RNA–Protein interactions for RNA: ENST00000460308.6

ABCD4-202, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-202ENST00000460308 FAM236BA0A1B0GV22 79 aa9.96□□□□□ -0.82
ABCD4-202ENST00000460308 A8MUN3 132 aa9.94□□□□□ -0.82
ABCD4-202ENST00000460308 KRTAP3-3Q9BYR6 98 aa9.92□□□□□ -0.82
ABCD4-202ENST00000460308 NDUFC1O43677 76 aa9.88□□□□□ -0.83
ABCD4-202ENST00000460308 SMIM20Q8N5G0 67 aa9.88□□□□□ -0.83
ABCD4-202ENST00000460308 SSPOA2VEC9 5147 aa9.86□□□□□ -0.83
ABCD4-202ENST00000460308 TRAV7A0A075B6U4 112 aa9.83□□□□□ -0.84
ABCD4-202ENST00000460308 KRTAP19-1Q8IUB9 90 aa9.77□□□□□ -0.85
ABCD4-202ENST00000460308 DMAC1Q96GE9 116 aa9.72□□□□□ -0.85
ABCD4-202ENST00000460308 H0YAA0 97 aa9.67□□□□□ -0.86
ABCD4-202ENST00000460308 KRTAP19-6Q3LI70 58 aa9.64□□□□□ -0.87
ABCD4-202ENST00000460308 SPRR2GQ9BYE4 73 aa9.64□□□□□ -0.87
ABCD4-202ENST00000460308 CRIPTQ9P021 101 aa9.64□□□□□ -0.87
ABCD4-202ENST00000460308 FCGBPQ9Y6R7 5405 aaPredicted RBP9.63□□□□□ -0.87
ABCD4-202ENST00000460308 SNURFQ9Y675 71 aa9.61□□□□□ -0.87
ABCD4-202ENST00000460308 ADM2Q7Z4H4 148 aa9.6□□□□□ -0.87
ABCD4-202ENST00000460308 ACYP2P14621 99 aa9.59□□□□□ -0.87
ABCD4-202ENST00000460308 SERP2Q8N6R1 65 aa9.59□□□□□ -0.87
ABCD4-202ENST00000460308 Q5VV11 94 aa9.58□□□□□ -0.88
ABCD4-202ENST00000460308 C20orf197Q8N268 126 aa9.54□□□□□ -0.88
ABCD4-202ENST00000460308 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.53□□□□□ -0.88
ABCD4-202ENST00000460308 KRTAP19-8Q3LI54 63 aa9.53□□□□□ -0.88
ABCD4-202ENST00000460308 MT1BP07438 61 aa9.49□□□□□ -0.89
ABCD4-202ENST00000460308 SPTSSBQ8NFR3 76 aa9.45□□□□□ -0.9
ABCD4-202ENST00000460308 CHKB-CPT1BH3BT56 60 aa9.44□□□□□ -0.9
ABCD4-202ENST00000460308 SPANXA2-OT1Q8N9U9 137 aa9.43□□□□□ -0.9
ABCD4-202ENST00000460308 P0C880 135 aa9.37□□□□□ -0.91
ABCD4-202ENST00000460308 A6NN06 94 aa9.36□□□□□ -0.91
ABCD4-202ENST00000460308 COX7CP15954 63 aa9.36□□□□□ -0.91
ABCD4-202ENST00000460308 R4GN34 69 aa9.36□□□□□ -0.91
ABCD4-202ENST00000460308 KRTAP9-7A8MTY7 169 aa9.35□□□□□ -0.91
ABCD4-202ENST00000460308 KRTAP3-2Q9BYR7 98 aa9.31□□□□□ -0.92
ABCD4-202ENST00000460308 M0QZ58 72 aa9.29□□□□□ -0.92
ABCD4-202ENST00000460308 MACF1Q9UPN3 7388 aaKnown RBP9.28□□□□□ -0.92
ABCD4-202ENST00000460308 KRTAP10-5P60370 271 aa9.24□□□□□ -0.93
ABCD4-202ENST00000460308 PLAC4Q8WY50 150 aa9.21□□□□□ -0.94
ABCD4-202ENST00000460308 ANAPC13Q9BS18 74 aa9.18□□□□□ -0.94
ABCD4-202ENST00000460308 SYNE2Q8WXH0 6885 aaKnown RBP9.16□□□□□ -0.94
ABCD4-202ENST00000460308 LINC01554Q52M75 96 aa9.16□□□□□ -0.94
ABCD4-202ENST00000460308 COA5Q86WW8 74 aa9.16□□□□□ -0.94
ABCD4-202ENST00000460308 H7BZZ5 65 aa9.14□□□□□ -0.95
ABCD4-202ENST00000460308 CYSTM1Q9H1C7 97 aa9.11□□□□□ -0.95
ABCD4-202ENST00000460308 PRO2289Q9P1D8 64 aa9.08□□□□□ -0.96
ABCD4-202ENST00000460308 KRTAP6-3Q3LI67 103 aa9.01□□□□□ -0.97
ABCD4-202ENST00000460308 SEC61GP60059 68 aa8.99□□□□□ -0.97
ABCD4-202ENST00000460308 MT1XP80297 61 aa8.97□□□□□ -0.97
ABCD4-202ENST00000460308 CCDC179H3BU77 68 aa8.96□□□□□ -0.98
ABCD4-202ENST00000460308 SERP1Q9Y6X1 66 aa8.96□□□□□ -0.98
ABCD4-202ENST00000460308 KRTAP13-4Q3LI77 160 aa8.84□□□□□ -0.99
ABCD4-202ENST00000460308 ATP5EP56381 51 aaPredicted RBP8.81□□□□□ -1
ABCD4-202ENST00000460308 A0A1B0GU33 70 aa8.76□□□□□ -1.01
ABCD4-202ENST00000460308 A0A1B0GU69 56 aa8.72□□□□□ -1.01
ABCD4-202ENST00000460308 KRTAP12-2P59991 146 aa8.71□□□□□ -1.02
ABCD4-202ENST00000460308 SPATA8Q6RVD6 105 aa8.69□□□□□ -1.02
ABCD4-202ENST00000460308 A0A0D9SG42 100 aa8.68□□□□□ -1.02
ABCD4-202ENST00000460308 KRTAP5-9P26371 169 aa8.67□□□□□ -1.02
ABCD4-202ENST00000460308 CAMK2N1Q7Z7J9 78 aa8.67□□□□□ -1.02
ABCD4-202ENST00000460308 KMT2DO14686 5537 aa8.66□□□□□ -1.02
ABCD4-202ENST00000460308 TMEM258P61165 79 aa8.65□□□□□ -1.02
ABCD4-202ENST00000460308 MUC12Q9UKN1 5478 aa8.63□□□□□ -1.03
ABCD4-202ENST00000460308 KRTAP8-1Q8IUC2 63 aa8.6□□□□□ -1.03
ABCD4-202ENST00000460308 KRTAP10-7P60409 375 aaPredicted RBP8.58□□□□□ -1.04
ABCD4-202ENST00000460308 NEBP20929 6669 aa8.57□□□□□ -1.04
ABCD4-202ENST00000460308 SPINT4Q6UDR6 99 aa8.56□□□□□ -1.04
ABCD4-202ENST00000460308 PRR15LQ9BU68 103 aa8.56□□□□□ -1.04
ABCD4-202ENST00000460308 SPRR2FQ96RM1 72 aa8.54□□□□□ -1.04
ABCD4-202ENST00000460308 SMIM26A0A096LP01 95 aa8.53□□□□□ -1.04
ABCD4-202ENST00000460308 KRTAP10-12P60413 245 aa8.52□□□□□ -1.05
ABCD4-202ENST00000460308 KRTAP4-8A0A0G2JLE6 195 aa8.51□□□□□ -1.05
ABCD4-202ENST00000460308 KRTAP4-8Q9BYQ9 185 aa8.51□□□□□ -1.05
ABCD4-202ENST00000460308 LINC01558Q9Y6Z2 57 aa8.48□□□□□ -1.05
ABCD4-202ENST00000460308 KRTAP12-1P59990 96 aa8.45□□□□□ -1.06
ABCD4-202ENST00000460308 MDN1Q9NU22 5596 aa8.41□□□□□ -1.06
ABCD4-202ENST00000460308 A8MU10 97 aa8.4□□□□□ -1.06
ABCD4-202ENST00000460308 SPRR2EP22531 72 aa8.35□□□□□ -1.07
ABCD4-202ENST00000460308 SPRR2BP35325 72 aa8.35□□□□□ -1.07
ABCD4-202ENST00000460308 SPRR2AP35326 72 aa8.35□□□□□ -1.07
ABCD4-202ENST00000460308 UQCR11O14957 56 aa8.26□□□□□ -1.09
ABCD4-202ENST00000460308 KRTAP20-1Q3LI63 56 aa8.24□□□□□ -1.09
ABCD4-202ENST00000460308 LCE1AQ5T7P2 110 aa8.23□□□□□ -1.09
ABCD4-202ENST00000460308 V9GYY9 64 aa8.19□□□□□ -1.1
ABCD4-202ENST00000460308 KRTAP2-3P0C7H8 128 aa8.1□□□□□ -1.11
ABCD4-202ENST00000460308 KRTAP2-4Q9BYR9 128 aa8.1□□□□□ -1.11
ABCD4-202ENST00000460308 MIR22HGQ0VDD5 57 aa8.09□□□□□ -1.11
ABCD4-202ENST00000460308 Q1T7F1 81 aa8.09□□□□□ -1.11
ABCD4-202ENST00000460308 PSPHP1O15172 72 aa8.08□□□□□ -1.12
ABCD4-202ENST00000460308 SPRR2DP22532 72 aa8.07□□□□□ -1.12
ABCD4-202ENST00000460308 C10orf95Q9H7T3 257 aa8.07□□□□□ -1.12
ABCD4-202ENST00000460308 TNP1P09430 55 aa8.05□□□□□ -1.12
ABCD4-202ENST00000460308 PCP4P48539 62 aa8.05□□□□□ -1.12
ABCD4-202ENST00000460308 KRTAP19-7Q3SYF9 63 aa8□□□□□ -1.13
ABCD4-202ENST00000460308 K7ERS5 55 aa7.95□□□□□ -1.14
ABCD4-202ENST00000460308 MT1EP04732 61 aa7.94□□□□□ -1.14
ABCD4-202ENST00000460308 KRTAP19-5Q3LI72 72 aa7.91□□□□□ -1.14
ABCD4-202ENST00000460308 RPS28P62857 69 aaKnown RBP7.9□□□□□ -1.14
ABCD4-202ENST00000460308 LCE3AQ5TA76 89 aa7.86□□□□□ -1.15
ABCD4-202ENST00000460308 KRTAP2-2Q9BYT5 123 aa7.86□□□□□ -1.15
ABCD4-202ENST00000460308 KRTAP2-1Q9BYU5 128 aa7.86□□□□□ -1.15
ABCD4-202ENST00000460308 A6NED7 52 aa7.84□□□□□ -1.15
ABCD4-202ENST00000460308 KRTAP19-3Q7Z4W3 81 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 171.3 ms