RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 LUZP6Q538Z0 58 aa6.59□□□□□ -1.35
COL27A1-202ENST00000451716 EPPK1P58107 5090 aaKnown RBP6.59□□□□□ -1.36
COL27A1-202ENST00000451716 KIAA1109Q2LD37 5005 aa6.57□□□□□ -1.36
COL27A1-202ENST00000451716 DMBT1Q9UGM3 2413 aaPredicted RBP6.57□□□□□ -1.36
COL27A1-202ENST00000451716 Q8N1X5 172 aa6.56□□□□□ -1.36
COL27A1-202ENST00000451716 TNXBP22105 4242 aa6.55□□□□□ -1.36
COL27A1-202ENST00000451716 MYCBP2O75592 4640 aa6.53□□□□□ -1.36
COL27A1-202ENST00000451716 Q5VSD8 79 aa6.53□□□□□ -1.36
COL27A1-202ENST00000451716 FAT3Q8TDW7 4589 aa6.53□□□□□ -1.36
COL27A1-202ENST00000451716 RYR1P21817 5038 aa6.52□□□□□ -1.37
COL27A1-202ENST00000451716 KRTAP17-1Q9BYP8 105 aa6.51□□□□□ -1.37
COL27A1-202ENST00000451716 SEC61BP60468 96 aaKnown RBP6.47□□□□□ -1.37
COL27A1-202ENST00000451716 KRTAP15-1Q3LI76 137 aa6.46□□□□□ -1.38
COL27A1-202ENST00000451716 KRTAP10-8P60410 259 aa6.45□□□□□ -1.38
COL27A1-202ENST00000451716 K7ERS5 55 aa6.44□□□□□ -1.38
COL27A1-202ENST00000451716 KRTAP3-1Q9BYR8 98 aa6.41□□□□□ -1.38
COL27A1-202ENST00000451716 H0YAA0 97 aa6.39□□□□□ -1.39
COL27A1-202ENST00000451716 MT1HL1P0DM35 61 aa6.32□□□□□ -1.4
COL27A1-202ENST00000451716 XP32Q5T750 250 aa6.3□□□□□ -1.4
COL27A1-202ENST00000451716 ABCA13Q86UQ4 5058 aa6.28□□□□□ -1.4
COL27A1-202ENST00000451716 LPAP08519 4548 aa6.28□□□□□ -1.4
COL27A1-202ENST00000451716 RPL37P61927 97 aaKnown RBP6.28□□□□□ -1.4
COL27A1-202ENST00000451716 COX6B2Q6YFQ2 88 aa6.28□□□□□ -1.4
COL27A1-202ENST00000451716 TPRXLQ17RH7 258 aa6.27□□□□□ -1.41
COL27A1-202ENST00000451716 LRP2P98164 4655 aa6.26□□□□□ -1.41
COL27A1-202ENST00000451716 J3QL48 77 aa6.24□□□□□ -1.41
COL27A1-202ENST00000451716 KRTAP4-5Q9BYR2 181 aa6.24□□□□□ -1.41
COL27A1-202ENST00000451716 A0A1B0GU33 70 aa6.19□□□□□ -1.42
COL27A1-202ENST00000451716 C10orf95Q9H7T3 257 aa6.19□□□□□ -1.42
COL27A1-202ENST00000451716 KRTAP3-3Q9BYR6 98 aa6.13□□□□□ -1.43
COL27A1-202ENST00000451716 H1FX-AS1Q4G0G2 97 aa6.11□□□□□ -1.43
COL27A1-202ENST00000451716 HERC2O95714 4834 aa6.09□□□□□ -1.43
COL27A1-202ENST00000451716 S4R3F8 94 aa6.08□□□□□ -1.44
COL27A1-202ENST00000451716 MUC2Q02817 5179 aa6.07□□□□□ -1.44
COL27A1-202ENST00000451716 PCLOQ9Y6V0 5065 aa6.05□□□□□ -1.44
COL27A1-202ENST00000451716 HERC1Q15751 4861 aa6.04□□□□□ -1.44
COL27A1-202ENST00000451716 KRTAP10-6P60371 365 aaPredicted RBP6.03□□□□□ -1.44
COL27A1-202ENST00000451716 KRTAP3-2Q9BYR7 98 aa6□□□□□ -1.45
COL27A1-202ENST00000451716 KRTAP13-4Q3LI77 160 aa5.98□□□□□ -1.45
COL27A1-202ENST00000451716 A0A0D9SG42 100 aa5.95□□□□□ -1.46
COL27A1-202ENST00000451716 BIRC6Q9NR09 4857 aa5.9□□□□□ -1.46
COL27A1-202ENST00000451716 MUC17Q685J3 4493 aa5.9□□□□□ -1.46
COL27A1-202ENST00000451716 KRTAP4-1Q9BYQ7 146 aa5.88□□□□□ -1.47
COL27A1-202ENST00000451716 CAMK2N1Q7Z7J9 78 aa5.87□□□□□ -1.47
COL27A1-202ENST00000451716 RNF213Q63HN8 5207 aa5.85□□□□□ -1.47
COL27A1-202ENST00000451716 KRTAP12-2P59991 146 aa5.76□□□□□ -1.49
COL27A1-202ENST00000451716 PLAC4Q8WY50 150 aa5.76□□□□□ -1.49
COL27A1-202ENST00000451716 UBR4Q5T4S7 5183 aa5.75□□□□□ -1.49
COL27A1-202ENST00000451716 FAT4Q6V0I7 4981 aa5.71□□□□□ -1.5
COL27A1-202ENST00000451716 KRTAP12-1P59990 96 aa5.7□□□□□ -1.5
COL27A1-202ENST00000451716 KRTAP19-2Q3LHN2 52 aa5.7□□□□□ -1.5
COL27A1-202ENST00000451716 M0QZ58 72 aa5.69□□□□□ -1.5
COL27A1-202ENST00000451716 LORP23490 312 aaPredicted RBP5.68□□□□□ -1.5
COL27A1-202ENST00000451716 HMCN2Q8NDA2 5059 aa5.68□□□□□ -1.5
COL27A1-202ENST00000451716 R4GN34 69 aa5.65□□□□□ -1.5
COL27A1-202ENST00000451716 FLGP20930 4061 aaPredicted RBP5.6□□□□□ -1.51
COL27A1-202ENST00000451716 PRO2289Q9P1D8 64 aa5.6□□□□□ -1.51
COL27A1-202ENST00000451716 LCE2CQ5TA81 110 aa5.44□□□□□ -1.54
COL27A1-202ENST00000451716 M0R2T5 61 aa5.34□□□□□ -1.55
COL27A1-202ENST00000451716 MT1HP80294 61 aa5.3□□□□□ -1.56
COL27A1-202ENST00000451716 INE1O15225 51 aa5.25□□□□□ -1.57
COL27A1-202ENST00000451716 KRTAP19-1Q8IUB9 90 aa5.21□□□□□ -1.58
COL27A1-202ENST00000451716 MT1FP04733 61 aa5.19□□□□□ -1.58
COL27A1-202ENST00000451716 KRTAP10-10P60014 251 aa5.18□□□□□ -1.58
COL27A1-202ENST00000451716 SPRR2GQ9BYE4 73 aa5.18□□□□□ -1.58
COL27A1-202ENST00000451716 MT2AP02795 61 aa5.18□□□□□ -1.58
COL27A1-202ENST00000451716 KRTAP9-8Q9BYQ0 159 aa5.16□□□□□ -1.58
COL27A1-202ENST00000451716 PP632Q6XCG6 107 aa5.14□□□□□ -1.59
COL27A1-202ENST00000451716 SPRR5A0A1B0GTR4 108 aa5.12□□□□□ -1.59
COL27A1-202ENST00000451716 USH2AO75445 5202 aa5.11□□□□□ -1.59
COL27A1-202ENST00000451716 TNP1P09430 55 aa5.1□□□□□ -1.59
COL27A1-202ENST00000451716 FSIP2Q5CZC0 6907 aa5.07□□□□□ -1.6
COL27A1-202ENST00000451716 KRTAP23-1A1A580 65 aa5.07□□□□□ -1.6
COL27A1-202ENST00000451716 KRTAP19-8Q3LI54 63 aa4.97□□□□□ -1.61
COL27A1-202ENST00000451716 MT1BP07438 61 aa4.96□□□□□ -1.62
COL27A1-202ENST00000451716 KRTAP9-3Q9BYQ3 159 aa4.94□□□□□ -1.62
COL27A1-202ENST00000451716 LCE3AQ5TA76 89 aa4.9□□□□□ -1.63
COL27A1-202ENST00000451716 KRTAP10-5P60370 271 aa4.89□□□□□ -1.63
COL27A1-202ENST00000451716 MT1XP80297 61 aa4.89□□□□□ -1.63
COL27A1-202ENST00000451716 KMT2DO14686 5537 aa4.81□□□□□ -1.64
COL27A1-202ENST00000451716 LCE2BO14633 110 aa4.8□□□□□ -1.64
COL27A1-202ENST00000451716 LCE2AQ5TA79 106 aaPredicted RBP4.78□□□□□ -1.64
COL27A1-202ENST00000451716 KRTAP10-7P60409 375 aaPredicted RBP4.78□□□□□ -1.64
COL27A1-202ENST00000451716 KRTAP10-12P60413 245 aa4.74□□□□□ -1.65
COL27A1-202ENST00000451716 KRTAP8-1Q8IUC2 63 aa4.71□□□□□ -1.66
COL27A1-202ENST00000451716 KRTAP12-3P60328 96 aa4.65□□□□□ -1.67
COL27A1-202ENST00000451716 SSPOA2VEC9 5147 aa4.58□□□□□ -1.68
COL27A1-202ENST00000451716 KRTAP4-8A0A0G2JLE6 195 aa4.55□□□□□ -1.68
COL27A1-202ENST00000451716 KRTAP4-8Q9BYQ9 185 aa4.55□□□□□ -1.68
COL27A1-202ENST00000451716 KRTAP19-5Q3LI72 72 aa4.53□□□□□ -1.68
COL27A1-202ENST00000451716 KRTAP19-7Q3SYF9 63 aa4.36□□□□□ -1.71
COL27A1-202ENST00000451716 LCE3CQ5T5A8 94 aa4.35□□□□□ -1.71
COL27A1-202ENST00000451716 FCGBPQ9Y6R7 5405 aaPredicted RBP4.34□□□□□ -1.71
COL27A1-202ENST00000451716 MUC12Q9UKN1 5478 aa4.31□□□□□ -1.72
COL27A1-202ENST00000451716 KRTAP4-7Q9BYR0 210 aa4.3□□□□□ -1.72
COL27A1-202ENST00000451716 KRTAP19-6Q3LI70 58 aa4.29□□□□□ -1.72
COL27A1-202ENST00000451716 DSTQ03001 7570 aaKnown RBP4.26□□□□□ -1.73
COL27A1-202ENST00000451716 SYNE2Q8WXH0 6885 aaKnown RBP4.25□□□□□ -1.73
COL27A1-202ENST00000451716 KRTAP9-6A8MVA2 160 aa4.24□□□□□ -1.73
COL27A1-202ENST00000451716 MT1EP04732 61 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 151.2 ms