RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 A0A087WVE0 104 aa9.63□□□□□ -0.87
PTPRA-208ENST00000455631 KRTAP4-8A0A0G2JLE6 195 aa9.59□□□□□ -0.87
PTPRA-208ENST00000455631 A8MUN3 132 aa9.59□□□□□ -0.87
PTPRA-208ENST00000455631 KRTAP4-8Q9BYQ9 185 aa9.59□□□□□ -0.87
PTPRA-208ENST00000455631 PLAC4Q8WY50 150 aa9.56□□□□□ -0.88
PTPRA-208ENST00000455631 M0R143 59 aa9.53□□□□□ -0.88
PTPRA-208ENST00000455631 H0YAA0 97 aa9.52□□□□□ -0.89
PTPRA-208ENST00000455631 H3BT86 120 aa9.5□□□□□ -0.89
PTPRA-208ENST00000455631 TSTD3H0UI37 97 aa9.49□□□□□ -0.89
PTPRA-208ENST00000455631 ADM2Q7Z4H4 148 aa9.46□□□□□ -0.9
PTPRA-208ENST00000455631 TP53AIP1Q9HCN2 124 aa9.46□□□□□ -0.9
PTPRA-208ENST00000455631 NDUFC1O43677 76 aa9.44□□□□□ -0.9
PTPRA-208ENST00000455631 CYP4F30PQ9H0H9 118 aa9.43□□□□□ -0.9
PTPRA-208ENST00000455631 UBL5Q9BZL1 73 aa9.36□□□□□ -0.91
PTPRA-208ENST00000455631 K7EP34 96 aa9.34□□□□□ -0.91
PTPRA-208ENST00000455631 DSTQ03001 7570 aaKnown RBP9.32□□□□□ -0.92
PTPRA-208ENST00000455631 KRTAP10-7P60409 375 aaPredicted RBP9.3□□□□□ -0.92
PTPRA-208ENST00000455631 R4GN34 69 aa9.28□□□□□ -0.92
PTPRA-208ENST00000455631 LOC101927531A0A1B0GV80 90 aa9.24□□□□□ -0.93
PTPRA-208ENST00000455631 KRTAP10-12P60413 245 aa9.23□□□□□ -0.93
PTPRA-208ENST00000455631 BATFQ16520 125 aa9.23□□□□□ -0.93
PTPRA-208ENST00000455631 KRTAP4-9Q9BYQ8 210 aa9.22□□□□□ -0.93
PTPRA-208ENST00000455631 TRAV22A0A0B4J277 110 aa9.21□□□□□ -0.94
PTPRA-208ENST00000455631 A0A1W2PPM0 123 aa9.18□□□□□ -0.94
PTPRA-208ENST00000455631 C9orf118A6NHY6 69 aa9.18□□□□□ -0.94
PTPRA-208ENST00000455631 M0QZ58 72 aa9.18□□□□□ -0.94
PTPRA-208ENST00000455631 ACYP1P07311 99 aa9.15□□□□□ -0.94
PTPRA-208ENST00000455631 LOC105371267A0A1B0GV96 52 aa9.13□□□□□ -0.95
PTPRA-208ENST00000455631 P0C880 135 aa9.12□□□□□ -0.95
PTPRA-208ENST00000455631 LINC01554Q52M75 96 aa9.12□□□□□ -0.95
PTPRA-208ENST00000455631 TMA7Q9Y2S6 64 aaKnown RBP9.12□□□□□ -0.95
PTPRA-208ENST00000455631 SPCS1Q9Y6A9 102 aa9.11□□□□□ -0.95
PTPRA-208ENST00000455631 C20orf197Q8N268 126 aa9.09□□□□□ -0.95
PTPRA-208ENST00000455631 TAX1BP3O14907 124 aa9.07□□□□□ -0.96
PTPRA-208ENST00000455631 H0Y9P7 68 aa8.96□□□□□ -0.98
PTPRA-208ENST00000455631 ATOX1O00244 68 aa8.94□□□□□ -0.98
PTPRA-208ENST00000455631 LCE1DQ5T752 114 aa8.9□□□□□ -0.98
PTPRA-208ENST00000455631 UQCRQO14949 82 aa8.89□□□□□ -0.99
PTPRA-208ENST00000455631 LCE5AQ5TCM9 118 aa8.89□□□□□ -0.99
PTPRA-208ENST00000455631 PRO0461Q9UI25 63 aa8.88□□□□□ -0.99
PTPRA-208ENST00000455631 SMIM6P0DI80 62 aa8.82□□□□□ -1
PTPRA-208ENST00000455631 KRTAP19-3Q7Z4W3 81 aa8.77□□□□□ -1.01
PTPRA-208ENST00000455631 MT-ATP8P03928 68 aa8.76□□□□□ -1.01
PTPRA-208ENST00000455631 LINC00208Q96KT6 92 aa8.74□□□□□ -1.01
PTPRA-208ENST00000455631 MT4P47944 62 aa8.73□□□□□ -1.01
PTPRA-208ENST00000455631 KRTAP19-7Q3SYF9 63 aa8.71□□□□□ -1.02
PTPRA-208ENST00000455631 HMCN1Q96RW7 5635 aa8.7□□□□□ -1.02
PTPRA-208ENST00000455631 MT1EP04732 61 aa8.69□□□□□ -1.02
PTPRA-208ENST00000455631 HIST1H4AP62805 103 aaKnown RBP8.68□□□□□ -1.02
PTPRA-208ENST00000455631 PCP4L1A6NKN8 68 aa8.67□□□□□ -1.02
PTPRA-208ENST00000455631 LCE4AQ5TA78 99 aa8.66□□□□□ -1.02
PTPRA-208ENST00000455631 AHNAK2Q8IVF2 5795 aa8.65□□□□□ -1.02
PTPRA-208ENST00000455631 CYSTM1Q9H1C7 97 aa8.65□□□□□ -1.02
PTPRA-208ENST00000455631 KRTAP5-10Q6L8G5 202 aa8.63□□□□□ -1.03
PTPRA-208ENST00000455631 ETDBQ3ZM63 59 aa8.59□□□□□ -1.03
PTPRA-208ENST00000455631 MP68P56378 58 aa8.57□□□□□ -1.04
PTPRA-208ENST00000455631 ATP5EP2Q5VTU8 51 aa8.57□□□□□ -1.04
PTPRA-208ENST00000455631 DMAC1Q96GE9 116 aa8.57□□□□□ -1.04
PTPRA-208ENST00000455631 LOC100996750A0A140TA64 210 aa8.51□□□□□ -1.05
PTPRA-208ENST00000455631 KRTAP4-6Q9BYQ5 205 aa8.51□□□□□ -1.05
PTPRA-208ENST00000455631 COL5A1-AS1Q5SY13 56 aa8.49□□□□□ -1.05
PTPRA-208ENST00000455631 F8W1H4 67 aa8.48□□□□□ -1.05
PTPRA-208ENST00000455631 MT1GP13640 62 aa8.46□□□□□ -1.06
PTPRA-208ENST00000455631 GTF2H5Q6ZYL4 71 aa8.44□□□□□ -1.06
PTPRA-208ENST00000455631 CAMK2N1Q7Z7J9 78 aa8.44□□□□□ -1.06
PTPRA-208ENST00000455631 PP632Q6XCG6 107 aa8.43□□□□□ -1.06
PTPRA-208ENST00000455631 OCR1Q9BZK8 76 aa8.42□□□□□ -1.06
PTPRA-208ENST00000455631 KRTAP5-7Q6L8G8 165 aa8.39□□□□□ -1.07
PTPRA-208ENST00000455631 TRAV7A0A075B6U4 112 aa8.35□□□□□ -1.07
PTPRA-208ENST00000455631 KRTAP5-4Q6L8H1 288 aa8.35□□□□□ -1.07
PTPRA-208ENST00000455631 FAM240AA0A1B0GVK7 77 aa8.33□□□□□ -1.08
PTPRA-208ENST00000455631 MT1MQ8N339 61 aa8.33□□□□□ -1.08
PTPRA-208ENST00000455631 KRTAP19-5Q3LI72 72 aa8.32□□□□□ -1.08
PTPRA-208ENST00000455631 H3BPC8 53 aa8.3□□□□□ -1.08
PTPRA-208ENST00000455631 SPTSSBQ8NFR3 76 aa8.28□□□□□ -1.08
PTPRA-208ENST00000455631 KRTAP5-3Q6L8H2 238 aa8.26□□□□□ -1.09
PTPRA-208ENST00000455631 A0A1B0GV90 55 aa8.25□□□□□ -1.09
PTPRA-208ENST00000455631 A0A0D9SG42 100 aa8.24□□□□□ -1.09
PTPRA-208ENST00000455631 ACYP2P14621 99 aa8.21□□□□□ -1.1
PTPRA-208ENST00000455631 KRTAP13-4Q3LI77 160 aa8.21□□□□□ -1.1
PTPRA-208ENST00000455631 LINC00643Q86TS7 51 aa8.19□□□□□ -1.1
PTPRA-208ENST00000455631 KRTAP4-3Q9BYR4 195 aa8.19□□□□□ -1.1
PTPRA-208ENST00000455631 MT1LQ93083 61 aa8.18□□□□□ -1.1
PTPRA-208ENST00000455631 SPRR5A0A1B0GTR4 108 aa8.13□□□□□ -1.11
PTPRA-208ENST00000455631 CHKB-CPT1BH3BT56 60 aa8.1□□□□□ -1.11
PTPRA-208ENST00000455631 PCP4P48539 62 aa8.03□□□□□ -1.12
PTPRA-208ENST00000455631 SCGB1A1P11684 91 aa7.98□□□□□ -1.13
PTPRA-208ENST00000455631 KRTAP20-2Q3LI61 65 aa7.96□□□□□ -1.14
PTPRA-208ENST00000455631 K7ERU9 68 aa7.88□□□□□ -1.15
PTPRA-208ENST00000455631 SPINT4Q6UDR6 99 aa7.85□□□□□ -1.15
PTPRA-208ENST00000455631 C10orf95Q9H7T3 257 aa7.85□□□□□ -1.15
PTPRA-208ENST00000455631 LCE3AQ5TA76 89 aa7.77□□□□□ -1.17
PTPRA-208ENST00000455631 KRTAP4-7Q9BYR0 210 aa7.77□□□□□ -1.17
PTPRA-208ENST00000455631 SPATA8Q6RVD6 105 aa7.72□□□□□ -1.17
PTPRA-208ENST00000455631 J3QR89 54 aa7.71□□□□□ -1.18
PTPRA-208ENST00000455631 KRTAP12-4P60329 112 aa7.69□□□□□ -1.18
PTPRA-208ENST00000455631 KRTAP5-5Q701N2 237 aaPredicted RBP7.69□□□□□ -1.18
PTPRA-208ENST00000455631 KRTAP12-1P59990 96 aa7.68□□□□□ -1.18
PTPRA-208ENST00000455631 SVIPQ8NHG7 77 aa7.64□□□□□ -1.19
PTPRA-208ENST00000455631 SEC61GP60059 68 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms