RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 PRO2289Q9P1D8 64 aa4.41□□□□□ -1.7
HDLBP-227ENST00000458564 A0A087WVE0 104 aa4.4□□□□□ -1.71
HDLBP-227ENST00000458564 MT1XP80297 61 aa4.4□□□□□ -1.71
HDLBP-227ENST00000458564 BATFQ16520 125 aa4.4□□□□□ -1.71
HDLBP-227ENST00000458564 LCE1AQ5T7P2 110 aa4.4□□□□□ -1.71
HDLBP-227ENST00000458564 KRTAP2-2Q9BYT5 123 aa4.4□□□□□ -1.71
HDLBP-227ENST00000458564 KRTAP2-1Q9BYU5 128 aa4.4□□□□□ -1.71
HDLBP-227ENST00000458564 TAX1BP3O14907 124 aa4.39□□□□□ -1.71
HDLBP-227ENST00000458564 CYP4F30PQ9H0H9 118 aa4.39□□□□□ -1.71
HDLBP-227ENST00000458564 KRTAP8-1Q8IUC2 63 aa4.38□□□□□ -1.71
HDLBP-227ENST00000458564 PCP4L1A6NKN8 68 aa4.36□□□□□ -1.71
HDLBP-227ENST00000458564 KRTAP12-2P59991 146 aa4.36□□□□□ -1.71
HDLBP-227ENST00000458564 A8MUN3 132 aa4.34□□□□□ -1.71
HDLBP-227ENST00000458564 NDUFC1O43677 76 aa4.34□□□□□ -1.71
HDLBP-227ENST00000458564 LOC101927531A0A1B0GV80 90 aa4.33□□□□□ -1.72
HDLBP-227ENST00000458564 SPCS1Q9Y6A9 102 aa4.33□□□□□ -1.72
HDLBP-227ENST00000458564 TRAV22A0A0B4J277 110 aa4.32□□□□□ -1.72
HDLBP-227ENST00000458564 SPRR2DP22532 72 aa4.32□□□□□ -1.72
HDLBP-227ENST00000458564 PRO0461Q9UI25 63 aa4.31□□□□□ -1.72
HDLBP-227ENST00000458564 ADM2Q7Z4H4 148 aa4.3□□□□□ -1.72
HDLBP-227ENST00000458564 PLAC4Q8WY50 150 aa4.3□□□□□ -1.72
HDLBP-227ENST00000458564 K7EP34 96 aa4.28□□□□□ -1.72
HDLBP-227ENST00000458564 KRTAP4-8A0A0G2JLE6 195 aa4.25□□□□□ -1.73
HDLBP-227ENST00000458564 COL5A1-AS1Q5SY13 56 aa4.25□□□□□ -1.73
HDLBP-227ENST00000458564 KRTAP4-8Q9BYQ9 185 aa4.25□□□□□ -1.73
HDLBP-227ENST00000458564 ACYP1P07311 99 aa4.23□□□□□ -1.73
HDLBP-227ENST00000458564 R4GN34 69 aa4.23□□□□□ -1.73
HDLBP-227ENST00000458564 ATOX1O00244 68 aa4.22□□□□□ -1.73
HDLBP-227ENST00000458564 LCE3BQ5TA77 95 aa4.22□□□□□ -1.73
HDLBP-227ENST00000458564 UQCRQO14949 82 aa4.2□□□□□ -1.74
HDLBP-227ENST00000458564 H0Y9P7 68 aa4.19□□□□□ -1.74
HDLBP-227ENST00000458564 C20orf197Q8N268 126 aa4.19□□□□□ -1.74
HDLBP-227ENST00000458564 P0C880 135 aa4.18□□□□□ -1.74
HDLBP-227ENST00000458564 KRTAP10-12P60413 245 aa4.18□□□□□ -1.74
HDLBP-227ENST00000458564 SVIPQ8NHG7 77 aa4.18□□□□□ -1.74
HDLBP-227ENST00000458564 A0A1B0GV90 55 aa4.17□□□□□ -1.74
HDLBP-227ENST00000458564 M0QZ58 72 aa4.17□□□□□ -1.74
HDLBP-227ENST00000458564 KRTAP10-7P60409 375 aaPredicted RBP4.17□□□□□ -1.74
HDLBP-227ENST00000458564 GPR98Q8WXG9 6306 aa4.17□□□□□ -1.74
HDLBP-227ENST00000458564 ETDBQ3ZM63 59 aa4.14□□□□□ -1.75
HDLBP-227ENST00000458564 ATP5EP2Q5VTU8 51 aa4.14□□□□□ -1.75
HDLBP-227ENST00000458564 F8W1H4 67 aa4.13□□□□□ -1.75
HDLBP-227ENST00000458564 GTF2H5Q6ZYL4 71 aa4.12□□□□□ -1.75
HDLBP-227ENST00000458564 KRTAP3-2Q9BYR7 98 aa4.11□□□□□ -1.75
HDLBP-227ENST00000458564 DSTQ03001 7570 aaKnown RBP4.11□□□□□ -1.75
HDLBP-227ENST00000458564 HIST1H4AP62805 103 aaKnown RBP4.1□□□□□ -1.75
HDLBP-227ENST00000458564 LINC01554Q52M75 96 aa4.1□□□□□ -1.75
HDLBP-227ENST00000458564 LINC00208Q96KT6 92 aa4.1□□□□□ -1.75
HDLBP-227ENST00000458564 FAM240AA0A1B0GVK7 77 aa4.08□□□□□ -1.76
HDLBP-227ENST00000458564 MP68P56378 58 aa4.05□□□□□ -1.76
HDLBP-227ENST00000458564 DMAC1Q96GE9 116 aa4.05□□□□□ -1.76
HDLBP-227ENST00000458564 OCR1Q9BZK8 76 aa4.04□□□□□ -1.76
HDLBP-227ENST00000458564 LCE5AQ5TCM9 118 aa3.99□□□□□ -1.77
HDLBP-227ENST00000458564 H3BPC8 53 aa3.98□□□□□ -1.77
HDLBP-227ENST00000458564 LINC00643Q86TS7 51 aa3.98□□□□□ -1.77
HDLBP-227ENST00000458564 MT-ATP8P03928 68 aa3.97□□□□□ -1.77
HDLBP-227ENST00000458564 KRTAP4-9Q9BYQ8 210 aa3.97□□□□□ -1.77
HDLBP-227ENST00000458564 TRAV7A0A075B6U4 112 aa3.95□□□□□ -1.78
HDLBP-227ENST00000458564 KRTAP19-7Q3SYF9 63 aa3.94□□□□□ -1.78
HDLBP-227ENST00000458564 KRTAP19-3Q7Z4W3 81 aa3.93□□□□□ -1.78
HDLBP-227ENST00000458564 MT1EP04732 61 aa3.91□□□□□ -1.78
HDLBP-227ENST00000458564 LCE1DQ5T752 114 aa3.88□□□□□ -1.79
HDLBP-227ENST00000458564 SPTSSBQ8NFR3 76 aa3.88□□□□□ -1.79
HDLBP-227ENST00000458564 HMCN1Q96RW7 5635 aa3.88□□□□□ -1.79
HDLBP-227ENST00000458564 ACYP2P14621 99 aa3.87□□□□□ -1.79
HDLBP-227ENST00000458564 J3QR89 54 aa3.85□□□□□ -1.79
HDLBP-227ENST00000458564 K7ERU9 68 aa3.85□□□□□ -1.79
HDLBP-227ENST00000458564 CYSTM1Q9H1C7 97 aa3.84□□□□□ -1.79
HDLBP-227ENST00000458564 LCE4AQ5TA78 99 aa3.83□□□□□ -1.8
HDLBP-227ENST00000458564 CAMK2N1Q7Z7J9 78 aa3.83□□□□□ -1.8
HDLBP-227ENST00000458564 AHNAK2Q8IVF2 5795 aa3.81□□□□□ -1.8
HDLBP-227ENST00000458564 SCGB1A1P11684 91 aa3.81□□□□□ -1.8
HDLBP-227ENST00000458564 MT1GP13640 62 aa3.81□□□□□ -1.8
HDLBP-227ENST00000458564 KRTAP13-4Q3LI77 160 aa3.81□□□□□ -1.8
HDLBP-227ENST00000458564 CHKB-CPT1BH3BT56 60 aa3.78□□□□□ -1.8
HDLBP-227ENST00000458564 MT4P47944 62 aa3.78□□□□□ -1.8
HDLBP-227ENST00000458564 PP632Q6XCG6 107 aa3.77□□□□□ -1.81
HDLBP-227ENST00000458564 KRTAP5-10Q6L8G5 202 aa3.75□□□□□ -1.81
HDLBP-227ENST00000458564 KRTAP19-5Q3LI72 72 aa3.74□□□□□ -1.81
HDLBP-227ENST00000458564 A0A0D9SG42 100 aa3.73□□□□□ -1.81
HDLBP-227ENST00000458564 KRTAP5-4Q6L8H1 288 aa3.73□□□□□ -1.81
HDLBP-227ENST00000458564 MT1MQ8N339 61 aa3.73□□□□□ -1.81
HDLBP-227ENST00000458564 MT1LQ93083 61 aa3.69□□□□□ -1.82
HDLBP-227ENST00000458564 PCP4P48539 62 aa3.68□□□□□ -1.82
HDLBP-227ENST00000458564 SMIM20Q8N5G0 67 aa3.68□□□□□ -1.82
HDLBP-227ENST00000458564 KRTAP4-6Q9BYQ5 205 aa3.66□□□□□ -1.82
HDLBP-227ENST00000458564 SPANXA2-OT1Q8N9U9 137 aa3.65□□□□□ -1.83
HDLBP-227ENST00000458564 KRTAP5-7Q6L8G8 165 aa3.64□□□□□ -1.83
HDLBP-227ENST00000458564 KRTAP4-3Q9BYR4 195 aa3.62□□□□□ -1.83
HDLBP-227ENST00000458564 SNURFQ9Y675 71 aa3.61□□□□□ -1.83
HDLBP-227ENST00000458564 KRTAP5-3Q6L8H2 238 aa3.6□□□□□ -1.83
HDLBP-227ENST00000458564 KRTAP12-1P59990 96 aa3.59□□□□□ -1.83
HDLBP-227ENST00000458564 SPINT4Q6UDR6 99 aa3.59□□□□□ -1.83
HDLBP-227ENST00000458564 SPATA8Q6RVD6 105 aa3.58□□□□□ -1.84
HDLBP-227ENST00000458564 C10orf95Q9H7T3 257 aa3.57□□□□□ -1.84
HDLBP-227ENST00000458564 SEC61GP60059 68 aa3.56□□□□□ -1.84
HDLBP-227ENST00000458564 SERP2Q8N6R1 65 aa3.56□□□□□ -1.84
HDLBP-227ENST00000458564 SERP1Q9Y6X1 66 aa3.56□□□□□ -1.84
HDLBP-227ENST00000458564 COX7CP15954 63 aa3.54□□□□□ -1.84
HDLBP-227ENST00000458564 LCE3AQ5TA76 89 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms