RNA–Protein interactions for RNA: ENST00000456009.4

CCDC144A-210, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 5 BASIC

Gene CCDC144A, Length 2,306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-210ENST00000456009 RYR3Q15413 4870 aa9.15□□□□□ -0.94
CCDC144A-210ENST00000456009 H1FX-AS1Q4G0G2 97 aa9.11□□□□□ -0.95
CCDC144A-210ENST00000456009 RPL37P61927 97 aaKnown RBP9.09□□□□□ -0.95
CCDC144A-210ENST00000456009 XP32Q5T750 250 aa9.09□□□□□ -0.95
CCDC144A-210ENST00000456009 RYR1P21817 5038 aa9.07□□□□□ -0.96
CCDC144A-210ENST00000456009 KRTAP3-3Q9BYR6 98 aa9.05□□□□□ -0.96
CCDC144A-210ENST00000456009 KIAA1109Q2LD37 5005 aa9.02□□□□□ -0.97
CCDC144A-210ENST00000456009 CSAG1Q6PB30 78 aa9□□□□□ -0.97
CCDC144A-210ENST00000456009 MT1HL1P0DM35 61 aa8.99□□□□□ -0.97
CCDC144A-210ENST00000456009 LPAP08519 4548 aa8.97□□□□□ -0.97
CCDC144A-210ENST00000456009 KRTAP10-6P60371 365 aaPredicted RBP8.95□□□□□ -0.98
CCDC144A-210ENST00000456009 KRTAP3-2Q9BYR7 98 aa8.89□□□□□ -0.99
CCDC144A-210ENST00000456009 S4R3F8 94 aa8.89□□□□□ -0.99
CCDC144A-210ENST00000456009 LINC01554Q52M75 96 aa8.88□□□□□ -0.99
CCDC144A-210ENST00000456009 KRTAP13-4Q3LI77 160 aa8.88□□□□□ -0.99
CCDC144A-210ENST00000456009 LRP2P98164 4655 aa8.87□□□□□ -0.99
CCDC144A-210ENST00000456009 EPPK1P58107 5090 aaKnown RBP8.81□□□□□ -1
CCDC144A-210ENST00000456009 P0C880 135 aa8.8□□□□□ -1
CCDC144A-210ENST00000456009 A0A0D9SG42 100 aa8.79□□□□□ -1
CCDC144A-210ENST00000456009 K7ERS5 55 aa8.76□□□□□ -1.01
CCDC144A-210ENST00000456009 CRIPTQ9P021 101 aa8.75□□□□□ -1.01
CCDC144A-210ENST00000456009 ABCA13Q86UQ4 5058 aa8.73□□□□□ -1.01
CCDC144A-210ENST00000456009 KRTAP25-1Q3LHN0 102 aa8.72□□□□□ -1.01
CCDC144A-210ENST00000456009 TPRXLQ17RH7 258 aa8.71□□□□□ -1.01
CCDC144A-210ENST00000456009 KRTAP4-5Q9BYR2 181 aa8.7□□□□□ -1.02
CCDC144A-210ENST00000456009 ROMO1P60602 79 aa8.62□□□□□ -1.03
CCDC144A-210ENST00000456009 KRTAP12-2P59991 146 aa8.57□□□□□ -1.04
CCDC144A-210ENST00000456009 KRTAP12-1P59990 96 aa8.49□□□□□ -1.05
CCDC144A-210ENST00000456009 SPINT4Q6UDR6 99 aa8.47□□□□□ -1.05
CCDC144A-210ENST00000456009 H3BS24 57 aa8.42□□□□□ -1.06
CCDC144A-210ENST00000456009 MUC17Q685J3 4493 aa8.42□□□□□ -1.06
CCDC144A-210ENST00000456009 C10orf95Q9H7T3 257 aa8.42□□□□□ -1.06
CCDC144A-210ENST00000456009 KRTAP4-1Q9BYQ7 146 aa8.41□□□□□ -1.06
CCDC144A-210ENST00000456009 M0QZ58 72 aa8.41□□□□□ -1.06
CCDC144A-210ENST00000456009 SEC61BP60468 96 aaKnown RBP8.36□□□□□ -1.07
CCDC144A-210ENST00000456009 HERC2O95714 4834 aa8.31□□□□□ -1.08
CCDC144A-210ENST00000456009 J3QL48 77 aa8.3□□□□□ -1.08
CCDC144A-210ENST00000456009 LORP23490 312 aaPredicted RBP8.29□□□□□ -1.08
CCDC144A-210ENST00000456009 R4GN34 69 aa8.26□□□□□ -1.09
CCDC144A-210ENST00000456009 MUC2Q02817 5179 aa8.23□□□□□ -1.09
CCDC144A-210ENST00000456009 KRTAP19-2Q3LHN2 52 aa8.23□□□□□ -1.09
CCDC144A-210ENST00000456009 BIRC6Q9NR09 4857 aa7.97□□□□□ -1.13
CCDC144A-210ENST00000456009 HERC1Q15751 4861 aa7.97□□□□□ -1.13
CCDC144A-210ENST00000456009 KRTAP15-1Q3LI76 137 aa7.97□□□□□ -1.13
CCDC144A-210ENST00000456009 FLGP20930 4061 aaPredicted RBP7.96□□□□□ -1.13
CCDC144A-210ENST00000456009 PCLOQ9Y6V0 5065 aa7.89□□□□□ -1.15
CCDC144A-210ENST00000456009 CAMK2N1Q7Z7J9 78 aa7.83□□□□□ -1.16
CCDC144A-210ENST00000456009 HMCN2Q8NDA2 5059 aa7.82□□□□□ -1.16
CCDC144A-210ENST00000456009 FAT4Q6V0I7 4981 aa7.81□□□□□ -1.16
CCDC144A-210ENST00000456009 NDUFAF8A1L188 74 aa7.75□□□□□ -1.17
CCDC144A-210ENST00000456009 LCE2CQ5TA81 110 aa7.75□□□□□ -1.17
CCDC144A-210ENST00000456009 PLAC4Q8WY50 150 aa7.64□□□□□ -1.19
CCDC144A-210ENST00000456009 PP632Q6XCG6 107 aa7.58□□□□□ -1.2
CCDC144A-210ENST00000456009 RNF213Q63HN8 5207 aa7.58□□□□□ -1.2
CCDC144A-210ENST00000456009 KRTAP19-1Q8IUB9 90 aa7.54□□□□□ -1.2
CCDC144A-210ENST00000456009 UBR4Q5T4S7 5183 aa7.54□□□□□ -1.2
CCDC144A-210ENST00000456009 M0R2T5 61 aa7.52□□□□□ -1.2
CCDC144A-210ENST00000456009 MT1HP80294 61 aa7.52□□□□□ -1.21
CCDC144A-210ENST00000456009 SPRR2GQ9BYE4 73 aa7.52□□□□□ -1.21
CCDC144A-210ENST00000456009 TNP1P09430 55 aa7.51□□□□□ -1.21
CCDC144A-210ENST00000456009 MT1FP04733 61 aa7.41□□□□□ -1.22
CCDC144A-210ENST00000456009 MT2AP02795 61 aa7.39□□□□□ -1.23
CCDC144A-210ENST00000456009 KRTAP10-10P60014 251 aa7.37□□□□□ -1.23
CCDC144A-210ENST00000456009 KRTAP9-8Q9BYQ0 159 aa7.36□□□□□ -1.23
CCDC144A-210ENST00000456009 KRTAP23-1A1A580 65 aa7.34□□□□□ -1.23
CCDC144A-210ENST00000456009 LUZP6Q538Z0 58 aa7.21□□□□□ -1.26
CCDC144A-210ENST00000456009 LCE3AQ5TA76 89 aa7.19□□□□□ -1.26
CCDC144A-210ENST00000456009 KRTAP19-8Q3LI54 63 aa7.18□□□□□ -1.26
CCDC144A-210ENST00000456009 MT1BP07438 61 aa7.15□□□□□ -1.27
CCDC144A-210ENST00000456009 A0A0A0MQY5 61 aa7.13□□□□□ -1.27
CCDC144A-210ENST00000456009 SPRR5A0A1B0GTR4 108 aa7.12□□□□□ -1.27
CCDC144A-210ENST00000456009 KRTAP10-5P60370 271 aa7.1□□□□□ -1.27
CCDC144A-210ENST00000456009 MT1XP80297 61 aa7.09□□□□□ -1.28
CCDC144A-210ENST00000456009 KRTAP9-3Q9BYQ3 159 aa7.04□□□□□ -1.28
CCDC144A-210ENST00000456009 KRTAP8-1Q8IUC2 63 aa6.96□□□□□ -1.29
CCDC144A-210ENST00000456009 KRTAP10-7P60409 375 aaPredicted RBP6.92□□□□□ -1.3
CCDC144A-210ENST00000456009 KRTAP10-12P60413 245 aa6.89□□□□□ -1.31
CCDC144A-210ENST00000456009 KRTAP12-3P60328 96 aa6.82□□□□□ -1.32
CCDC144A-210ENST00000456009 LCE2BO14633 110 aa6.8□□□□□ -1.32
CCDC144A-210ENST00000456009 USH2AO75445 5202 aa6.78□□□□□ -1.32
CCDC144A-210ENST00000456009 PRO2289Q9P1D8 64 aa6.73□□□□□ -1.33
CCDC144A-210ENST00000456009 LCE2AQ5TA79 106 aaPredicted RBP6.66□□□□□ -1.34
CCDC144A-210ENST00000456009 KMT2DO14686 5537 aa6.65□□□□□ -1.35
CCDC144A-210ENST00000456009 KRTAP19-5Q3LI72 72 aa6.6□□□□□ -1.35
CCDC144A-210ENST00000456009 KRTAP4-8A0A0G2JLE6 195 aa6.54□□□□□ -1.36
CCDC144A-210ENST00000456009 KRTAP4-8Q9BYQ9 185 aa6.54□□□□□ -1.36
CCDC144A-210ENST00000456009 LCE3CQ5T5A8 94 aa6.43□□□□□ -1.38
CCDC144A-210ENST00000456009 KRTAP19-7Q3SYF9 63 aa6.32□□□□□ -1.4
CCDC144A-210ENST00000456009 KRTAP9-6A8MVA2 160 aa6.27□□□□□ -1.41
CCDC144A-210ENST00000456009 KRTAP4-7Q9BYR0 210 aa6.25□□□□□ -1.41
CCDC144A-210ENST00000456009 SSPOA2VEC9 5147 aa6.2□□□□□ -1.42
CCDC144A-210ENST00000456009 FSIP2Q5CZC0 6907 aa6.14□□□□□ -1.43
CCDC144A-210ENST00000456009 INE1O15225 51 aa6.13□□□□□ -1.43
CCDC144A-210ENST00000456009 MT1EP04732 61 aa6.11□□□□□ -1.43
CCDC144A-210ENST00000456009 MT1LQ93083 61 aa6.11□□□□□ -1.43
CCDC144A-210ENST00000456009 KRTAP19-6Q3LI70 58 aa6.04□□□□□ -1.44
CCDC144A-210ENST00000456009 KRTAP2-3P0C7H8 128 aa5.94□□□□□ -1.46
CCDC144A-210ENST00000456009 KRTAP2-4Q9BYR9 128 aa5.94□□□□□ -1.46
CCDC144A-210ENST00000456009 KRTAP2-1Q9BYU5 128 aa5.94□□□□□ -1.46
CCDC144A-210ENST00000456009 KRTAP19-4Q3LI73 84 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms