RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 CSAG1Q6PB30 78 aa6.58□□□□□ -1.36
TIMP1-205ENST00000456754 DMAC1Q96GE9 116 aa6.58□□□□□ -1.36
TIMP1-205ENST00000456754 KRTAP9-3Q9BYQ3 159 aa6.57□□□□□ -1.36
TIMP1-205ENST00000456754 COX7CP15954 63 aa6.55□□□□□ -1.36
TIMP1-205ENST00000456754 CYSTM1Q9H1C7 97 aa6.54□□□□□ -1.36
TIMP1-205ENST00000456754 LCE2BO14633 110 aa6.51□□□□□ -1.37
TIMP1-205ENST00000456754 NDUFC1O43677 76 aa6.5□□□□□ -1.37
TIMP1-205ENST00000456754 FSIP2Q5CZC0 6907 aa6.5□□□□□ -1.37
TIMP1-205ENST00000456754 ANAPC13Q9BS18 74 aa6.49□□□□□ -1.37
TIMP1-205ENST00000456754 CCDC179H3BU77 68 aa6.43□□□□□ -1.38
TIMP1-205ENST00000456754 ACYP2P14621 99 aa6.43□□□□□ -1.38
TIMP1-205ENST00000456754 SPANXA2-OT1Q8N9U9 137 aa6.43□□□□□ -1.38
TIMP1-205ENST00000456754 H7BZZ5 65 aa6.41□□□□□ -1.38
TIMP1-205ENST00000456754 USH2AO75445 5202 aa6.41□□□□□ -1.38
TIMP1-205ENST00000456754 KRTAP19-1Q8IUB9 90 aa6.39□□□□□ -1.39
TIMP1-205ENST00000456754 CRCT1Q9UGL9 99 aa6.39□□□□□ -1.39
TIMP1-205ENST00000456754 ADM2Q7Z4H4 148 aa6.38□□□□□ -1.39
TIMP1-205ENST00000456754 KRTAP9-6A0A140TA67 174 aa6.37□□□□□ -1.39
TIMP1-205ENST00000456754 H0YAA0 97 aa6.34□□□□□ -1.39
TIMP1-205ENST00000456754 CHKB-CPT1BH3BT56 60 aa6.33□□□□□ -1.4
TIMP1-205ENST00000456754 P0C880 135 aa6.32□□□□□ -1.4
TIMP1-205ENST00000456754 KRTAP3-2Q9BYR7 98 aa6.32□□□□□ -1.4
TIMP1-205ENST00000456754 COA5Q86WW8 74 aa6.31□□□□□ -1.4
TIMP1-205ENST00000456754 SSPOA2VEC9 5147 aa6.31□□□□□ -1.4
TIMP1-205ENST00000456754 SPRR2GQ9BYE4 73 aa6.29□□□□□ -1.4
TIMP1-205ENST00000456754 MT1BP07438 61 aa6.24□□□□□ -1.41
TIMP1-205ENST00000456754 SPTSSBQ8NFR3 76 aa6.24□□□□□ -1.41
TIMP1-205ENST00000456754 KRTAP19-8Q3LI54 63 aa6.22□□□□□ -1.41
TIMP1-205ENST00000456754 CRIPTQ9P021 101 aa6.22□□□□□ -1.41
TIMP1-205ENST00000456754 Q5VV11 94 aa6.16□□□□□ -1.42
TIMP1-205ENST00000456754 KRTAP19-6Q3LI70 58 aa6.15□□□□□ -1.42
TIMP1-205ENST00000456754 M0QZ58 72 aa6.14□□□□□ -1.43
TIMP1-205ENST00000456754 R4GN34 69 aa6.13□□□□□ -1.43
TIMP1-205ENST00000456754 FCGBPQ9Y6R7 5405 aaPredicted RBP6.09□□□□□ -1.43
TIMP1-205ENST00000456754 TMEM258P61165 79 aa6.09□□□□□ -1.43
TIMP1-205ENST00000456754 ATP5EP56381 51 aaPredicted RBP6.08□□□□□ -1.44
TIMP1-205ENST00000456754 LINC01554Q52M75 96 aa6.07□□□□□ -1.44
TIMP1-205ENST00000456754 KRTAP13-4Q3LI77 160 aa6.06□□□□□ -1.44
TIMP1-205ENST00000456754 PCP4P48539 62 aa5.98□□□□□ -1.45
TIMP1-205ENST00000456754 KRTAP10-5P60370 271 aa5.98□□□□□ -1.45
TIMP1-205ENST00000456754 A6NN06 94 aa5.97□□□□□ -1.45
TIMP1-205ENST00000456754 SERP1Q9Y6X1 66 aa5.97□□□□□ -1.45
TIMP1-205ENST00000456754 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.96□□□□□ -1.46
TIMP1-205ENST00000456754 SEC61GP60059 68 aa5.96□□□□□ -1.46
TIMP1-205ENST00000456754 PLAC4Q8WY50 150 aa5.94□□□□□ -1.46
TIMP1-205ENST00000456754 A0A1B0GU69 56 aa5.93□□□□□ -1.46
TIMP1-205ENST00000456754 SPATA8Q6RVD6 105 aa5.93□□□□□ -1.46
TIMP1-205ENST00000456754 MT1XP80297 61 aa5.92□□□□□ -1.46
TIMP1-205ENST00000456754 A0A1B0GU33 70 aa5.9□□□□□ -1.46
TIMP1-205ENST00000456754 MACF1Q9UPN3 7388 aaKnown RBP5.9□□□□□ -1.47
TIMP1-205ENST00000456754 A0A0D9SG42 100 aa5.87□□□□□ -1.47
TIMP1-205ENST00000456754 LINC01558Q9Y6Z2 57 aa5.87□□□□□ -1.47
TIMP1-205ENST00000456754 SYNE2Q8WXH0 6885 aaKnown RBP5.85□□□□□ -1.47
TIMP1-205ENST00000456754 A8MU10 97 aa5.8□□□□□ -1.48
TIMP1-205ENST00000456754 PRR15LQ9BU68 103 aa5.78□□□□□ -1.48
TIMP1-205ENST00000456754 KRTAP9-7A8MTY7 169 aa5.77□□□□□ -1.49
TIMP1-205ENST00000456754 PRO2289Q9P1D8 64 aa5.77□□□□□ -1.49
TIMP1-205ENST00000456754 KRTAP12-1P59990 96 aa5.74□□□□□ -1.49
TIMP1-205ENST00000456754 KRTAP12-2P59991 146 aa5.73□□□□□ -1.49
TIMP1-205ENST00000456754 SPINT4Q6UDR6 99 aa5.73□□□□□ -1.49
TIMP1-205ENST00000456754 PSPHP1O15172 72 aa5.7□□□□□ -1.5
TIMP1-205ENST00000456754 SMIM26A0A096LP01 95 aa5.69□□□□□ -1.5
TIMP1-205ENST00000456754 KRTAP10-7P60409 375 aaPredicted RBP5.69□□□□□ -1.5
TIMP1-205ENST00000456754 CAMK2N1Q7Z7J9 78 aa5.69□□□□□ -1.5
TIMP1-205ENST00000456754 Q1T7F1 81 aa5.68□□□□□ -1.5
TIMP1-205ENST00000456754 RPS28P62857 69 aaKnown RBP5.64□□□□□ -1.51
TIMP1-205ENST00000456754 KMT2DO14686 5537 aa5.62□□□□□ -1.51
TIMP1-205ENST00000456754 UQCR11O14957 56 aa5.62□□□□□ -1.51
TIMP1-205ENST00000456754 KRTAP6-3Q3LI67 103 aa5.62□□□□□ -1.51
TIMP1-205ENST00000456754 V9GYY9 64 aa5.62□□□□□ -1.51
TIMP1-205ENST00000456754 KRTAP4-8A0A0G2JLE6 195 aa5.61□□□□□ -1.51
TIMP1-205ENST00000456754 KRTAP4-8Q9BYQ9 185 aa5.61□□□□□ -1.51
TIMP1-205ENST00000456754 KRTAP10-12P60413 245 aa5.59□□□□□ -1.51
TIMP1-205ENST00000456754 MIR22HGQ0VDD5 57 aa5.57□□□□□ -1.52
TIMP1-205ENST00000456754 KRTAP5-9P26371 169 aa5.5□□□□□ -1.53
TIMP1-205ENST00000456754 KRTAP8-1Q8IUC2 63 aa5.5□□□□□ -1.53
TIMP1-205ENST00000456754 C10orf95Q9H7T3 257 aa5.49□□□□□ -1.53
TIMP1-205ENST00000456754 A6NED7 52 aa5.47□□□□□ -1.53
TIMP1-205ENST00000456754 NEBP20929 6669 aa5.45□□□□□ -1.54
TIMP1-205ENST00000456754 SPRR2FQ96RM1 72 aa5.44□□□□□ -1.54
TIMP1-205ENST00000456754 MUC12Q9UKN1 5478 aa5.41□□□□□ -1.54
TIMP1-205ENST00000456754 TNP1P09430 55 aa5.31□□□□□ -1.56
TIMP1-205ENST00000456754 K7ERS5 55 aa5.3□□□□□ -1.56
TIMP1-205ENST00000456754 SPRR2EP22531 72 aa5.29□□□□□ -1.56
TIMP1-205ENST00000456754 SPRR2BP35325 72 aa5.29□□□□□ -1.56
TIMP1-205ENST00000456754 SPRR2AP35326 72 aa5.29□□□□□ -1.56
TIMP1-205ENST00000456754 KRTAP19-7Q3SYF9 63 aa5.29□□□□□ -1.56
TIMP1-205ENST00000456754 LCE1AQ5T7P2 110 aa5.28□□□□□ -1.56
TIMP1-205ENST00000456754 LCE3AQ5TA76 89 aa5.28□□□□□ -1.56
TIMP1-205ENST00000456754 CDC42SE1Q9NRR8 79 aa5.27□□□□□ -1.57
TIMP1-205ENST00000456754 MDN1Q9NU22 5596 aa5.26□□□□□ -1.57
TIMP1-205ENST00000456754 KRTAP19-5Q3LI72 72 aa5.25□□□□□ -1.57
TIMP1-205ENST00000456754 MT1EP04732 61 aa5.22□□□□□ -1.57
TIMP1-205ENST00000456754 KRTAP25-1Q3LHN0 102 aa5.14□□□□□ -1.59
TIMP1-205ENST00000456754 SPRR2DP22532 72 aa5.1□□□□□ -1.59
TIMP1-205ENST00000456754 ROMO1P60602 79 aa5.09□□□□□ -1.59
TIMP1-205ENST00000456754 KRTAP20-1Q3LI63 56 aa5.08□□□□□ -1.6
TIMP1-205ENST00000456754 KRTAP19-3Q7Z4W3 81 aa5.07□□□□□ -1.6
TIMP1-205ENST00000456754 BRK1Q8WUW1 75 aa5.06□□□□□ -1.6
TIMP1-205ENST00000456754 LCE5AQ5TCM9 118 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms