RNA–Protein interactions for RNA: ENST00000446579.1

LINC00440-201, long intergenic non-protein coding RNA 440, humanhuman

TSL 5 BASIC

Gene LINC00440, Length 734 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00440-201ENST00000446579 HUWE1Q7Z6Z7 4374 aaKnown RBP0.82□□□□□ -2.28
LINC00440-201ENST00000446579 DNAH8Q96JB1 4490 aa0.82□□□□□ -2.28
LINC00440-201ENST00000446579 TLN2Q9Y4G6 2542 aa0.82□□□□□ -2.28
LINC00440-201ENST00000446579 AKAP6Q13023 2319 aa0.82□□□□□ -2.28
LINC00440-201ENST00000446579 ABCA12Q86UK0 2595 aa0.82□□□□□ -2.28
LINC00440-201ENST00000446579 ANK2Q01484 3957 aa0.82□□□□□ -2.28
LINC00440-201ENST00000446579 LYSTQ99698 3801 aa0.82□□□□□ -2.28
LINC00440-201ENST00000446579 RIF1Q5UIP0 2472 aaKnown RBP0.82□□□□□ -2.28
LINC00440-201ENST00000446579 VPS13DQ5THJ4 4388 aa0.82□□□□□ -2.28
LINC00440-201ENST00000446579 CENPEQ02224 2701 aa0.82□□□□□ -2.28
LINC00440-201ENST00000446579 DNAH2Q9P225 4427 aa0.82□□□□□ -2.28
LINC00440-201ENST00000446579 MYO9AB2RTY4 2548 aa0.82□□□□□ -2.28
LINC00440-201ENST00000446579 USP9YO00507 2555 aaPredicted RBP0.82□□□□□ -2.28
LINC00440-201ENST00000446579 MYO18BQ8IUG5 2567 aa0.82□□□□□ -2.28
LINC00440-201ENST00000446579 TRRAPQ9Y4A5 3859 aa0.82□□□□□ -2.28
LINC00440-201ENST00000446579 ALMS1Q8TCU4 4167 aa0.82□□□□□ -2.28
LINC00440-201ENST00000446579 FLNCQ14315 2725 aa0.81□□□□□ -2.28
LINC00440-201ENST00000446579 PKD1L2Q7Z442 2459 aa0.81□□□□□ -2.28
LINC00440-201ENST00000446579 TEX15Q9BXT5 2789 aa0.81□□□□□ -2.28
LINC00440-201ENST00000446579 DNAH3Q8TD57 4116 aa0.81□□□□□ -2.28
LINC00440-201ENST00000446579 PLECQ15149 4684 aaKnown RBP0.81□□□□□ -2.28
LINC00440-201ENST00000446579 POLQO75417 2590 aa0.81□□□□□ -2.28
LINC00440-201ENST00000446579 DNAH17Q9UFH2 4485 aa0.81□□□□□ -2.28
LINC00440-201ENST00000446579 PCNX1Q96RV3 2341 aa0.81□□□□□ -2.28
LINC00440-201ENST00000446579 IGSF10Q6WRI0 2623 aa0.81□□□□□ -2.28
LINC00440-201ENST00000446579 ITPR3Q14573 2671 aa0.81□□□□□ -2.28
LINC00440-201ENST00000446579 GCN1Q92616 2671 aaKnown RBP0.81□□□□□ -2.28
LINC00440-201ENST00000446579 TENM3Q9P273 2699 aa0.81□□□□□ -2.28
LINC00440-201ENST00000446579 C9orf92A6NGG3 77 aa0.81□□□□□ -2.28
LINC00440-201ENST00000446579 M0QZ58 72 aa0.81□□□□□ -2.28
LINC00440-201ENST00000446579 S4R3F8 94 aa0.81□□□□□ -2.28
LINC00440-201ENST00000446579 NCOR2Q9Y618 2525 aa0.81□□□□□ -2.28
LINC00440-201ENST00000446579 NF1P21359 2839 aa0.81□□□□□ -2.28
LINC00440-201ENST00000446579 ZANQ9Y493 2812 aa0.81□□□□□ -2.28
LINC00440-201ENST00000446579 USP9XQ93008 2570 aaPredicted RBP0.81□□□□□ -2.28
LINC00440-201ENST00000446579 NBASA2RRP1 2371 aa0.81□□□□□ -2.28
LINC00440-201ENST00000446579 ACACBO00763 2458 aa0.8□□□□□ -2.28
LINC00440-201ENST00000446579 DNAH9Q9NYC9 4486 aa0.8□□□□□ -2.28
LINC00440-201ENST00000446579 CSPG4Q6UVK1 2322 aa0.8□□□□□ -2.28
LINC00440-201ENST00000446579 HIVEP3Q5T1R4 2406 aa0.79□□□□□ -2.28
LINC00440-201ENST00000446579 LRRK2Q5S007 2527 aa0.79□□□□□ -2.28
LINC00440-201ENST00000446579 PDZD2O15018 2839 aa0.79□□□□□ -2.28
LINC00440-201ENST00000446579 OTOGQ6ZRI0 2925 aa0.79□□□□□ -2.28
LINC00440-201ENST00000446579 DNAH11Q96DT5 4516 aa0.79□□□□□ -2.28
LINC00440-201ENST00000446579 FRAS1Q86XX4 4008 aa0.79□□□□□ -2.28
LINC00440-201ENST00000446579 SACSQ9NZJ4 4579 aa0.79□□□□□ -2.28
LINC00440-201ENST00000446579 CACNA1AO00555 2505 aa0.79□□□□□ -2.28
LINC00440-201ENST00000446579 CHD8Q9HCK8 2581 aa0.79□□□□□ -2.28
LINC00440-201ENST00000446579 FLNAP21333 2647 aaKnown RBP0.79□□□□□ -2.28
LINC00440-201ENST00000446579 CMYA5Q8N3K9 4069 aa0.79□□□□□ -2.28
LINC00440-201ENST00000446579 VWFP04275 2813 aa0.79□□□□□ -2.28
LINC00440-201ENST00000446579 PTPN13Q12923 2485 aa0.78□□□□□ -2.28
LINC00440-201ENST00000446579 PIEZO1Q92508 2521 aa0.78□□□□□ -2.28
LINC00440-201ENST00000446579 HECTD4Q9Y4D8 3996 aa0.78□□□□□ -2.28
LINC00440-201ENST00000446579 UNC79Q9P2D8 2635 aa0.78□□□□□ -2.28
LINC00440-201ENST00000446579 LRP1BQ9NZR2 4599 aa0.78□□□□□ -2.28
LINC00440-201ENST00000446579 CSMD3Q7Z407 3707 aa0.78□□□□□ -2.29
LINC00440-201ENST00000446579 HIVEP1P15822 2718 aa0.78□□□□□ -2.29
LINC00440-201ENST00000446579 TENM4Q6N022 2769 aa0.78□□□□□ -2.29
LINC00440-201ENST00000446579 PRKDCP78527 4128 aaKnown RBP0.77□□□□□ -2.29
LINC00440-201ENST00000446579 ZFYVE26Q68DK2 2539 aa0.77□□□□□ -2.29
LINC00440-201ENST00000446579 SPTBN4Q9H254 2564 aa0.77□□□□□ -2.29
LINC00440-201ENST00000446579 TEP1Q99973 2627 aaKnown RBP0.77□□□□□ -2.29
LINC00440-201ENST00000446579 DNAH5Q8TE73 4624 aa0.77□□□□□ -2.29
LINC00440-201ENST00000446579 CCDC168Q8NDH2 2452 aa0.77□□□□□ -2.29
LINC00440-201ENST00000446579 DNAH7Q8WXX0 4024 aa0.77□□□□□ -2.29
LINC00440-201ENST00000446579 SRRM2Q9UQ35 2752 aaKnown RBP0.76□□□□□ -2.29
LINC00440-201ENST00000446579 MAST4O15021 2626 aa0.76□□□□□ -2.29
LINC00440-201ENST00000446579 F8P00451 2351 aa0.76□□□□□ -2.29
LINC00440-201ENST00000446579 NSD1Q96L73 2696 aaPredicted RBP0.76□□□□□ -2.29
LINC00440-201ENST00000446579 HECTD1Q9ULT8 2610 aa0.76□□□□□ -2.29
LINC00440-201ENST00000446579 SETD2Q9BYW2 2564 aaPredicted RBP0.76□□□□□ -2.29
LINC00440-201ENST00000446579 SONP18583 2426 aaKnown RBP0.76□□□□□ -2.29
LINC00440-201ENST00000446579 MTORP42345 2549 aa0.75□□□□□ -2.29
LINC00440-201ENST00000446579 SMR3BP02814 79 aaPredicted RBP0.75□□□□□ -2.29
LINC00440-201ENST00000446579 DNAH6Q9C0G6 4158 aa0.75□□□□□ -2.29
LINC00440-201ENST00000446579 ATRQ13535 2644 aa0.75□□□□□ -2.29
LINC00440-201ENST00000446579 USP24Q9UPU5 2620 aa0.75□□□□□ -2.29
LINC00440-201ENST00000446579 STARD9Q9P2P6 4700 aa0.75□□□□□ -2.29
LINC00440-201ENST00000446579 TENM2Q9NT68 2774 aa0.74□□□□□ -2.29
LINC00440-201ENST00000446579 FAT2Q9NYQ8 4349 aa0.74□□□□□ -2.29
LINC00440-201ENST00000446579 FASNP49327 2511 aaKnown RBP0.74□□□□□ -2.29
LINC00440-201ENST00000446579 MYCBP2O75592 4640 aa0.74□□□□□ -2.29
LINC00440-201ENST00000446579 PKD1L1Q8TDX9 2849 aa0.74□□□□□ -2.29
LINC00440-201ENST00000446579 FAT3Q8TDW7 4589 aa0.74□□□□□ -2.29
LINC00440-201ENST00000446579 APOBP04114 4563 aaKnown RBP0.74□□□□□ -2.29
LINC00440-201ENST00000446579 FLNBO75369 2602 aaKnown RBP0.73□□□□□ -2.29
LINC00440-201ENST00000446579 KMT2AQ03164 3969 aa0.73□□□□□ -2.29
LINC00440-201ENST00000446579 PKD1P98161 4303 aa0.73□□□□□ -2.29
LINC00440-201ENST00000446579 DYNC1H1Q14204 4646 aaKnown RBP0.73□□□□□ -2.29
LINC00440-201ENST00000446579 PKHD1L1Q86WI1 4243 aa0.73□□□□□ -2.29
LINC00440-201ENST00000446579 ITPR2Q14571 2701 aa0.73□□□□□ -2.29
LINC00440-201ENST00000446579 VPS13BQ7Z7G8 4022 aa0.73□□□□□ -2.29
LINC00440-201ENST00000446579 PKHD1P08F94 4074 aa0.73□□□□□ -2.29
LINC00440-201ENST00000446579 ACANP16112 2415 aa0.72□□□□□ -2.29
LINC00440-201ENST00000446579 TNP1P09430 55 aa0.72□□□□□ -2.29
LINC00440-201ENST00000446579 HSPG2P98160 4391 aa0.72□□□□□ -2.29
LINC00440-201ENST00000446579 NBEAL1Q6ZS30 2694 aa0.72□□□□□ -2.29
LINC00440-201ENST00000446579 HYDINQ4G0P3 5121 aa0.72□□□□□ -2.29
LINC00440-201ENST00000446579 TGP01266 2768 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms