RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 DMBT1Q9UGM3 2413 aaPredicted RBP7.33□□□□□ -1.24
SCFD1-203ENST00000458591 KRTAP10-8P60410 259 aa7.32□□□□□ -1.24
SCFD1-203ENST00000458591 CRIPTQ9P021 101 aa7.32□□□□□ -1.24
SCFD1-203ENST00000458591 KRTAP17-1Q9BYP8 105 aa7.31□□□□□ -1.24
SCFD1-203ENST00000458591 KRTAP3-3Q9BYR6 98 aa7.3□□□□□ -1.24
SCFD1-203ENST00000458591 RYR3Q15413 4870 aa7.27□□□□□ -1.25
SCFD1-203ENST00000458591 LPAP08519 4548 aa7.26□□□□□ -1.25
SCFD1-203ENST00000458591 KRTAP21-3Q3LHN1 58 aa7.26□□□□□ -1.25
SCFD1-203ENST00000458591 KRTAP10-6P60371 365 aaPredicted RBP7.25□□□□□ -1.25
SCFD1-203ENST00000458591 KRTAP13-4Q3LI77 160 aa7.25□□□□□ -1.25
SCFD1-203ENST00000458591 Q5VSD8 79 aa7.25□□□□□ -1.25
SCFD1-203ENST00000458591 XP32Q5T750 250 aa7.23□□□□□ -1.25
SCFD1-203ENST00000458591 H3BS24 57 aa7.22□□□□□ -1.25
SCFD1-203ENST00000458591 RPL37P61927 97 aaKnown RBP7.22□□□□□ -1.25
SCFD1-203ENST00000458591 A0A0D9SG42 100 aa7.22□□□□□ -1.25
SCFD1-203ENST00000458591 RYR1P21817 5038 aa7.21□□□□□ -1.25
SCFD1-203ENST00000458591 ROMO1P60602 79 aa7.21□□□□□ -1.26
SCFD1-203ENST00000458591 KRTAP3-2Q9BYR7 98 aa7.19□□□□□ -1.26
SCFD1-203ENST00000458591 KIAA1109Q2LD37 5005 aa7.19□□□□□ -1.26
SCFD1-203ENST00000458591 LCE2DQ5TA82 110 aaPredicted RBP7.17□□□□□ -1.26
SCFD1-203ENST00000458591 P0C880 135 aa7.15□□□□□ -1.26
SCFD1-203ENST00000458591 S4R3F8 94 aa7.15□□□□□ -1.27
SCFD1-203ENST00000458591 LRP2P98164 4655 aa7.13□□□□□ -1.27
SCFD1-203ENST00000458591 MT1HL1P0DM35 61 aa7.08□□□□□ -1.28
SCFD1-203ENST00000458591 ABCA13Q86UQ4 5058 aa7.01□□□□□ -1.29
SCFD1-203ENST00000458591 EPPK1P58107 5090 aaKnown RBP7.01□□□□□ -1.29
SCFD1-203ENST00000458591 KRTAP12-2P59991 146 aa7□□□□□ -1.29
SCFD1-203ENST00000458591 C10orf95Q9H7T3 257 aa7□□□□□ -1.29
SCFD1-203ENST00000458591 TPRXLQ17RH7 258 aa6.98□□□□□ -1.29
SCFD1-203ENST00000458591 SPINT4Q6UDR6 99 aa6.96□□□□□ -1.29
SCFD1-203ENST00000458591 KRTAP12-1P59990 96 aa6.89□□□□□ -1.31
SCFD1-203ENST00000458591 KRTAP4-5Q9BYR2 181 aa6.87□□□□□ -1.31
SCFD1-203ENST00000458591 M0QZ58 72 aa6.84□□□□□ -1.31
SCFD1-203ENST00000458591 KRTAP15-1Q3LI76 137 aa6.75□□□□□ -1.33
SCFD1-203ENST00000458591 MUC17Q685J3 4493 aa6.75□□□□□ -1.33
SCFD1-203ENST00000458591 LORP23490 312 aaPredicted RBP6.73□□□□□ -1.33
SCFD1-203ENST00000458591 KRTAP4-1Q9BYQ7 146 aa6.71□□□□□ -1.34
SCFD1-203ENST00000458591 NDUFAF8A1L188 74 aa6.67□□□□□ -1.34
SCFD1-203ENST00000458591 R4GN34 69 aa6.65□□□□□ -1.35
SCFD1-203ENST00000458591 MUC2Q02817 5179 aa6.63□□□□□ -1.35
SCFD1-203ENST00000458591 HERC2O95714 4834 aa6.58□□□□□ -1.36
SCFD1-203ENST00000458591 SEC61BP60468 96 aaKnown RBP6.55□□□□□ -1.36
SCFD1-203ENST00000458591 KRTAP19-2Q3LHN2 52 aa6.52□□□□□ -1.37
SCFD1-203ENST00000458591 J3QL48 77 aa6.49□□□□□ -1.37
SCFD1-203ENST00000458591 PLAC4Q8WY50 150 aa6.42□□□□□ -1.38
SCFD1-203ENST00000458591 PCLOQ9Y6V0 5065 aa6.37□□□□□ -1.39
SCFD1-203ENST00000458591 HERC1Q15751 4861 aa6.36□□□□□ -1.39
SCFD1-203ENST00000458591 PP632Q6XCG6 107 aa6.35□□□□□ -1.39
SCFD1-203ENST00000458591 BIRC6Q9NR09 4857 aa6.35□□□□□ -1.39
SCFD1-203ENST00000458591 FLGP20930 4061 aaPredicted RBP6.34□□□□□ -1.39
SCFD1-203ENST00000458591 CAMK2N1Q7Z7J9 78 aa6.33□□□□□ -1.4
SCFD1-203ENST00000458591 FAT4Q6V0I7 4981 aa6.3□□□□□ -1.4
SCFD1-203ENST00000458591 HMCN2Q8NDA2 5059 aa6.22□□□□□ -1.41
SCFD1-203ENST00000458591 LUZP6Q538Z0 58 aa6.22□□□□□ -1.41
SCFD1-203ENST00000458591 TNP1P09430 55 aa6.11□□□□□ -1.43
SCFD1-203ENST00000458591 LCE2CQ5TA81 110 aa6.11□□□□□ -1.43
SCFD1-203ENST00000458591 RNF213Q63HN8 5207 aa6.11□□□□□ -1.43
SCFD1-203ENST00000458591 KRTAP23-1A1A580 65 aa6.08□□□□□ -1.44
SCFD1-203ENST00000458591 UBR4Q5T4S7 5183 aa6.03□□□□□ -1.44
SCFD1-203ENST00000458591 A0A0A0MQY5 61 aa6.02□□□□□ -1.45
SCFD1-203ENST00000458591 KRTAP19-1Q8IUB9 90 aa6□□□□□ -1.45
SCFD1-203ENST00000458591 M0R2T5 61 aa5.97□□□□□ -1.45
SCFD1-203ENST00000458591 SPRR2GQ9BYE4 73 aa5.94□□□□□ -1.46
SCFD1-203ENST00000458591 SPRR5A0A1B0GTR4 108 aa5.93□□□□□ -1.46
SCFD1-203ENST00000458591 MT1HP80294 61 aa5.92□□□□□ -1.46
SCFD1-203ENST00000458591 MT1FP04733 61 aa5.89□□□□□ -1.47
SCFD1-203ENST00000458591 MT2AP02795 61 aa5.85□□□□□ -1.47
SCFD1-203ENST00000458591 KRTAP10-10P60014 251 aa5.85□□□□□ -1.47
SCFD1-203ENST00000458591 LCE3AQ5TA76 89 aa5.84□□□□□ -1.48
SCFD1-203ENST00000458591 LCE2BO14633 110 aa5.8□□□□□ -1.48
SCFD1-203ENST00000458591 KRTAP9-8Q9BYQ0 159 aa5.8□□□□□ -1.48
SCFD1-203ENST00000458591 MT1BP07438 61 aa5.68□□□□□ -1.5
SCFD1-203ENST00000458591 KRTAP10-5P60370 271 aa5.66□□□□□ -1.5
SCFD1-203ENST00000458591 KRTAP19-8Q3LI54 63 aa5.65□□□□□ -1.5
SCFD1-203ENST00000458591 MT1XP80297 61 aa5.65□□□□□ -1.51
SCFD1-203ENST00000458591 KRTAP8-1Q8IUC2 63 aa5.59□□□□□ -1.51
SCFD1-203ENST00000458591 LCE2AQ5TA79 106 aaPredicted RBP5.58□□□□□ -1.52
SCFD1-203ENST00000458591 KRTAP10-7P60409 375 aaPredicted RBP5.56□□□□□ -1.52
SCFD1-203ENST00000458591 KRTAP9-3Q9BYQ3 159 aa5.53□□□□□ -1.52
SCFD1-203ENST00000458591 KRTAP10-12P60413 245 aa5.51□□□□□ -1.53
SCFD1-203ENST00000458591 USH2AO75445 5202 aa5.5□□□□□ -1.53
SCFD1-203ENST00000458591 KRTAP12-3P60328 96 aa5.49□□□□□ -1.53
SCFD1-203ENST00000458591 KMT2DO14686 5537 aa5.44□□□□□ -1.54
SCFD1-203ENST00000458591 PRO2289Q9P1D8 64 aa5.44□□□□□ -1.54
SCFD1-203ENST00000458591 INE1O15225 51 aa5.42□□□□□ -1.54
SCFD1-203ENST00000458591 KRTAP19-5Q3LI72 72 aa5.31□□□□□ -1.56
SCFD1-203ENST00000458591 KRTAP4-8A0A0G2JLE6 195 aa5.27□□□□□ -1.57
SCFD1-203ENST00000458591 KRTAP4-8Q9BYQ9 185 aa5.27□□□□□ -1.57
SCFD1-203ENST00000458591 LCE3CQ5T5A8 94 aa5.16□□□□□ -1.58
SCFD1-203ENST00000458591 LOC100996750A0A140TA64 210 aa5.16□□□□□ -1.58
SCFD1-203ENST00000458591 KRTAP4-6Q9BYQ5 205 aa5.16□□□□□ -1.58
SCFD1-203ENST00000458591 KRTAP4-7Q9BYR0 210 aa5.11□□□□□ -1.59
SCFD1-203ENST00000458591 KRTAP9-6A8MVA2 160 aa5.11□□□□□ -1.59
SCFD1-203ENST00000458591 KRTAP19-7Q3SYF9 63 aa5.04□□□□□ -1.6
SCFD1-203ENST00000458591 FSIP2Q5CZC0 6907 aa4.99□□□□□ -1.61
SCFD1-203ENST00000458591 SSPOA2VEC9 5147 aa4.97□□□□□ -1.61
SCFD1-203ENST00000458591 MT1LQ93083 61 aa4.87□□□□□ -1.63
SCFD1-203ENST00000458591 KRTAP19-4Q3LI73 84 aa4.87□□□□□ -1.63
SCFD1-203ENST00000458591 MT1EP04732 61 aa4.86□□□□□ -1.63
SCFD1-203ENST00000458591 KRTAP2-3P0C7H8 128 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms