202ENST00000460797 TNXBP22105 4242 aa6.16□□□□□ -1.42
ITGB5-202ENST00000460797 EPPK1P58107 5090 aaKnown RBP6.14□□□□□ -1.43
ITGB5-202ENST00000460797 KRTAP12-1P59990 96 aa6.14□□□□□ -1.43
ITGB5-202ENST00000460797 XP32Q5T750 250 aa6.14□□□□□ -1.43
ITGB5-202ENST00000460797 Q5VSD8 79 aa6.13□□□□□ -1.43
ITGB5-202ENST00000460797 KRTAP10-8P60410 259 aa6.13□□□□□ -1.43
ITGB5-202ENST00000460797 KRTAP17-1Q9BYP8 105 aa6.13□□□□□ -1.43
ITGB5-202ENST00000460797 KIAA1109Q2LD37 5005 aa6.1□□□□□ -1.43
ITGB5-202ENST00000460797 M0QZ58 72 aa6.05□□□□□ -1.44
ITGB5-202ENST00000460797 A0A0A0MQY5 61 aa5.99□□□□□ -1.45
ITGB5-202ENST00000460797 KRTAP4-5Q9BYR2 181 aa5.93□□□□□ -1.46
ITGB5-202ENST00000460797 MYCBP2O75592 4640 aa5.93□□□□□ -1.46
ITGB5-202ENST00000460797 MT1HL1P0DM35 61 aa5.93□□□□□ -1.46
ITGB5-202ENST00000460797 BIRC6Q9NR09 4857 aa5.87□□□□□ -1.47
ITGB5-202ENST00000460797 PLAC4Q8WY50 150 aa5.83□□□□□ -1.48
ITGB5-202ENST00000460797 HERC2O95714 4834 aa5.82□□□□□ -1.48
ITGB5-202ENST00000460797 ABCA13Q86UQ4 5058 aa5.8□□□□□ -1.48
ITGB5-202ENST00000460797 R4GN34 69 aa5.77□□□□□ -1.49
ITGB5-202ENST00000460797 LPAP08519 4548 aa5.76□□□□□ -1.49
ITGB5-202ENST00000460797 LUZP6Q538Z0 58 aa5.71□□□□□ -1.49
ITGB5-202ENST00000460797 PP632Q6XCG6 107 aa5.7□□□□□ -1.5
ITGB5-202ENST00000460797 LRP2P98164 4655 aa5.69□□□□□ -1.5
ITGB5-202ENST00000460797 LCE2DQ5TA82 110 aaPredicted RBP5.68□□□□□ -1.5
ITGB5-202ENST00000460797 LORP23490 312 aaPredicted RBP5.62□□□□□ -1.51
ITGB5-202ENST00000460797 PCLOQ9Y6V0 5065 aa5.57□□□□□ -1.52
ITGB5-202ENST00000460797 MUC17Q685J3 4493 aa5.54□□□□□ -1.52
ITGB5-202ENST00000460797 CAMK2N1Q7Z7J9 78 aa5.5□□□□□ -1.53
ITGB5-202ENST00000460797 HERC1Q15751 4861 aa5.48□□□□□ -1.53
ITGB5-202ENST00000460797 KRTAP23-1A1A580 65 aa5.48□□□□□ -1.53
ITGB5-202ENST00000460797 SEC61BP60468 96 aaKnown RBP5.47□□□□□ -1.53
ITGB5-202ENST00000460797 SPRR5A0A1B0GTR4 108 aa5.46□□□□□ -1.54
ITGB5-202ENST00000460797 HMCN2Q8NDA2 5059 aa5.42□□□□□ -1.54
ITGB5-202ENST00000460797 KRTAP19-2Q3LHN2 52 aa5.39□□□□□ -1.55
ITGB5-202ENST00000460797 KRTAP4-1Q9BYQ7 146 aa5.39□□□□□ -1.55
ITGB5-202ENST00000460797 TNP1P09430 55 aa5.38□□□□□ -1.55
ITGB5-202ENST00000460797 FLGP20930 4061 aaPredicted RBP5.29□□□□□ -1.56
ITGB5-202ENST00000460797 MUC2Q02817 5179 aa5.27□□□□□ -1.57
ITGB5-202ENST00000460797 UBR4Q5T4S7 5183 aa5.15□□□□□ -1.58
ITGB5-202ENST00000460797 PRO2289Q9P1D8 64 aa5.14□□□□□ -1.59
ITGB5-202ENST00000460797 RNF213Q63HN8 5207 aa5.12□□□□□ -1.59
ITGB5-202ENST00000460797 LCE2CQ5TA81 110 aa5.11□□□□□ -1.59
ITGB5-202ENST00000460797 SPRR2GQ9BYE4 73 aa5.07□□□□□ -1.6
ITGB5-202ENST00000460797 INE1O15225 51 aa5.06□□□□□ -1.6
ITGB5-202ENST00000460797 FAT4Q6V0I7 4981 aa5.05□□□□□ -1.6
ITGB5-202ENST00000460797 LCE3AQ5TA76 89 aa5.04□□□□□ -1.6
ITGB5-202ENST00000460797 KRTAP19-1Q8IUB9 90 aa5□□□□□ -1.61
ITGB5-202ENST00000460797 MT1HP80294 61 aa4.98□□□□□ -1.61
ITGB5-202ENST00000460797 KRTAP8-1Q8IUC2 63 aa4.97□□□□□ -1.61
ITGB5-202ENST00000460797 M0R2T5 61 aa4.93□□□□□ -1.62
ITGB5-202ENST00000460797 LCE2AQ5TA79 106 aaPredicted RBP4.82□□□□□ -1.64
ITGB5-202ENST00000460797 KRTAP9-8Q9BYQ0 159 aa4.82□□□□□ -1.64
ITGB5-202ENST00000460797 LCE2BO14633 110 aa4.8□□□□□ -1.64
ITGB5-202ENST00000460797 MT2AP02795 61 aa4.8□□□□□ -1.64
ITGB5-202ENST00000460797 KRTAP19-8Q3LI54 63 aa4.8□□□□□ -1.64
ITGB5-202ENST00000460797 KRTAP12-3P60328 96 aa4.8□□□□□ -1.64
ITGB5-202ENST00000460797 MT1FP04733 61 aa4.78□□□□□ -1.64
ITGB5-202ENST00000460797 KRTAP10-12P60413 245 aa4.77□□□□□ -1.65
ITGB5-202ENST00000460797 KRTAP10-10P60014 251 aa4.76□□□□□ -1.65
ITGB5-202ENST00000460797 KRTAP10-5P60370 271 aa4.76□□□□□ -1.65
ITGB5-202ENST00000460797 MT1XP80297 61 aa4.74□□□□□ -1.65
ITGB5-202ENST00000460797 MT1BP07438 61 aa4.69□□□□□ -1.66
ITGB5-202ENST00000460797 KRTAP9-3Q9BYQ3 159 aa4.64□□□□□ -1.67
ITGB5-202ENST00000460797 KRTAP10-7P60409 375 aaPredicted RBP4.61□□□□□ -1.67
ITGB5-202ENST00000460797 LCE3CQ5T5A8 94 aa4.54□□□□□ -1.68
ITGB5-202ENST00000460797 KRTAP19-5Q3LI72 72 aa4.48□□□□□ -1.69
ITGB5-202ENST00000460797 KRTAP2-3P0C7H8 128 aa4.41□□□□□ -1.7
ITGB5-202ENST00000460797 KRTAP2-4Q9BYR9 128 aa4.41□□□□□ -1.7
ITGB5-202ENST00000460797 KRTAP2-1Q9BYU5 128 aa4.41□□□□□ -1.7
ITGB5-202ENST00000460797 KRTAP9-6A8MVA2 160 aa4.39□□□□□ -1.71
ITGB5-202ENST00000460797 USH2AO75445 5202 aa4.37□□□□□ -1.71
ITGB5-202ENST00000460797 KRTAP19-4Q3LI73 84 aa4.3□□□□□ -1.72
ITGB5-202ENST00000460797 SSPOA2VEC9 5147 aa4.23□□□□□ -1.73
ITGB5-202ENST00000460797 KRTAP19-7Q3SYF9 63 aa4.22□□□□□ -1.73
ITGB5-202ENST00000460797 KRTAP4-8A0A0G2JLE6 195 aa4.21□□□□□ -1.74
ITGB5-202ENST00000460797 KRTAP4-8Q9BYQ9 185 aa4.21□□□□□ -1.74
ITGB5-202ENST00000460797 KMT2DO14686 5537 aa4.2□□□□□ -1.74
ITGB5-202ENST00000460797 FSIP2Q5CZC0 6907 aa4.19□□□□□ -1.74
ITGB5-202ENST00000460797 KRTAP19-6Q3LI70 58 aa4.19□□□□□ -1.74
ITGB5-202ENST00000460797 KRTAP4-7Q9BYR0 210 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms