RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 MT-ATP8P03928 68 aa6.77□□□□□ -1.33
HDAC4-204ENST00000446876 SCGB1A1P11684 91 aa6.77□□□□□ -1.33
HDAC4-204ENST00000446876 K7ERU9 68 aa6.75□□□□□ -1.33
HDAC4-204ENST00000446876 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.73□□□□□ -1.33
HDAC4-204ENST00000446876 KRTAP19-6Q3LI70 58 aa6.73□□□□□ -1.33
HDAC4-204ENST00000446876 A8MUN3 132 aa6.71□□□□□ -1.34
HDAC4-204ENST00000446876 H3BPC8 53 aa6.7□□□□□ -1.34
HDAC4-204ENST00000446876 NDUFC1O43677 76 aa6.7□□□□□ -1.34
HDAC4-204ENST00000446876 IMUPQ9GZP8 106 aa6.7□□□□□ -1.34
HDAC4-204ENST00000446876 SPRR2GQ9BYE4 73 aa6.66□□□□□ -1.34
HDAC4-204ENST00000446876 MT1BP07438 61 aa6.63□□□□□ -1.35
HDAC4-204ENST00000446876 TRAV7A0A075B6U4 112 aa6.61□□□□□ -1.35
HDAC4-204ENST00000446876 KRTAP19-8Q3LI54 63 aa6.61□□□□□ -1.35
HDAC4-204ENST00000446876 DMAC1Q96GE9 116 aa6.61□□□□□ -1.35
HDAC4-204ENST00000446876 KRTAP9-7A8MTY7 169 aa6.6□□□□□ -1.35
HDAC4-204ENST00000446876 Q5VV11 94 aa6.6□□□□□ -1.35
HDAC4-204ENST00000446876 H0YAA0 97 aa6.59□□□□□ -1.35
HDAC4-204ENST00000446876 ADM2Q7Z4H4 148 aa6.58□□□□□ -1.36
HDAC4-204ENST00000446876 SMIM20Q8N5G0 67 aa6.58□□□□□ -1.36
HDAC4-204ENST00000446876 CRIPTQ9P021 101 aa6.55□□□□□ -1.36
HDAC4-204ENST00000446876 MACF1Q9UPN3 7388 aaKnown RBP6.55□□□□□ -1.36
HDAC4-204ENST00000446876 SNURFQ9Y675 71 aa6.51□□□□□ -1.37
HDAC4-204ENST00000446876 A6NN06 94 aa6.48□□□□□ -1.37
HDAC4-204ENST00000446876 SYNE2Q8WXH0 6885 aaKnown RBP6.48□□□□□ -1.37
HDAC4-204ENST00000446876 P0C880 135 aa6.46□□□□□ -1.38
HDAC4-204ENST00000446876 ACYP2P14621 99 aa6.44□□□□□ -1.38
HDAC4-204ENST00000446876 C20orf197Q8N268 126 aa6.43□□□□□ -1.38
HDAC4-204ENST00000446876 SERP2Q8N6R1 65 aa6.43□□□□□ -1.38
HDAC4-204ENST00000446876 KRTAP10-5P60370 271 aa6.42□□□□□ -1.38
HDAC4-204ENST00000446876 KRTAP3-2Q9BYR7 98 aa6.42□□□□□ -1.38
HDAC4-204ENST00000446876 R4GN34 69 aa6.37□□□□□ -1.39
HDAC4-204ENST00000446876 M0QZ58 72 aa6.36□□□□□ -1.39
HDAC4-204ENST00000446876 CHKB-CPT1BH3BT56 60 aa6.35□□□□□ -1.39
HDAC4-204ENST00000446876 SPANXA2-OT1Q8N9U9 137 aa6.34□□□□□ -1.39
HDAC4-204ENST00000446876 SPTSSBQ8NFR3 76 aa6.32□□□□□ -1.4
HDAC4-204ENST00000446876 KRTAP6-3Q3LI67 103 aa6.3□□□□□ -1.4
HDAC4-204ENST00000446876 LINC01554Q52M75 96 aa6.28□□□□□ -1.4
HDAC4-204ENST00000446876 COX7CP15954 63 aa6.27□□□□□ -1.41
HDAC4-204ENST00000446876 PLAC4Q8WY50 150 aa6.27□□□□□ -1.41
HDAC4-204ENST00000446876 MT1XP80297 61 aa6.25□□□□□ -1.41
HDAC4-204ENST00000446876 CYSTM1Q9H1C7 97 aa6.22□□□□□ -1.41
HDAC4-204ENST00000446876 COA5Q86WW8 74 aa6.21□□□□□ -1.42
HDAC4-204ENST00000446876 PRO2289Q9P1D8 64 aa6.19□□□□□ -1.42
HDAC4-204ENST00000446876 H7BZZ5 65 aa6.16□□□□□ -1.42
HDAC4-204ENST00000446876 ANAPC13Q9BS18 74 aa6.12□□□□□ -1.43
HDAC4-204ENST00000446876 KRTAP13-4Q3LI77 160 aa6.11□□□□□ -1.43
HDAC4-204ENST00000446876 MUC12Q9UKN1 5478 aa6.11□□□□□ -1.43
HDAC4-204ENST00000446876 KMT2DO14686 5537 aa6.1□□□□□ -1.43
HDAC4-204ENST00000446876 NEBP20929 6669 aa6.09□□□□□ -1.43
HDAC4-204ENST00000446876 KRTAP5-9P26371 169 aa6.07□□□□□ -1.44
HDAC4-204ENST00000446876 CCDC179H3BU77 68 aa6.03□□□□□ -1.44
HDAC4-204ENST00000446876 KRTAP12-2P59991 146 aa6.02□□□□□ -1.45
HDAC4-204ENST00000446876 SEC61GP60059 68 aa5.99□□□□□ -1.45
HDAC4-204ENST00000446876 SERP1Q9Y6X1 66 aa5.99□□□□□ -1.45
HDAC4-204ENST00000446876 KRTAP10-7P60409 375 aaPredicted RBP5.98□□□□□ -1.45
HDAC4-204ENST00000446876 KRTAP8-1Q8IUC2 63 aa5.96□□□□□ -1.46
HDAC4-204ENST00000446876 KRTAP4-8A0A0G2JLE6 195 aa5.95□□□□□ -1.46
HDAC4-204ENST00000446876 SPRR2FQ96RM1 72 aa5.95□□□□□ -1.46
HDAC4-204ENST00000446876 KRTAP4-8Q9BYQ9 185 aa5.95□□□□□ -1.46
HDAC4-204ENST00000446876 MDN1Q9NU22 5596 aa5.95□□□□□ -1.46
HDAC4-204ENST00000446876 A0A0D9SG42 100 aa5.93□□□□□ -1.46
HDAC4-204ENST00000446876 SPATA8Q6RVD6 105 aa5.93□□□□□ -1.46
HDAC4-204ENST00000446876 KRTAP10-12P60413 245 aa5.91□□□□□ -1.46
HDAC4-204ENST00000446876 A0A1B0GU33 70 aa5.9□□□□□ -1.46
HDAC4-204ENST00000446876 CAMK2N1Q7Z7J9 78 aa5.89□□□□□ -1.47
HDAC4-204ENST00000446876 A0A1B0GU69 56 aa5.86□□□□□ -1.47
HDAC4-204ENST00000446876 ATP5EP56381 51 aaPredicted RBP5.84□□□□□ -1.47
HDAC4-204ENST00000446876 SPRR2EP22531 72 aa5.83□□□□□ -1.48
HDAC4-204ENST00000446876 SPRR2BP35325 72 aa5.83□□□□□ -1.48
HDAC4-204ENST00000446876 SPRR2AP35326 72 aa5.83□□□□□ -1.48
HDAC4-204ENST00000446876 SPINT4Q6UDR6 99 aa5.81□□□□□ -1.48
HDAC4-204ENST00000446876 KRTAP12-1P59990 96 aa5.79□□□□□ -1.48
HDAC4-204ENST00000446876 KRTAP20-1Q3LI63 56 aa5.79□□□□□ -1.48
HDAC4-204ENST00000446876 LCE1AQ5T7P2 110 aa5.76□□□□□ -1.49
HDAC4-204ENST00000446876 A8MU10 97 aa5.75□□□□□ -1.49
HDAC4-204ENST00000446876 TMEM258P61165 79 aa5.75□□□□□ -1.49
HDAC4-204ENST00000446876 SMIM26A0A096LP01 95 aa5.72□□□□□ -1.49
HDAC4-204ENST00000446876 PRR15LQ9BU68 103 aa5.69□□□□□ -1.5
HDAC4-204ENST00000446876 LINC01558Q9Y6Z2 57 aa5.69□□□□□ -1.5
HDAC4-204ENST00000446876 KRTAP2-3P0C7H8 128 aa5.65□□□□□ -1.5
HDAC4-204ENST00000446876 KRTAP2-4Q9BYR9 128 aa5.65□□□□□ -1.5
HDAC4-204ENST00000446876 SPRR2DP22532 72 aa5.64□□□□□ -1.51
HDAC4-204ENST00000446876 KRTAP19-7Q3SYF9 63 aa5.58□□□□□ -1.52
HDAC4-204ENST00000446876 C10orf95Q9H7T3 257 aa5.54□□□□□ -1.52
HDAC4-204ENST00000446876 MT1EP04732 61 aa5.52□□□□□ -1.53
HDAC4-204ENST00000446876 UQCR11O14957 56 aa5.51□□□□□ -1.53
HDAC4-204ENST00000446876 KRTAP19-5Q3LI72 72 aa5.48□□□□□ -1.53
HDAC4-204ENST00000446876 KRTAP2-2Q9BYT5 123 aa5.48□□□□□ -1.53
HDAC4-204ENST00000446876 KRTAP2-1Q9BYU5 128 aa5.48□□□□□ -1.53
HDAC4-204ENST00000446876 LCE3BQ5TA77 95 aa5.47□□□□□ -1.53
HDAC4-204ENST00000446876 TNP1P09430 55 aa5.44□□□□□ -1.54
HDAC4-204ENST00000446876 PSPHP1O15172 72 aa5.43□□□□□ -1.54
HDAC4-204ENST00000446876 LCE3AQ5TA76 89 aa5.43□□□□□ -1.54
HDAC4-204ENST00000446876 KRTAP19-3Q7Z4W3 81 aa5.43□□□□□ -1.54
HDAC4-204ENST00000446876 MIR22HGQ0VDD5 57 aa5.42□□□□□ -1.54
HDAC4-204ENST00000446876 LCE5AQ5TCM9 118 aa5.42□□□□□ -1.54
HDAC4-204ENST00000446876 Q1T7F1 81 aa5.38□□□□□ -1.55
HDAC4-204ENST00000446876 V9GYY9 64 aa5.38□□□□□ -1.55
HDAC4-204ENST00000446876 MT1LQ93083 61 aa5.3□□□□□ -1.56
HDAC4-204ENST00000446876 MT1GP13640 62 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 9311.1 ms