RNA–Protein interactions for RNA: ENST00000448087.5

GTF3C3-205, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 1,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-205ENST00000448087 CSMD1Q96PZ7 3565 aa0.97□□□□□ -2.25
GTF3C3-205ENST00000448087 CHD8Q9HCK8 2581 aa0.97□□□□□ -2.25
GTF3C3-205ENST00000448087 MUC5ACP98088 5654 aa0.97□□□□□ -2.25
GTF3C3-205ENST00000448087 GCN1Q92616 2671 aaKnown RBP0.97□□□□□ -2.25
GTF3C3-205ENST00000448087 CFAP46Q8IYW2 2715 aa0.97□□□□□ -2.25
GTF3C3-205ENST00000448087 LINC01556Q5JQF7 62 aa0.97□□□□□ -2.25
GTF3C3-205ENST00000448087 CACNA1AO00555 2505 aa0.96□□□□□ -2.26
GTF3C3-205ENST00000448087 SYNE2Q8WXH0 6885 aaKnown RBP0.96□□□□□ -2.26
GTF3C3-205ENST00000448087 BSNQ9UPA5 3926 aa0.96□□□□□ -2.26
GTF3C3-205ENST00000448087 ITPR2Q14571 2701 aa0.95□□□□□ -2.26
GTF3C3-205ENST00000448087 DNAH8Q96JB1 4490 aa0.95□□□□□ -2.26
GTF3C3-205ENST00000448087 TACC2O95359 2948 aa0.95□□□□□ -2.26
GTF3C3-205ENST00000448087 H3BNG1 76 aa0.95□□□□□ -2.26
GTF3C3-205ENST00000448087 WDFY3Q8IZQ1 3526 aa0.95□□□□□ -2.26
GTF3C3-205ENST00000448087 TLN1Q9Y490 2541 aaKnown RBP0.95□□□□□ -2.26
GTF3C3-205ENST00000448087 USP9XQ93008 2570 aaPredicted RBP0.95□□□□□ -2.26
GTF3C3-205ENST00000448087 SMG1Q96Q15 3661 aaKnown RBP0.95□□□□□ -2.26
GTF3C3-205ENST00000448087 TEX15Q9BXT5 2789 aa0.95□□□□□ -2.26
GTF3C3-205ENST00000448087 ADGRG4Q8IZF6 3080 aa0.95□□□□□ -2.26
GTF3C3-205ENST00000448087 ACANP16112 2415 aa0.94□□□□□ -2.26
GTF3C3-205ENST00000448087 SETXQ7Z333 2677 aaKnown RBP0.94□□□□□ -2.26
GTF3C3-205ENST00000448087 HIVEP1P15822 2718 aa0.94□□□□□ -2.26
GTF3C3-205ENST00000448087 TENM4Q6N022 2769 aa0.94□□□□□ -2.26
GTF3C3-205ENST00000448087 ZANQ9Y493 2812 aa0.94□□□□□ -2.26
GTF3C3-205ENST00000448087 FBN2P35556 2912 aa0.94□□□□□ -2.26
GTF3C3-205ENST00000448087 TGP01266 2768 aa0.94□□□□□ -2.26
GTF3C3-205ENST00000448087 SPTAN1Q13813 2472 aaKnown RBP0.94□□□□□ -2.26
GTF3C3-205ENST00000448087 SPART-AS1P0CW21 52 aa0.94□□□□□ -2.26
GTF3C3-205ENST00000448087 KRTAP5-10Q6L8G5 202 aa0.94□□□□□ -2.26
GTF3C3-205ENST00000448087 MXRA5Q9NR99 2828 aa0.93□□□□□ -2.26
GTF3C3-205ENST00000448087 TNP1P09430 55 aa0.93□□□□□ -2.26
GTF3C3-205ENST00000448087 NBEAL1Q6ZS30 2694 aa0.92□□□□□ -2.26
GTF3C3-205ENST00000448087 CSMD2Q7Z408 3487 aa0.92□□□□□ -2.26
GTF3C3-205ENST00000448087 MTORP42345 2549 aa0.92□□□□□ -2.26
GTF3C3-205ENST00000448087 KRTAP2-3P0C7H8 128 aa0.92□□□□□ -2.26
GTF3C3-205ENST00000448087 KRTAP2-4Q9BYR9 128 aa0.92□□□□□ -2.26
GTF3C3-205ENST00000448087 KRTAP2-1Q9BYU5 128 aa0.92□□□□□ -2.26
GTF3C3-205ENST00000448087 U3KQA8 63 aa0.92□□□□□ -2.26
GTF3C3-205ENST00000448087 MYO15AQ9UKN7 3530 aa0.91□□□□□ -2.26
GTF3C3-205ENST00000448087 DNAH14Q0VDD8 3507 aa0.91□□□□□ -2.26
GTF3C3-205ENST00000448087 ZFYVE26Q68DK2 2539 aa0.91□□□□□ -2.26
GTF3C3-205ENST00000448087 DEFB135Q30KP9 77 aa0.91□□□□□ -2.26
GTF3C3-205ENST00000448087 STAB1Q9NY15 2570 aa0.91□□□□□ -2.26
GTF3C3-205ENST00000448087 CENPEQ02224 2701 aa0.91□□□□□ -2.26
GTF3C3-205ENST00000448087 NSD1Q96L73 2696 aaPredicted RBP0.9□□□□□ -2.27
GTF3C3-205ENST00000448087 FRAS1Q86XX4 4008 aa0.9□□□□□ -2.27
GTF3C3-205ENST00000448087 DOPEY1Q5JWR5 2465 aa0.9□□□□□ -2.27
GTF3C3-205ENST00000448087 CDH23Q9H251 3354 aa0.9□□□□□ -2.27
GTF3C3-205ENST00000448087 ACACBO00763 2458 aa0.89□□□□□ -2.27
GTF3C3-205ENST00000448087 PKD1L1Q8TDX9 2849 aa0.89□□□□□ -2.27
GTF3C3-205ENST00000448087 ANKRD11Q6UB99 2663 aaPredicted RBP0.89□□□□□ -2.27
GTF3C3-205ENST00000448087 MYO18BQ8IUG5 2567 aa0.89□□□□□ -2.27
GTF3C3-205ENST00000448087 TLN2Q9Y4G6 2542 aa0.89□□□□□ -2.27
GTF3C3-205ENST00000448087 HTN3P15516 51 aa0.89□□□□□ -2.27
GTF3C3-205ENST00000448087 SVEP1Q4LDE5 3571 aa0.89□□□□□ -2.27
GTF3C3-205ENST00000448087 STAB2Q8WWQ8 2551 aa0.89□□□□□ -2.27
GTF3C3-205ENST00000448087 EYSQ5T1H1 3165 aa0.88□□□□□ -2.27
GTF3C3-205ENST00000448087 HRNRQ86YZ3 2850 aaPredicted RBP0.88□□□□□ -2.27
GTF3C3-205ENST00000448087 LYSTQ99698 3801 aa0.88□□□□□ -2.27
GTF3C3-205ENST00000448087 UNC79Q9P2D8 2635 aa0.88□□□□□ -2.27
GTF3C3-205ENST00000448087 FLNAP21333 2647 aaKnown RBP0.87□□□□□ -2.27
GTF3C3-205ENST00000448087 DEFB4AO15263 64 aa0.87□□□□□ -2.27
GTF3C3-205ENST00000448087 KMT2AQ03164 3969 aa0.87□□□□□ -2.27
GTF3C3-205ENST00000448087 TEP1Q99973 2627 aaKnown RBP0.87□□□□□ -2.27
GTF3C3-205ENST00000448087 CUBNO60494 3623 aa0.87□□□□□ -2.27
GTF3C3-205ENST00000448087 C9orf92A6NGG3 77 aa0.86□□□□□ -2.27
GTF3C3-205ENST00000448087 FLNBO75369 2602 aaKnown RBP0.86□□□□□ -2.27
GTF3C3-205ENST00000448087 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
GTF3C3-205ENST00000448087 M0R2T5 61 aa0.86□□□□□ -2.27
GTF3C3-205ENST00000448087 SMR3AQ99954 134 aa0.86□□□□□ -2.27
GTF3C3-205ENST00000448087 TENM3Q9P273 2699 aa0.85□□□□□ -2.27
GTF3C3-205ENST00000448087 KRTAP8-1Q8IUC2 63 aa0.85□□□□□ -2.27
GTF3C3-205ENST00000448087 FASNP49327 2511 aaKnown RBP0.85□□□□□ -2.27
GTF3C3-205ENST00000448087 ANK2Q01484 3957 aa0.85□□□□□ -2.27
GTF3C3-205ENST00000448087 CEP295Q9C0D2 2601 aa0.84□□□□□ -2.27
GTF3C3-205ENST00000448087 RPS29P62273 56 aaKnown RBP0.84□□□□□ -2.27
GTF3C3-205ENST00000448087 NOTCH1P46531 2555 aa0.84□□□□□ -2.27
GTF3C3-205ENST00000448087 DNAH2Q9P225 4427 aa0.84□□□□□ -2.27
GTF3C3-205ENST00000448087 MGAM2Q2M2H8 2515 aa0.84□□□□□ -2.28
GTF3C3-205ENST00000448087 TRRAPQ9Y4A5 3859 aa0.83□□□□□ -2.28
GTF3C3-205ENST00000448087 DNAH3Q8TD57 4116 aa0.83□□□□□ -2.28
GTF3C3-205ENST00000448087 PKHD1L1Q86WI1 4243 aa0.83□□□□□ -2.28
GTF3C3-205ENST00000448087 TNXBP22105 4242 aa0.83□□□□□ -2.28
GTF3C3-205ENST00000448087 DNAH10Q8IVF4 4471 aa0.82□□□□□ -2.28
GTF3C3-205ENST00000448087 SACSQ9NZJ4 4579 aa0.82□□□□□ -2.28
GTF3C3-205ENST00000448087 DNAH17Q9UFH2 4485 aa0.82□□□□□ -2.28
GTF3C3-205ENST00000448087 ZNF469Q96JG9 3925 aaPredicted RBP0.82□□□□□ -2.28
GTF3C3-205ENST00000448087 FSIP2Q5CZC0 6907 aa0.82□□□□□ -2.28
GTF3C3-205ENST00000448087 VPS13BQ7Z7G8 4022 aa0.81□□□□□ -2.28
GTF3C3-205ENST00000448087 MYO9AB2RTY4 2548 aa0.81□□□□□ -2.28
GTF3C3-205ENST00000448087 DYNC2H1Q8NCM8 4307 aaKnown RBP0.81□□□□□ -2.28
GTF3C3-205ENST00000448087 DNAH1Q9P2D7 4330 aa0.81□□□□□ -2.28
GTF3C3-205ENST00000448087 DNAH9Q9NYC9 4486 aa0.8□□□□□ -2.28
GTF3C3-205ENST00000448087 MAST4O15021 2626 aa0.8□□□□□ -2.28
GTF3C3-205ENST00000448087 APOBP04114 4563 aaKnown RBP0.8□□□□□ -2.28
GTF3C3-205ENST00000448087 IGSF10Q6WRI0 2623 aa0.8□□□□□ -2.28
GTF3C3-205ENST00000448087 VPS13CQ709C8 3753 aa0.8□□□□□ -2.28
GTF3C3-205ENST00000448087 ANK3Q12955 4377 aaKnown RBP0.79□□□□□ -2.28
GTF3C3-205ENST00000448087 PRM1P04553 51 aa0.79□□□□□ -2.28
GTF3C3-205ENST00000448087 FAT3Q8TDW7 4589 aa0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms