RNA–Protein interactions for RNA: ENST00000453163.6

PDCD2-204, Transcript of programmed cell death 2, humanhuman

TSL 1 (best) BASIC

Gene PDCD2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-204ENST00000453163 KRTAP3-1Q9BYR8 98 aa10.71□□□□□ -0.69
PDCD2-204ENST00000453163 LINC01554Q52M75 96 aa10.7□□□□□ -0.7
PDCD2-204ENST00000453163 MT1HL1P0DM35 61 aa10.69□□□□□ -0.7
PDCD2-204ENST00000453163 XP32Q5T750 250 aa10.62□□□□□ -0.71
PDCD2-204ENST00000453163 RPL37P61927 97 aaKnown RBP10.62□□□□□ -0.71
PDCD2-204ENST00000453163 CSAG1Q6PB30 78 aa10.58□□□□□ -0.72
PDCD2-204ENST00000453163 COX6B2Q6YFQ2 88 aa10.57□□□□□ -0.72
PDCD2-204ENST00000453163 H0YAA0 97 aa10.51□□□□□ -0.73
PDCD2-204ENST00000453163 KRTAP4-5Q9BYR2 181 aa10.45□□□□□ -0.74
PDCD2-204ENST00000453163 ABCA13Q86UQ4 5058 aa10.41□□□□□ -0.74
PDCD2-204ENST00000453163 LRP2P98164 4655 aa10.41□□□□□ -0.74
PDCD2-204ENST00000453163 LPAP08519 4548 aa10.4□□□□□ -0.74
PDCD2-204ENST00000453163 A0A1B0GU33 70 aa10.4□□□□□ -0.74
PDCD2-204ENST00000453163 H1FX-AS1Q4G0G2 97 aa10.37□□□□□ -0.75
PDCD2-204ENST00000453163 TPRXLQ17RH7 258 aa10.34□□□□□ -0.75
PDCD2-204ENST00000453163 KRTAP25-1Q3LHN0 102 aa10.29□□□□□ -0.76
PDCD2-204ENST00000453163 KRTAP3-3Q9BYR6 98 aa10.29□□□□□ -0.76
PDCD2-204ENST00000453163 S4R3F8 94 aa10.22□□□□□ -0.77
PDCD2-204ENST00000453163 HERC2O95714 4834 aa10.16□□□□□ -0.78
PDCD2-204ENST00000453163 K7ERS5 55 aa10.11□□□□□ -0.79
PDCD2-204ENST00000453163 KRTAP10-6P60371 365 aaPredicted RBP10.09□□□□□ -0.79
PDCD2-204ENST00000453163 H3BS24 57 aa10.07□□□□□ -0.8
PDCD2-204ENST00000453163 J3QL48 77 aa10.06□□□□□ -0.8
PDCD2-204ENST00000453163 ROMO1P60602 79 aa10.05□□□□□ -0.8
PDCD2-204ENST00000453163 KRTAP3-2Q9BYR7 98 aa10.05□□□□□ -0.8
PDCD2-204ENST00000453163 BIRC6Q9NR09 4857 aa10.01□□□□□ -0.81
PDCD2-204ENST00000453163 CRIPTQ9P021 101 aa10□□□□□ -0.81
PDCD2-204ENST00000453163 MUC17Q685J3 4493 aa9.97□□□□□ -0.81
PDCD2-204ENST00000453163 P0C880 135 aa9.96□□□□□ -0.82
PDCD2-204ENST00000453163 KRTAP13-4Q3LI77 160 aa9.96□□□□□ -0.82
PDCD2-204ENST00000453163 SEC61BP60468 96 aaKnown RBP9.94□□□□□ -0.82
PDCD2-204ENST00000453163 KRTAP4-1Q9BYQ7 146 aa9.87□□□□□ -0.83
PDCD2-204ENST00000453163 A0A0D9SG42 100 aa9.84□□□□□ -0.83
PDCD2-204ENST00000453163 PCLOQ9Y6V0 5065 aa9.72□□□□□ -0.85
PDCD2-204ENST00000453163 HERC1Q15751 4861 aa9.69□□□□□ -0.86
PDCD2-204ENST00000453163 MUC2Q02817 5179 aa9.68□□□□□ -0.86
PDCD2-204ENST00000453163 KRTAP19-2Q3LHN2 52 aa9.64□□□□□ -0.87
PDCD2-204ENST00000453163 C10orf95Q9H7T3 257 aa9.63□□□□□ -0.87
PDCD2-204ENST00000453163 KRTAP12-2P59991 146 aa9.63□□□□□ -0.87
PDCD2-204ENST00000453163 SPINT4Q6UDR6 99 aa9.59□□□□□ -0.87
PDCD2-204ENST00000453163 M0QZ58 72 aa9.59□□□□□ -0.87
PDCD2-204ENST00000453163 HMCN2Q8NDA2 5059 aa9.59□□□□□ -0.87
PDCD2-204ENST00000453163 KRTAP12-1P59990 96 aa9.56□□□□□ -0.88
PDCD2-204ENST00000453163 KRTAP15-1Q3LI76 137 aa9.47□□□□□ -0.89
PDCD2-204ENST00000453163 R4GN34 69 aa9.47□□□□□ -0.89
PDCD2-204ENST00000453163 FLGP20930 4061 aaPredicted RBP9.47□□□□□ -0.89
PDCD2-204ENST00000453163 LORP23490 312 aaPredicted RBP9.46□□□□□ -0.9
PDCD2-204ENST00000453163 NDUFAF8A1L188 74 aa9.28□□□□□ -0.92
PDCD2-204ENST00000453163 FAT4Q6V0I7 4981 aa9.24□□□□□ -0.93
PDCD2-204ENST00000453163 LCE2CQ5TA81 110 aa9.19□□□□□ -0.94
PDCD2-204ENST00000453163 UBR4Q5T4S7 5183 aa9.18□□□□□ -0.94
PDCD2-204ENST00000453163 RNF213Q63HN8 5207 aa9.15□□□□□ -0.94
PDCD2-204ENST00000453163 MT1HP80294 61 aa8.96□□□□□ -0.97
PDCD2-204ENST00000453163 M0R2T5 61 aa8.95□□□□□ -0.98
PDCD2-204ENST00000453163 CAMK2N1Q7Z7J9 78 aa8.94□□□□□ -0.98
PDCD2-204ENST00000453163 PLAC4Q8WY50 150 aa8.89□□□□□ -0.99
PDCD2-204ENST00000453163 SPRR2GQ9BYE4 73 aa8.79□□□□□ -1
PDCD2-204ENST00000453163 KRTAP19-1Q8IUB9 90 aa8.78□□□□□ -1
PDCD2-204ENST00000453163 MT2AP02795 61 aa8.74□□□□□ -1.01
PDCD2-204ENST00000453163 PP632Q6XCG6 107 aa8.74□□□□□ -1.01
PDCD2-204ENST00000453163 MT1FP04733 61 aa8.74□□□□□ -1.01
PDCD2-204ENST00000453163 KRTAP9-8Q9BYQ0 159 aa8.71□□□□□ -1.02
PDCD2-204ENST00000453163 KRTAP10-10P60014 251 aa8.7□□□□□ -1.02
PDCD2-204ENST00000453163 TNP1P09430 55 aa8.55□□□□□ -1.04
PDCD2-204ENST00000453163 LUZP6Q538Z0 58 aa8.51□□□□□ -1.05
PDCD2-204ENST00000453163 KRTAP19-8Q3LI54 63 aa8.45□□□□□ -1.06
PDCD2-204ENST00000453163 KRTAP23-1A1A580 65 aa8.42□□□□□ -1.06
PDCD2-204ENST00000453163 MT1BP07438 61 aa8.37□□□□□ -1.07
PDCD2-204ENST00000453163 KRTAP9-3Q9BYQ3 159 aa8.36□□□□□ -1.07
PDCD2-204ENST00000453163 SPRR5A0A1B0GTR4 108 aa8.31□□□□□ -1.08
PDCD2-204ENST00000453163 A0A0A0MQY5 61 aa8.27□□□□□ -1.08
PDCD2-204ENST00000453163 KRTAP10-5P60370 271 aa8.24□□□□□ -1.09
PDCD2-204ENST00000453163 MT1XP80297 61 aa8.24□□□□□ -1.09
PDCD2-204ENST00000453163 LCE3AQ5TA76 89 aa8.18□□□□□ -1.1
PDCD2-204ENST00000453163 LCE2AQ5TA79 106 aaPredicted RBP8.16□□□□□ -1.1
PDCD2-204ENST00000453163 LCE2BO14633 110 aa8.08□□□□□ -1.12
PDCD2-204ENST00000453163 USH2AO75445 5202 aa8.02□□□□□ -1.13
PDCD2-204ENST00000453163 KRTAP10-7P60409 375 aaPredicted RBP7.99□□□□□ -1.13
PDCD2-204ENST00000453163 KRTAP10-12P60413 245 aa7.97□□□□□ -1.13
PDCD2-204ENST00000453163 PRO2289Q9P1D8 64 aa7.96□□□□□ -1.14
PDCD2-204ENST00000453163 KRTAP8-1Q8IUC2 63 aa7.95□□□□□ -1.14
PDCD2-204ENST00000453163 KRTAP12-3P60328 96 aa7.79□□□□□ -1.16
PDCD2-204ENST00000453163 KMT2DO14686 5537 aa7.72□□□□□ -1.17
PDCD2-204ENST00000453163 KRTAP19-5Q3LI72 72 aa7.59□□□□□ -1.19
PDCD2-204ENST00000453163 KRTAP4-8A0A0G2JLE6 195 aa7.57□□□□□ -1.2
PDCD2-204ENST00000453163 KRTAP4-8Q9BYQ9 185 aa7.57□□□□□ -1.2
PDCD2-204ENST00000453163 SSPOA2VEC9 5147 aa7.56□□□□□ -1.2
PDCD2-204ENST00000453163 INE1O15225 51 aa7.49□□□□□ -1.21
PDCD2-204ENST00000453163 FSIP2Q5CZC0 6907 aa7.42□□□□□ -1.22
PDCD2-204ENST00000453163 KRTAP19-7Q3SYF9 63 aa7.34□□□□□ -1.23
PDCD2-204ENST00000453163 KRTAP19-6Q3LI70 58 aa7.34□□□□□ -1.23
PDCD2-204ENST00000453163 LCE3CQ5T5A8 94 aa7.31□□□□□ -1.24
PDCD2-204ENST00000453163 MT1EP04732 61 aa7.15□□□□□ -1.26
PDCD2-204ENST00000453163 MT1LQ93083 61 aa7.1□□□□□ -1.27
PDCD2-204ENST00000453163 KRTAP4-7Q9BYR0 210 aa7.1□□□□□ -1.27
PDCD2-204ENST00000453163 LCE2DQ5TA82 110 aaPredicted RBP7.1□□□□□ -1.27
PDCD2-204ENST00000453163 FCGBPQ9Y6R7 5405 aaPredicted RBP7.08□□□□□ -1.28
PDCD2-204ENST00000453163 KRTAP9-6A8MVA2 160 aa7.05□□□□□ -1.28
PDCD2-204ENST00000453163 KRTAP19-4Q3LI73 84 aa6.95□□□□□ -1.3
PDCD2-204ENST00000453163 MUC12Q9UKN1 5478 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms