RNA–Protein interactions for RNA: ENST00000451542.5

SMPD4-212, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 796 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-212ENST00000451542 SMIM20Q8N5G0 67 aa5.65□□□□□ -1.5
SMPD4-212ENST00000451542 MT-ATP8P03928 68 aa5.63□□□□□ -1.51
SMPD4-212ENST00000451542 NDUFC1O43677 76 aa5.62□□□□□ -1.51
SMPD4-212ENST00000451542 KLKP1Q107X0 134 aa5.6□□□□□ -1.51
SMPD4-212ENST00000451542 LCE2BO14633 110 aa5.59□□□□□ -1.51
SMPD4-212ENST00000451542 TRAV7A0A075B6U4 112 aa5.58□□□□□ -1.52
SMPD4-212ENST00000451542 CRIPTQ9P021 101 aa5.51□□□□□ -1.53
SMPD4-212ENST00000451542 DMAC1Q96GE9 116 aa5.5□□□□□ -1.53
SMPD4-212ENST00000451542 H0YAA0 97 aa5.49□□□□□ -1.53
SMPD4-212ENST00000451542 KRTAP19-1Q8IUB9 90 aa5.47□□□□□ -1.53
SMPD4-212ENST00000451542 ACYP2P14621 99 aa5.46□□□□□ -1.54
SMPD4-212ENST00000451542 USH2AO75445 5202 aa5.45□□□□□ -1.54
SMPD4-212ENST00000451542 SERP2Q8N6R1 65 aa5.44□□□□□ -1.54
SMPD4-212ENST00000451542 SPRR2GQ9BYE4 73 aa5.44□□□□□ -1.54
SMPD4-212ENST00000451542 KRTAP19-6Q3LI70 58 aa5.43□□□□□ -1.54
SMPD4-212ENST00000451542 C20orf197Q8N268 126 aa5.43□□□□□ -1.54
SMPD4-212ENST00000451542 Q5VV11 94 aa5.42□□□□□ -1.54
SMPD4-212ENST00000451542 SPTSSBQ8NFR3 76 aa5.42□□□□□ -1.54
SMPD4-212ENST00000451542 ADM2Q7Z4H4 148 aa5.41□□□□□ -1.54
SMPD4-212ENST00000451542 SNURFQ9Y675 71 aa5.41□□□□□ -1.54
SMPD4-212ENST00000451542 SSPOA2VEC9 5147 aa5.39□□□□□ -1.55
SMPD4-212ENST00000451542 CHKB-CPT1BH3BT56 60 aa5.39□□□□□ -1.55
SMPD4-212ENST00000451542 KRTAP19-8Q3LI54 63 aa5.37□□□□□ -1.55
SMPD4-212ENST00000451542 SPANXA2-OT1Q8N9U9 137 aa5.37□□□□□ -1.55
SMPD4-212ENST00000451542 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.35□□□□□ -1.55
SMPD4-212ENST00000451542 R4GN34 69 aa5.32□□□□□ -1.56
SMPD4-212ENST00000451542 MT1BP07438 61 aa5.31□□□□□ -1.56
SMPD4-212ENST00000451542 COX7CP15954 63 aa5.31□□□□□ -1.56
SMPD4-212ENST00000451542 A6NN06 94 aa5.3□□□□□ -1.56
SMPD4-212ENST00000451542 FCGBPQ9Y6R7 5405 aaPredicted RBP5.27□□□□□ -1.57
SMPD4-212ENST00000451542 KRTAP9-7A8MTY7 169 aa5.26□□□□□ -1.57
SMPD4-212ENST00000451542 M0QZ58 72 aa5.26□□□□□ -1.57
SMPD4-212ENST00000451542 P0C880 135 aa5.26□□□□□ -1.57
SMPD4-212ENST00000451542 PLAC4Q8WY50 150 aa5.23□□□□□ -1.57
SMPD4-212ENST00000451542 H3BS24 57 aa5.22□□□□□ -1.57
SMPD4-212ENST00000451542 ANAPC13Q9BS18 74 aa5.22□□□□□ -1.57
SMPD4-212ENST00000451542 KRTAP10-5P60370 271 aa5.2□□□□□ -1.58
SMPD4-212ENST00000451542 COA5Q86WW8 74 aa5.19□□□□□ -1.58
SMPD4-212ENST00000451542 SVIPQ8NHG7 77 aa5.18□□□□□ -1.58
SMPD4-212ENST00000451542 PRO2289Q9P1D8 64 aa5.18□□□□□ -1.58
SMPD4-212ENST00000451542 LINC01554Q52M75 96 aa5.17□□□□□ -1.58
SMPD4-212ENST00000451542 H7BZZ5 65 aa5.16□□□□□ -1.58
SMPD4-212ENST00000451542 SEC61GP60059 68 aa5.15□□□□□ -1.59
SMPD4-212ENST00000451542 MACF1Q9UPN3 7388 aaKnown RBP5.13□□□□□ -1.59
SMPD4-212ENST00000451542 SERP1Q9Y6X1 66 aa5.12□□□□□ -1.59
SMPD4-212ENST00000451542 KRTAP6-3Q3LI67 103 aa5.09□□□□□ -1.59
SMPD4-212ENST00000451542 CYSTM1Q9H1C7 97 aa5.08□□□□□ -1.6
SMPD4-212ENST00000451542 SYNE2Q8WXH0 6885 aaKnown RBP5.07□□□□□ -1.6
SMPD4-212ENST00000451542 ATP5EP56381 51 aaPredicted RBP5.04□□□□□ -1.6
SMPD4-212ENST00000451542 CCDC179H3BU77 68 aa5.03□□□□□ -1.6
SMPD4-212ENST00000451542 MT1XP80297 61 aa5.02□□□□□ -1.61
SMPD4-212ENST00000451542 A0A1B0GU33 70 aa4.97□□□□□ -1.61
SMPD4-212ENST00000451542 A0A1B0GU69 56 aa4.97□□□□□ -1.61
SMPD4-212ENST00000451542 KRTAP13-4Q3LI77 160 aa4.94□□□□□ -1.62
SMPD4-212ENST00000451542 CAMK2N1Q7Z7J9 78 aa4.94□□□□□ -1.62
SMPD4-212ENST00000451542 KRTAP12-2P59991 146 aa4.93□□□□□ -1.62
SMPD4-212ENST00000451542 TMEM258P61165 79 aa4.93□□□□□ -1.62
SMPD4-212ENST00000451542 PRR15LQ9BU68 103 aa4.92□□□□□ -1.62
SMPD4-212ENST00000451542 A0A0D9SG42 100 aa4.89□□□□□ -1.63
SMPD4-212ENST00000451542 KRTAP5-9P26371 169 aa4.88□□□□□ -1.63
SMPD4-212ENST00000451542 SPATA8Q6RVD6 105 aa4.88□□□□□ -1.63
SMPD4-212ENST00000451542 SMIM26A0A096LP01 95 aa4.87□□□□□ -1.63
SMPD4-212ENST00000451542 KRTAP8-1Q8IUC2 63 aa4.86□□□□□ -1.63
SMPD4-212ENST00000451542 SPINT4Q6UDR6 99 aa4.85□□□□□ -1.63
SMPD4-212ENST00000451542 SPRR2FQ96RM1 72 aa4.81□□□□□ -1.64
SMPD4-212ENST00000451542 LINC01558Q9Y6Z2 57 aa4.81□□□□□ -1.64
SMPD4-212ENST00000451542 KRTAP10-12P60413 245 aa4.8□□□□□ -1.64
SMPD4-212ENST00000451542 KRTAP10-7P60409 375 aaPredicted RBP4.79□□□□□ -1.64
SMPD4-212ENST00000451542 KRTAP12-1P59990 96 aa4.76□□□□□ -1.65
SMPD4-212ENST00000451542 NEBP20929 6669 aa4.75□□□□□ -1.65
SMPD4-212ENST00000451542 KRTAP4-8A0A0G2JLE6 195 aa4.75□□□□□ -1.65
SMPD4-212ENST00000451542 KRTAP4-8Q9BYQ9 185 aa4.75□□□□□ -1.65
SMPD4-212ENST00000451542 UQCR11O14957 56 aa4.72□□□□□ -1.65
SMPD4-212ENST00000451542 A8MU10 97 aa4.71□□□□□ -1.66
SMPD4-212ENST00000451542 V9GYY9 64 aa4.71□□□□□ -1.66
SMPD4-212ENST00000451542 SPRR2EP22531 72 aa4.7□□□□□ -1.66
SMPD4-212ENST00000451542 SPRR2BP35325 72 aa4.7□□□□□ -1.66
SMPD4-212ENST00000451542 SPRR2AP35326 72 aa4.7□□□□□ -1.66
SMPD4-212ENST00000451542 MUC12Q9UKN1 5478 aa4.68□□□□□ -1.66
SMPD4-212ENST00000451542 KMT2DO14686 5537 aa4.68□□□□□ -1.66
SMPD4-212ENST00000451542 KRTAP20-1Q3LI63 56 aa4.65□□□□□ -1.67
SMPD4-212ENST00000451542 LCE1AQ5T7P2 110 aa4.62□□□□□ -1.67
SMPD4-212ENST00000451542 MIR22HGQ0VDD5 57 aa4.6□□□□□ -1.67
SMPD4-212ENST00000451542 K7ERS5 55 aa4.59□□□□□ -1.67
SMPD4-212ENST00000451542 TNP1P09430 55 aa4.59□□□□□ -1.67
SMPD4-212ENST00000451542 Q1T7F1 81 aa4.59□□□□□ -1.67
SMPD4-212ENST00000451542 KRTAP2-3P0C7H8 128 aa4.58□□□□□ -1.68
SMPD4-212ENST00000451542 KRTAP2-4Q9BYR9 128 aa4.58□□□□□ -1.68
SMPD4-212ENST00000451542 PSPHP1O15172 72 aa4.57□□□□□ -1.68
SMPD4-212ENST00000451542 PCP4P48539 62 aa4.56□□□□□ -1.68
SMPD4-212ENST00000451542 SPRR2DP22532 72 aa4.55□□□□□ -1.68
SMPD4-212ENST00000451542 MDN1Q9NU22 5596 aa4.53□□□□□ -1.68
SMPD4-212ENST00000451542 C10orf95Q9H7T3 257 aa4.52□□□□□ -1.69
SMPD4-212ENST00000451542 RPS28P62857 69 aaKnown RBP4.51□□□□□ -1.69
SMPD4-212ENST00000451542 KRTAP19-7Q3SYF9 63 aa4.48□□□□□ -1.69
SMPD4-212ENST00000451542 A6NED7 52 aa4.47□□□□□ -1.69
SMPD4-212ENST00000451542 KRTAP23-1A1A580 65 aa4.46□□□□□ -1.7
SMPD4-212ENST00000451542 MT1EP04732 61 aa4.45□□□□□ -1.7
SMPD4-212ENST00000451542 KRTAP2-2Q9BYT5 123 aa4.45□□□□□ -1.7
SMPD4-212ENST00000451542 KRTAP2-1Q9BYU5 128 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms