RNA–Protein interactions for RNA: ENST00000460428.5

SFPQ-202, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-202ENST00000460428 CHKB-CPT1BH3BT56 60 aa4.13□□□□□ -1.75
SFPQ-202ENST00000460428 SEC61BP60468 96 aaKnown RBP4.12□□□□□ -1.75
SFPQ-202ENST00000460428 KRTAP9-2Q9BYQ4 174 aa4.12□□□□□ -1.75
SFPQ-202ENST00000460428 KRTAP9-6A0A140TA67 174 aa4.11□□□□□ -1.75
SFPQ-202ENST00000460428 Q5VV11 94 aa4.09□□□□□ -1.75
SFPQ-202ENST00000460428 SPTSSBQ8NFR3 76 aa4.09□□□□□ -1.75
SFPQ-202ENST00000460428 PSPHP1O15172 72 aa4.06□□□□□ -1.76
SFPQ-202ENST00000460428 PRR15LQ9BU68 103 aa4.06□□□□□ -1.76
SFPQ-202ENST00000460428 PCLOQ9Y6V0 5065 aa4.05□□□□□ -1.76
SFPQ-202ENST00000460428 H1FX-AS1Q4G0G2 97 aa4.05□□□□□ -1.76
SFPQ-202ENST00000460428 RBM12B-AS1Q9P1G2 102 aa4.04□□□□□ -1.76
SFPQ-202ENST00000460428 KRTAP4-1Q9BYQ7 146 aa4.02□□□□□ -1.77
SFPQ-202ENST00000460428 A0A1B0GU69 56 aa4.01□□□□□ -1.77
SFPQ-202ENST00000460428 HMCN2Q8NDA2 5059 aa4□□□□□ -1.77
SFPQ-202ENST00000460428 KRTAP19-2Q3LHN2 52 aa4□□□□□ -1.77
SFPQ-202ENST00000460428 LCA10Q71F78 164 aa4□□□□□ -1.77
SFPQ-202ENST00000460428 S4R3F8 94 aa4□□□□□ -1.77
SFPQ-202ENST00000460428 HERC1Q15751 4861 aa3.99□□□□□ -1.77
SFPQ-202ENST00000460428 SEC61GP60059 68 aa3.97□□□□□ -1.77
SFPQ-202ENST00000460428 LCE2AQ5TA79 106 aaPredicted RBP3.97□□□□□ -1.77
SFPQ-202ENST00000460428 KRTAP4-8A0A0G2JLE6 195 aa3.96□□□□□ -1.78
SFPQ-202ENST00000460428 PRO0628Q9UI54 55 aa3.96□□□□□ -1.78
SFPQ-202ENST00000460428 LCE2CQ5TA81 110 aa3.95□□□□□ -1.78
SFPQ-202ENST00000460428 CDC42SE1Q9NRR8 79 aa3.95□□□□□ -1.78
SFPQ-202ENST00000460428 A6NED7 52 aa3.94□□□□□ -1.78
SFPQ-202ENST00000460428 LCE3BQ5TA77 95 aa3.94□□□□□ -1.78
SFPQ-202ENST00000460428 SPATA8Q6RVD6 105 aa3.94□□□□□ -1.78
SFPQ-202ENST00000460428 BRK1Q8WUW1 75 aa3.94□□□□□ -1.78
SFPQ-202ENST00000460428 UQCR11O14957 56 aa3.93□□□□□ -1.78
SFPQ-202ENST00000460428 CSAG1Q6PB30 78 aa3.93□□□□□ -1.78
SFPQ-202ENST00000460428 H0YAA0 97 aa3.92□□□□□ -1.78
SFPQ-202ENST00000460428 KRTAP10-6P60371 365 aaPredicted RBP3.92□□□□□ -1.78
SFPQ-202ENST00000460428 KRTAP9-9Q9BYP9 154 aa3.91□□□□□ -1.78
SFPQ-202ENST00000460428 KRTAP9-4Q9BYQ2 154 aa3.91□□□□□ -1.78
SFPQ-202ENST00000460428 A0A1B0GU33 70 aa3.89□□□□□ -1.79
SFPQ-202ENST00000460428 MIR22HGQ0VDD5 57 aa3.88□□□□□ -1.79
SFPQ-202ENST00000460428 A8MU10 97 aa3.87□□□□□ -1.79
SFPQ-202ENST00000460428 KRTAP4-7Q9BYR0 210 aa3.86□□□□□ -1.79
SFPQ-202ENST00000460428 FLGP20930 4061 aaPredicted RBP3.84□□□□□ -1.79
SFPQ-202ENST00000460428 P0C880 135 aa3.83□□□□□ -1.8
SFPQ-202ENST00000460428 SVIPQ8NHG7 77 aa3.83□□□□□ -1.8
SFPQ-202ENST00000460428 ADM2Q7Z4H4 148 aa3.82□□□□□ -1.8
SFPQ-202ENST00000460428 LORP23490 312 aaPredicted RBP3.81□□□□□ -1.8
SFPQ-202ENST00000460428 M0QZ58 72 aa3.8□□□□□ -1.8
SFPQ-202ENST00000460428 MUC2Q02817 5179 aa3.79□□□□□ -1.8
SFPQ-202ENST00000460428 KRTAP13-4Q3LI77 160 aa3.78□□□□□ -1.8
SFPQ-202ENST00000460428 A6NN06 94 aa3.77□□□□□ -1.81
SFPQ-202ENST00000460428 PMAIP1Q13794 54 aa3.76□□□□□ -1.81
SFPQ-202ENST00000460428 KRTAP4-12Q9BQ66 201 aa3.76□□□□□ -1.81
SFPQ-202ENST00000460428 MT1HP80294 61 aa3.73□□□□□ -1.81
SFPQ-202ENST00000460428 KRTAP5-3Q6L8H2 238 aa3.73□□□□□ -1.81
SFPQ-202ENST00000460428 KRTAP9-8Q9BYQ0 159 aa3.72□□□□□ -1.81
SFPQ-202ENST00000460428 KRTAP4-2Q9BYR5 136 aa3.72□□□□□ -1.81
SFPQ-202ENST00000460428 CRIPTQ9P021 101 aa3.72□□□□□ -1.81
SFPQ-202ENST00000460428 RNF213Q63HN8 5207 aa3.72□□□□□ -1.81
SFPQ-202ENST00000460428 UBR4Q5T4S7 5183 aa3.7□□□□□ -1.82
SFPQ-202ENST00000460428 K7ERS5 55 aa3.68□□□□□ -1.82
SFPQ-202ENST00000460428 R4GN34 69 aa3.68□□□□□ -1.82
SFPQ-202ENST00000460428 LCE1DQ5T752 114 aa3.67□□□□□ -1.82
SFPQ-202ENST00000460428 FAT4Q6V0I7 4981 aa3.67□□□□□ -1.82
SFPQ-202ENST00000460428 KRTAP12-1P59990 96 aa3.66□□□□□ -1.82
SFPQ-202ENST00000460428 A0A0D9SG42 100 aa3.65□□□□□ -1.83
SFPQ-202ENST00000460428 KTN1-AS1Q86SY8 53 aa3.65□□□□□ -1.83
SFPQ-202ENST00000460428 KRTAP12-2P59991 146 aa3.63□□□□□ -1.83
SFPQ-202ENST00000460428 KRTAP4-9Q9BYQ8 210 aa3.63□□□□□ -1.83
SFPQ-202ENST00000460428 M0R2T5 61 aa3.62□□□□□ -1.83
SFPQ-202ENST00000460428 SPRR2GQ9BYE4 73 aa3.61□□□□□ -1.83
SFPQ-202ENST00000460428 MT2AP02795 61 aa3.6□□□□□ -1.83
SFPQ-202ENST00000460428 MT1FP04733 61 aa3.57□□□□□ -1.84
SFPQ-202ENST00000460428 SPINT4Q6UDR6 99 aa3.57□□□□□ -1.84
SFPQ-202ENST00000460428 KRTAP19-1Q8IUB9 90 aa3.57□□□□□ -1.84
SFPQ-202ENST00000460428 ROMO1P60602 79 aa3.56□□□□□ -1.84
SFPQ-202ENST00000460428 LINC01554Q52M75 96 aa3.55□□□□□ -1.84
SFPQ-202ENST00000460428 KRTAP10-10P60014 251 aa3.52□□□□□ -1.85
SFPQ-202ENST00000460428 KRTAP19-8Q3LI54 63 aa3.51□□□□□ -1.85
SFPQ-202ENST00000460428 KRTAP9-3Q9BYQ3 159 aa3.51□□□□□ -1.85
SFPQ-202ENST00000460428 PRAC1Q96KF2 57 aa3.48□□□□□ -1.85
SFPQ-202ENST00000460428 C10orf95Q9H7T3 257 aa3.46□□□□□ -1.86
SFPQ-202ENST00000460428 KRTAP25-1Q3LHN0 102 aa3.45□□□□□ -1.86
SFPQ-202ENST00000460428 PLAC4Q8WY50 150 aa3.44□□□□□ -1.86
SFPQ-202ENST00000460428 MT1BP07438 61 aa3.43□□□□□ -1.86
SFPQ-202ENST00000460428 CAMK2N1Q7Z7J9 78 aa3.43□□□□□ -1.86
SFPQ-202ENST00000460428 KRTAP4-11Q9BYQ6 195 aa3.42□□□□□ -1.86
SFPQ-202ENST00000460428 KRTAP23-1A1A580 65 aa3.35□□□□□ -1.87
SFPQ-202ENST00000460428 TNP1P09430 55 aa3.33□□□□□ -1.88
SFPQ-202ENST00000460428 KRTAP10-5P60370 271 aa3.32□□□□□ -1.88
SFPQ-202ENST00000460428 MT1XP80297 61 aa3.32□□□□□ -1.88
SFPQ-202ENST00000460428 PP632Q6XCG6 107 aa3.32□□□□□ -1.88
SFPQ-202ENST00000460428 PRO2289Q9P1D8 64 aa3.26□□□□□ -1.89
SFPQ-202ENST00000460428 H3BS24 57 aa3.22□□□□□ -1.89
SFPQ-202ENST00000460428 USH2AO75445 5202 aa3.19□□□□□ -1.9
SFPQ-202ENST00000460428 KRTAP10-12P60413 245 aa3.18□□□□□ -1.9
SFPQ-202ENST00000460428 KRTAP19-6Q3LI70 58 aa3.18□□□□□ -1.9
SFPQ-202ENST00000460428 KRTAP10-7P60409 375 aaPredicted RBP3.17□□□□□ -1.9
SFPQ-202ENST00000460428 KRTAP8-1Q8IUC2 63 aa3.17□□□□□ -1.9
SFPQ-202ENST00000460428 LCE3AQ5TA76 89 aa3.16□□□□□ -1.9
SFPQ-202ENST00000460428 KRTAP15-1Q3LI76 137 aa3.09□□□□□ -1.91
SFPQ-202ENST00000460428 SSPOA2VEC9 5147 aa3.09□□□□□ -1.91
SFPQ-202ENST00000460428 KRTAP12-3P60328 96 aa3.05□□□□□ -1.92
SFPQ-202ENST00000460428 SPRR5A0A1B0GTR4 108 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms