RNA–Protein interactions for RNA: ENST00000446501.6

BRF1-206, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2 BASIC

Gene BRF1, Length 2,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-206ENST00000446501 K7ERS5 55 aa8.69□□□□□ -1.02
BRF1-206ENST00000446501 FAT3Q8TDW7 4589 aa8.69□□□□□ -1.02
BRF1-206ENST00000446501 KRTAP3-1Q9BYR8 98 aa8.68□□□□□ -1.02
BRF1-206ENST00000446501 TNXBP22105 4242 aa8.68□□□□□ -1.02
BRF1-206ENST00000446501 C20orf166-AS1Q96NR2 134 aa8.67□□□□□ -1.02
BRF1-206ENST00000446501 P0C880 135 aa8.65□□□□□ -1.02
BRF1-206ENST00000446501 KIAA1109Q2LD37 5005 aa8.63□□□□□ -1.03
BRF1-206ENST00000446501 COX6B2Q6YFQ2 88 aa8.62□□□□□ -1.03
BRF1-206ENST00000446501 KRTAP17-1Q9BYP8 105 aa8.61□□□□□ -1.03
BRF1-206ENST00000446501 Q5VSD8 79 aa8.61□□□□□ -1.03
BRF1-206ENST00000446501 RYR1P21817 5038 aa8.58□□□□□ -1.04
BRF1-206ENST00000446501 A0A0D9SG42 100 aa8.55□□□□□ -1.04
BRF1-206ENST00000446501 SPINT4Q6UDR6 99 aa8.55□□□□□ -1.04
BRF1-206ENST00000446501 KRTAP10-8P60410 259 aa8.52□□□□□ -1.04
BRF1-206ENST00000446501 EPPK1P58107 5090 aaKnown RBP8.47□□□□□ -1.05
BRF1-206ENST00000446501 C10orf95Q9H7T3 257 aa8.46□□□□□ -1.05
BRF1-206ENST00000446501 TPRXLQ17RH7 258 aa8.45□□□□□ -1.06
BRF1-206ENST00000446501 RPL37P61927 97 aaKnown RBP8.45□□□□□ -1.06
BRF1-206ENST00000446501 LPAP08519 4548 aa8.42□□□□□ -1.06
BRF1-206ENST00000446501 KRTAP13-4Q3LI77 160 aa8.41□□□□□ -1.06
BRF1-206ENST00000446501 XP32Q5T750 250 aa8.37□□□□□ -1.07
BRF1-206ENST00000446501 NDUFAF8A1L188 74 aa8.37□□□□□ -1.07
BRF1-206ENST00000446501 KRTAP10-6P60371 365 aaPredicted RBP8.34□□□□□ -1.07
BRF1-206ENST00000446501 LRP2P98164 4655 aa8.34□□□□□ -1.07
BRF1-206ENST00000446501 MT1HL1P0DM35 61 aa8.34□□□□□ -1.07
BRF1-206ENST00000446501 ABCA13Q86UQ4 5058 aa8.3□□□□□ -1.08
BRF1-206ENST00000446501 KRTAP3-3Q9BYR6 98 aa8.25□□□□□ -1.09
BRF1-206ENST00000446501 KRTAP3-2Q9BYR7 98 aa8.23□□□□□ -1.09
BRF1-206ENST00000446501 KRTAP15-1Q3LI76 137 aa8.22□□□□□ -1.09
BRF1-206ENST00000446501 KRTAP4-5Q9BYR2 181 aa8.2□□□□□ -1.1
BRF1-206ENST00000446501 S4R3F8 94 aa8.2□□□□□ -1.1
BRF1-206ENST00000446501 KRTAP12-2P59991 146 aa8.19□□□□□ -1.1
BRF1-206ENST00000446501 KRTAP12-1P59990 96 aa8.04□□□□□ -1.12
BRF1-206ENST00000446501 HERC2O95714 4834 aa7.97□□□□□ -1.13
BRF1-206ENST00000446501 MUC2Q02817 5179 aa7.88□□□□□ -1.15
BRF1-206ENST00000446501 MUC17Q685J3 4493 aa7.85□□□□□ -1.15
BRF1-206ENST00000446501 J3QL48 77 aa7.83□□□□□ -1.16
BRF1-206ENST00000446501 KRTAP4-1Q9BYQ7 146 aa7.81□□□□□ -1.16
BRF1-206ENST00000446501 M0QZ58 72 aa7.79□□□□□ -1.16
BRF1-206ENST00000446501 SEC61BP60468 96 aaKnown RBP7.73□□□□□ -1.17
BRF1-206ENST00000446501 A0A0A0MQY5 61 aa7.72□□□□□ -1.17
BRF1-206ENST00000446501 HERC1Q15751 4861 aa7.72□□□□□ -1.17
BRF1-206ENST00000446501 PLAC4Q8WY50 150 aa7.72□□□□□ -1.17
BRF1-206ENST00000446501 R4GN34 69 aa7.67□□□□□ -1.18
BRF1-206ENST00000446501 LUZP6Q538Z0 58 aa7.65□□□□□ -1.18
BRF1-206ENST00000446501 BIRC6Q9NR09 4857 aa7.65□□□□□ -1.18
BRF1-206ENST00000446501 PCLOQ9Y6V0 5065 aa7.63□□□□□ -1.19
BRF1-206ENST00000446501 LORP23490 312 aaPredicted RBP7.62□□□□□ -1.19
BRF1-206ENST00000446501 KRTAP19-2Q3LHN2 52 aa7.55□□□□□ -1.2
BRF1-206ENST00000446501 FAT4Q6V0I7 4981 aa7.5□□□□□ -1.21
BRF1-206ENST00000446501 HMCN2Q8NDA2 5059 aa7.48□□□□□ -1.21
BRF1-206ENST00000446501 FLGP20930 4061 aaPredicted RBP7.4□□□□□ -1.22
BRF1-206ENST00000446501 CAMK2N1Q7Z7J9 78 aa7.38□□□□□ -1.23
BRF1-206ENST00000446501 RNF213Q63HN8 5207 aa7.38□□□□□ -1.23
BRF1-206ENST00000446501 UBR4Q5T4S7 5183 aa7.3□□□□□ -1.24
BRF1-206ENST00000446501 PP632Q6XCG6 107 aa7.28□□□□□ -1.24
BRF1-206ENST00000446501 LCE2CQ5TA81 110 aa7.18□□□□□ -1.26
BRF1-206ENST00000446501 M0R2T5 61 aa7.08□□□□□ -1.28
BRF1-206ENST00000446501 TNP1P09430 55 aa7.05□□□□□ -1.28
BRF1-206ENST00000446501 MT1HP80294 61 aa6.99□□□□□ -1.29
BRF1-206ENST00000446501 KRTAP19-1Q8IUB9 90 aa6.93□□□□□ -1.3
BRF1-206ENST00000446501 SPRR5A0A1B0GTR4 108 aa6.92□□□□□ -1.3
BRF1-206ENST00000446501 MT1FP04733 61 aa6.88□□□□□ -1.31
BRF1-206ENST00000446501 KRTAP10-10P60014 251 aa6.87□□□□□ -1.31
BRF1-206ENST00000446501 SPRR2GQ9BYE4 73 aa6.87□□□□□ -1.31
BRF1-206ENST00000446501 MT2AP02795 61 aa6.85□□□□□ -1.31
BRF1-206ENST00000446501 KRTAP9-8Q9BYQ0 159 aa6.81□□□□□ -1.32
BRF1-206ENST00000446501 KRTAP23-1A1A580 65 aa6.79□□□□□ -1.32
BRF1-206ENST00000446501 LCE3AQ5TA76 89 aa6.67□□□□□ -1.34
BRF1-206ENST00000446501 PRO2289Q9P1D8 64 aa6.66□□□□□ -1.34
BRF1-206ENST00000446501 MT1BP07438 61 aa6.59□□□□□ -1.36
BRF1-206ENST00000446501 KRTAP19-8Q3LI54 63 aa6.56□□□□□ -1.36
BRF1-206ENST00000446501 USH2AO75445 5202 aa6.56□□□□□ -1.36
BRF1-206ENST00000446501 KRTAP10-5P60370 271 aa6.51□□□□□ -1.37
BRF1-206ENST00000446501 MT1XP80297 61 aa6.51□□□□□ -1.37
BRF1-206ENST00000446501 KRTAP9-3Q9BYQ3 159 aa6.51□□□□□ -1.37
BRF1-206ENST00000446501 INE1O15225 51 aa6.47□□□□□ -1.37
BRF1-206ENST00000446501 KRTAP10-7P60409 375 aaPredicted RBP6.38□□□□□ -1.39
BRF1-206ENST00000446501 KMT2DO14686 5537 aa6.35□□□□□ -1.39
BRF1-206ENST00000446501 KRTAP8-1Q8IUC2 63 aa6.35□□□□□ -1.39
BRF1-206ENST00000446501 LCE2BO14633 110 aa6.34□□□□□ -1.39
BRF1-206ENST00000446501 KRTAP10-12P60413 245 aa6.32□□□□□ -1.4
BRF1-206ENST00000446501 KRTAP12-3P60328 96 aa6.29□□□□□ -1.4
BRF1-206ENST00000446501 LCE2AQ5TA79 106 aaPredicted RBP6.24□□□□□ -1.41
BRF1-206ENST00000446501 FSIP2Q5CZC0 6907 aa6.14□□□□□ -1.43
BRF1-206ENST00000446501 KRTAP4-8A0A0G2JLE6 195 aa6.08□□□□□ -1.44
BRF1-206ENST00000446501 KRTAP4-8Q9BYQ9 185 aa6.08□□□□□ -1.44
BRF1-206ENST00000446501 KRTAP19-5Q3LI72 72 aa6.06□□□□□ -1.44
BRF1-206ENST00000446501 SSPOA2VEC9 5147 aa5.95□□□□□ -1.46
BRF1-206ENST00000446501 LCE3CQ5T5A8 94 aa5.92□□□□□ -1.46
BRF1-206ENST00000446501 KRTAP9-6A8MVA2 160 aa5.81□□□□□ -1.48
BRF1-206ENST00000446501 KRTAP19-7Q3SYF9 63 aa5.8□□□□□ -1.48
BRF1-206ENST00000446501 KRTAP4-7Q9BYR0 210 aa5.79□□□□□ -1.48
BRF1-206ENST00000446501 FCGBPQ9Y6R7 5405 aaPredicted RBP5.66□□□□□ -1.5
BRF1-206ENST00000446501 MUC12Q9UKN1 5478 aa5.63□□□□□ -1.51
BRF1-206ENST00000446501 MT1EP04732 61 aa5.62□□□□□ -1.51
BRF1-206ENST00000446501 KRTAP2-3P0C7H8 128 aa5.62□□□□□ -1.51
BRF1-206ENST00000446501 KRTAP2-4Q9BYR9 128 aa5.62□□□□□ -1.51
BRF1-206ENST00000446501 KRTAP2-1Q9BYU5 128 aa5.62□□□□□ -1.51
BRF1-206ENST00000446501 KRTAP19-6Q3LI70 58 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms