RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 COX6B2Q6YFQ2 88 aa3.81□□□□□ -1.8
AC004540.1-206ENST00000448056 H0Y9P7 68 aa3.8□□□□□ -1.8
AC004540.1-206ENST00000448056 ATOX1O00244 68 aa3.8□□□□□ -1.8
AC004540.1-206ENST00000448056 C5orf47Q569G3 176 aa3.8□□□□□ -1.8
AC004540.1-206ENST00000448056 CYP4F30PQ9H0H9 118 aa3.8□□□□□ -1.8
AC004540.1-206ENST00000448056 LOC101927531A0A1B0GV80 90 aa3.79□□□□□ -1.8
AC004540.1-206ENST00000448056 FAM236DA0A1B0GTK5 79 aa3.78□□□□□ -1.8
AC004540.1-206ENST00000448056 FAM236CP0DP71 79 aa3.78□□□□□ -1.8
AC004540.1-206ENST00000448056 MP68P56378 58 aa3.78□□□□□ -1.8
AC004540.1-206ENST00000448056 SMIM20Q8N5G0 67 aa3.78□□□□□ -1.8
AC004540.1-206ENST00000448056 C1orf64Q8NEQ6 169 aa3.78□□□□□ -1.8
AC004540.1-206ENST00000448056 TRAV7A0A075B6U4 112 aa3.77□□□□□ -1.81
AC004540.1-206ENST00000448056 MT1HP80294 61 aa3.77□□□□□ -1.81
AC004540.1-206ENST00000448056 C4orf26Q17RF5 130 aa3.77□□□□□ -1.81
AC004540.1-206ENST00000448056 LINC00208Q96KT6 92 aa3.77□□□□□ -1.81
AC004540.1-206ENST00000448056 H3BPC8 53 aa3.76□□□□□ -1.81
AC004540.1-206ENST00000448056 FLGP20930 4061 aaPredicted RBP3.73□□□□□ -1.81
AC004540.1-206ENST00000448056 KLKP1Q107X0 134 aa3.73□□□□□ -1.81
AC004540.1-206ENST00000448056 H1FX-AS1Q4G0G2 97 aa3.73□□□□□ -1.81
AC004540.1-206ENST00000448056 SERP2Q8N6R1 65 aa3.73□□□□□ -1.81
AC004540.1-206ENST00000448056 M0R2T5 61 aa3.72□□□□□ -1.81
AC004540.1-206ENST00000448056 KRTAP5-3Q6L8H2 238 aa3.68□□□□□ -1.82
AC004540.1-206ENST00000448056 KRTAP10-6P60371 365 aaPredicted RBP3.67□□□□□ -1.82
AC004540.1-206ENST00000448056 C20orf197Q8N268 126 aa3.67□□□□□ -1.82
AC004540.1-206ENST00000448056 SNURFQ9Y675 71 aa3.67□□□□□ -1.82
AC004540.1-206ENST00000448056 COX7CP15954 63 aa3.66□□□□□ -1.82
AC004540.1-206ENST00000448056 A8MUN3 132 aa3.65□□□□□ -1.83
AC004540.1-206ENST00000448056 ANAPC13Q9BS18 74 aa3.64□□□□□ -1.83
AC004540.1-206ENST00000448056 KRTAP9-8Q9BYQ0 159 aa3.63□□□□□ -1.83
AC004540.1-206ENST00000448056 S4R3F8 94 aa3.63□□□□□ -1.83
AC004540.1-206ENST00000448056 LCA10Q71F78 164 aa3.62□□□□□ -1.83
AC004540.1-206ENST00000448056 DMAC1Q96GE9 116 aa3.62□□□□□ -1.83
AC004540.1-206ENST00000448056 CSAG1Q6PB30 78 aa3.6□□□□□ -1.83
AC004540.1-206ENST00000448056 SPANXA2-OT1Q8N9U9 137 aa3.59□□□□□ -1.83
AC004540.1-206ENST00000448056 NDUFC1O43677 76 aa3.58□□□□□ -1.84
AC004540.1-206ENST00000448056 ACYP2P14621 99 aa3.58□□□□□ -1.84
AC004540.1-206ENST00000448056 CYSTM1Q9H1C7 97 aa3.58□□□□□ -1.84
AC004540.1-206ENST00000448056 CCDC179H3BU77 68 aa3.57□□□□□ -1.84
AC004540.1-206ENST00000448056 MT2AP02795 61 aa3.57□□□□□ -1.84
AC004540.1-206ENST00000448056 H7BZZ5 65 aa3.56□□□□□ -1.84
AC004540.1-206ENST00000448056 MT1FP04733 61 aa3.54□□□□□ -1.84
AC004540.1-206ENST00000448056 KRTAP10-10P60014 251 aa3.54□□□□□ -1.84
AC004540.1-206ENST00000448056 CRCT1Q9UGL9 99 aa3.54□□□□□ -1.84
AC004540.1-206ENST00000448056 CHKB-CPT1BH3BT56 60 aa3.5□□□□□ -1.85
AC004540.1-206ENST00000448056 FSIP2Q5CZC0 6907 aa3.5□□□□□ -1.85
AC004540.1-206ENST00000448056 H0YAA0 97 aa3.49□□□□□ -1.85
AC004540.1-206ENST00000448056 SPTSSBQ8NFR3 76 aa3.49□□□□□ -1.85
AC004540.1-206ENST00000448056 COA5Q86WW8 74 aa3.47□□□□□ -1.85
AC004540.1-206ENST00000448056 KRTAP2-2Q9BYT5 123 aa3.47□□□□□ -1.85
AC004540.1-206ENST00000448056 ADM2Q7Z4H4 148 aa3.46□□□□□ -1.86
AC004540.1-206ENST00000448056 SEC61GP60059 68 aa3.45□□□□□ -1.86
AC004540.1-206ENST00000448056 ATP5EP56381 51 aaPredicted RBP3.44□□□□□ -1.86
AC004540.1-206ENST00000448056 TMEM258P61165 79 aa3.43□□□□□ -1.86
AC004540.1-206ENST00000448056 MT3P25713 68 aa3.42□□□□□ -1.86
AC004540.1-206ENST00000448056 CRIPTQ9P021 101 aa3.42□□□□□ -1.86
AC004540.1-206ENST00000448056 P0C880 135 aa3.41□□□□□ -1.86
AC004540.1-206ENST00000448056 PRAC1Q96KF2 57 aa3.4□□□□□ -1.87
AC004540.1-206ENST00000448056 SPRR2GQ9BYE4 73 aa3.4□□□□□ -1.87
AC004540.1-206ENST00000448056 USH2AO75445 5202 aa3.36□□□□□ -1.87
AC004540.1-206ENST00000448056 KRTAP19-8Q3LI54 63 aa3.34□□□□□ -1.87
AC004540.1-206ENST00000448056 SERP1Q9Y6X1 66 aa3.34□□□□□ -1.87
AC004540.1-206ENST00000448056 R4GN34 69 aa3.34□□□□□ -1.87
AC004540.1-206ENST00000448056 M0QZ58 72 aa3.32□□□□□ -1.88
AC004540.1-206ENST00000448056 Q5VV11 94 aa3.32□□□□□ -1.88
AC004540.1-206ENST00000448056 MT1BP07438 61 aa3.31□□□□□ -1.88
AC004540.1-206ENST00000448056 A0A1B0GU69 56 aa3.29□□□□□ -1.88
AC004540.1-206ENST00000448056 LINC01558Q9Y6Z2 57 aa3.29□□□□□ -1.88
AC004540.1-206ENST00000448056 SSPOA2VEC9 5147 aa3.29□□□□□ -1.88
AC004540.1-206ENST00000448056 A0A1B0GU33 70 aa3.28□□□□□ -1.88
AC004540.1-206ENST00000448056 LINC01554Q52M75 96 aa3.27□□□□□ -1.89
AC004540.1-206ENST00000448056 RPS28P62857 69 aaKnown RBP3.26□□□□□ -1.89
AC004540.1-206ENST00000448056 KRTAP19-6Q3LI70 58 aa3.26□□□□□ -1.89
AC004540.1-206ENST00000448056 KRTAP13-4Q3LI77 160 aa3.26□□□□□ -1.89
AC004540.1-206ENST00000448056 PRR15LQ9BU68 103 aa3.25□□□□□ -1.89
AC004540.1-206ENST00000448056 FCGBPQ9Y6R7 5405 aaPredicted RBP3.24□□□□□ -1.89
AC004540.1-206ENST00000448056 PLAC4Q8WY50 150 aa3.24□□□□□ -1.89
AC004540.1-206ENST00000448056 SPATA8Q6RVD6 105 aa3.23□□□□□ -1.89
AC004540.1-206ENST00000448056 SMIM26A0A096LP01 95 aa3.22□□□□□ -1.89
AC004540.1-206ENST00000448056 Q1T7F1 81 aa3.22□□□□□ -1.89
AC004540.1-206ENST00000448056 V9GYY9 64 aa3.22□□□□□ -1.89
AC004540.1-206ENST00000448056 A6NN06 94 aa3.21□□□□□ -1.9
AC004540.1-206ENST00000448056 A0A0D9SG42 100 aa3.19□□□□□ -1.9
AC004540.1-206ENST00000448056 KRTAP10-5P60370 271 aa3.19□□□□□ -1.9
AC004540.1-206ENST00000448056 PSPHP1O15172 72 aa3.17□□□□□ -1.9
AC004540.1-206ENST00000448056 UQCR11O14957 56 aa3.16□□□□□ -1.9
AC004540.1-206ENST00000448056 MT1XP80297 61 aa3.16□□□□□ -1.9
AC004540.1-206ENST00000448056 A8MU10 97 aa3.15□□□□□ -1.91
AC004540.1-206ENST00000448056 PRO2289Q9P1D8 64 aa3.15□□□□□ -1.91
AC004540.1-206ENST00000448056 NDUFAF8A1L188 74 aa3.13□□□□□ -1.91
AC004540.1-206ENST00000448056 KRTAP12-1P59990 96 aa3.13□□□□□ -1.91
AC004540.1-206ENST00000448056 KRTAP10-7P60409 375 aaPredicted RBP3.12□□□□□ -1.91
AC004540.1-206ENST00000448056 LCE1FQ5T754 118 aa3.12□□□□□ -1.91
AC004540.1-206ENST00000448056 SPINT4Q6UDR6 99 aa3.12□□□□□ -1.91
AC004540.1-206ENST00000448056 MACF1Q9UPN3 7388 aaKnown RBP3.11□□□□□ -1.91
AC004540.1-206ENST00000448056 KRTAP12-2P59991 146 aa3.11□□□□□ -1.91
AC004540.1-206ENST00000448056 MIR22HGQ0VDD5 57 aa3.11□□□□□ -1.91
AC004540.1-206ENST00000448056 CAMK2N1Q7Z7J9 78 aa3.1□□□□□ -1.91
AC004540.1-206ENST00000448056 SYNE2Q8WXH0 6885 aaKnown RBP3.09□□□□□ -1.92
AC004540.1-206ENST00000448056 LCE1EQ5T753 118 aa3.07□□□□□ -1.92
AC004540.1-206ENST00000448056 A6NED7 52 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms