RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 DCHS1Q96JQ0 3298 aa-0.25□□□□□ -2.45
VBP1-202ENST00000460509 VPS13BQ7Z7G8 4022 aa-0.25□□□□□ -2.45
VBP1-202ENST00000460509 A0A0C4DFX4 3053 aa-0.26□□□□□ -2.45
VBP1-202ENST00000460509 WDR87Q6ZQQ6 2873 aa-0.26□□□□□ -2.45
VBP1-202ENST00000460509 NBEAL1Q6ZS30 2694 aa-0.26□□□□□ -2.45
VBP1-202ENST00000460509 TFF3Q07654 80 aa-0.26□□□□□ -2.45
VBP1-202ENST00000460509 KRTAP19-5Q3LI72 72 aa-0.26□□□□□ -2.45
VBP1-202ENST00000460509 PKD1L2Q7Z442 2459 aa-0.26□□□□□ -2.45
VBP1-202ENST00000460509 CSMD2Q7Z408 3487 aa-0.26□□□□□ -2.45
VBP1-202ENST00000460509 GCN1Q92616 2671 aaKnown RBP-0.27□□□□□ -2.45
VBP1-202ENST00000460509 DYNC1H1Q14204 4646 aaKnown RBP-0.27□□□□□ -2.45
VBP1-202ENST00000460509 APOBP04114 4563 aaKnown RBP-0.27□□□□□ -2.45
VBP1-202ENST00000460509 DMXL2Q8TDJ6 3036 aa-0.27□□□□□ -2.45
VBP1-202ENST00000460509 NIPBLQ6KC79 2804 aaeCLIP-0.27□□□□□ -2.45
VBP1-202ENST00000460509 MXRA5Q9NR99 2828 aa-0.27□□□□□ -2.45
VBP1-202ENST00000460509 DNAH7Q8WXX0 4024 aa-0.27□□□□□ -2.45
VBP1-202ENST00000460509 FASNP49327 2511 aaKnown RBP-0.27□□□□□ -2.45
VBP1-202ENST00000460509 DNAH5Q8TE73 4624 aa-0.27□□□□□ -2.45
VBP1-202ENST00000460509 SACSQ9NZJ4 4579 aa-0.27□□□□□ -2.45
VBP1-202ENST00000460509 DMXL1Q9Y485 3027 aa-0.27□□□□□ -2.45
VBP1-202ENST00000460509 MUC17Q685J3 4493 aa-0.28□□□□□ -2.45
VBP1-202ENST00000460509 SPENQ96T58 3664 aaKnown RBP-0.28□□□□□ -2.45
VBP1-202ENST00000460509 PCNTO95613 3336 aa-0.28□□□□□ -2.45
VBP1-202ENST00000460509 A8MTW9 85 aa-0.28□□□□□ -2.45
VBP1-202ENST00000460509 TGP01266 2768 aa-0.28□□□□□ -2.45
VBP1-202ENST00000460509 USP9YO00507 2555 aaPredicted RBP-0.28□□□□□ -2.45
VBP1-202ENST00000460509 MGAM2Q2M2H8 2515 aa-0.28□□□□□ -2.45
VBP1-202ENST00000460509 KALRNO60229 2985 aa-0.29□□□□□ -2.46
VBP1-202ENST00000460509 RELNP78509 3460 aa-0.29□□□□□ -2.46
VBP1-202ENST00000460509 M0QZ58 72 aa-0.29□□□□□ -2.46
VBP1-202ENST00000460509 ZZEF1O43149 2961 aa-0.29□□□□□ -2.46
VBP1-202ENST00000460509 MUC3AQ02505 3323 aa-0.29□□□□□ -2.46
VBP1-202ENST00000460509 BOD1L1Q8NFC6 3051 aa-0.29□□□□□ -2.46
VBP1-202ENST00000460509 SPEGQ15772 3267 aa-0.3□□□□□ -2.46
VBP1-202ENST00000460509 WDFY4Q6ZS81 3184 aa-0.3□□□□□ -2.46
VBP1-202ENST00000460509 IQGAP2Q13576 1575 aa-0.3□□□□□ -2.46
VBP1-202ENST00000460509 KRTAP8-1Q8IUC2 63 aa-0.3□□□□□ -2.46
VBP1-202ENST00000460509 ANKRD11Q6UB99 2663 aaPredicted RBP-0.3□□□□□ -2.46
VBP1-202ENST00000460509 TACC2O95359 2948 aa-0.3□□□□□ -2.46
VBP1-202ENST00000460509 EYSQ5T1H1 3165 aa-0.3□□□□□ -2.46
VBP1-202ENST00000460509 SMG1Q96Q15 3661 aaKnown RBP-0.3□□□□□ -2.46
VBP1-202ENST00000460509 USP9XQ93008 2570 aaPredicted RBP-0.3□□□□□ -2.46
VBP1-202ENST00000460509 VCANP13611 3396 aa-0.3□□□□□ -2.46
VBP1-202ENST00000460509 PKHD1L1Q86WI1 4243 aa-0.3□□□□□ -2.46
VBP1-202ENST00000460509 NBEAQ8NFP9 2946 aa-0.31□□□□□ -2.46
VBP1-202ENST00000460509 NBPF19A0A087WUL8 3843 aa-0.31□□□□□ -2.46
VBP1-202ENST00000460509 TRPM2O94759 1503 aa-0.31□□□□□ -2.46
VBP1-202ENST00000460509 SMIM2Q9BVW6 85 aa-0.31□□□□□ -2.46
VBP1-202ENST00000460509 TRIOO75962 3097 aa-0.31□□□□□ -2.46
VBP1-202ENST00000460509 FAM186AA6NE01 2351 aa-0.31□□□□□ -2.46
VBP1-202ENST00000460509 VPS13DQ5THJ4 4388 aa-0.31□□□□□ -2.46
VBP1-202ENST00000460509 MYO18BQ8IUG5 2567 aa-0.31□□□□□ -2.46
VBP1-202ENST00000460509 CLTCL1P53675 1640 aa-0.31□□□□□ -2.46
VBP1-202ENST00000460509 ANK3Q12955 4377 aaKnown RBP-0.31□□□□□ -2.46
VBP1-202ENST00000460509 TRRAPQ9Y4A5 3859 aa-0.32□□□□□ -2.46
VBP1-202ENST00000460509 SZT2Q5T011 3432 aa-0.32□□□□□ -2.46
VBP1-202ENST00000460509 DNAH2Q9P225 4427 aa-0.32□□□□□ -2.46
VBP1-202ENST00000460509 TEX15Q9BXT5 2789 aa-0.32□□□□□ -2.46
VBP1-202ENST00000460509 CHD7Q9P2D1 2997 aa-0.32□□□□□ -2.46
VBP1-202ENST00000460509 C5orf42Q9H799 3197 aa-0.32□□□□□ -2.46
VBP1-202ENST00000460509 USP34Q70CQ2 3546 aa-0.33□□□□□ -2.46
VBP1-202ENST00000460509 EPG5Q9HCE0 2579 aa-0.33□□□□□ -2.46
VBP1-202ENST00000460509 DNAH3Q8TD57 4116 aa-0.33□□□□□ -2.46
VBP1-202ENST00000460509 LOC400499M0QZD8 3231 aa-0.33□□□□□ -2.46
VBP1-202ENST00000460509 MYO9AB2RTY4 2548 aa-0.33□□□□□ -2.46
VBP1-202ENST00000460509 MTORP42345 2549 aa-0.33□□□□□ -2.46
VBP1-202ENST00000460509 WDFY3Q8IZQ1 3526 aa-0.33□□□□□ -2.46
VBP1-202ENST00000460509 DEFB131AP59861 70 aa-0.33□□□□□ -2.46
VBP1-202ENST00000460509 CEP295Q9C0D2 2601 aa-0.33□□□□□ -2.46
VBP1-202ENST00000460509 ITPR1Q14643 2758 aa-0.33□□□□□ -2.46
VBP1-202ENST00000460509 RANBP2P49792 3224 aaKnown RBP-0.33□□□□□ -2.46
VBP1-202ENST00000460509 DNAH11Q96DT5 4516 aa-0.33□□□□□ -2.46
VBP1-202ENST00000460509 MGAQ8IWI9 3026 aa-0.33□□□□□ -2.46
VBP1-202ENST00000460509 ACACBO00763 2458 aa-0.33□□□□□ -2.46
VBP1-202ENST00000460509 CFAP54Q96N23 3096 aa-0.34□□□□□ -2.46
VBP1-202ENST00000460509 CLPSL2Q6UWE3 100 aa-0.34□□□□□ -2.46
VBP1-202ENST00000460509 HTTP42858 3142 aa-0.34□□□□□ -2.46
VBP1-202ENST00000460509 DNAH14Q0VDD8 3507 aa-0.34□□□□□ -2.46
VBP1-202ENST00000460509 CMYA5Q8N3K9 4069 aa-0.34□□□□□ -2.46
VBP1-202ENST00000460509 DNAH8Q96JB1 4490 aa-0.34□□□□□ -2.46
VBP1-202ENST00000460509 DNAH6Q9C0G6 4158 aa-0.35□□□□□ -2.46
VBP1-202ENST00000460509 LRBAP50851 2863 aa-0.35□□□□□ -2.46
VBP1-202ENST00000460509 ITPR3Q14573 2671 aa-0.35□□□□□ -2.47
VBP1-202ENST00000460509 TLN1Q9Y490 2541 aaKnown RBP-0.35□□□□□ -2.47
VBP1-202ENST00000460509 SMR3BP02814 79 aaPredicted RBP-0.35□□□□□ -2.47
VBP1-202ENST00000460509 MKI67P46013 3256 aaKnown RBP-0.35□□□□□ -2.47
VBP1-202ENST00000460509 ITPR2Q14571 2701 aa-0.35□□□□□ -2.47
VBP1-202ENST00000460509 FREM2Q5SZK8 3169 aa-0.35□□□□□ -2.47
VBP1-202ENST00000460509 CRYBG3Q68DQ2 2970 aa-0.36□□□□□ -2.47
VBP1-202ENST00000460509 ADGRG4Q8IZF6 3080 aa-0.36□□□□□ -2.47
VBP1-202ENST00000460509 TLN2Q9Y4G6 2542 aa-0.36□□□□□ -2.47
VBP1-202ENST00000460509 CENPEQ02224 2701 aa-0.36□□□□□ -2.47
VBP1-202ENST00000460509 DMDP11532 3685 aa-0.36□□□□□ -2.47
VBP1-202ENST00000460509 FRYQ5TBA9 3013 aa-0.36□□□□□ -2.47
VBP1-202ENST00000460509 SPG11Q96JI7 2443 aa-0.36□□□□□ -2.47
VBP1-202ENST00000460509 DNAH9Q9NYC9 4486 aa-0.36□□□□□ -2.47
VBP1-202ENST00000460509 UTRNP46939 3433 aa-0.36□□□□□ -2.47
VBP1-202ENST00000460509 DNAH17Q9UFH2 4485 aa-0.37□□□□□ -2.47
VBP1-202ENST00000460509 CFAP46Q8IYW2 2715 aa-0.37□□□□□ -2.47
VBP1-202ENST00000460509 ASPMQ8IZT6 3477 aa-0.37□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms