RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 NDUFC1O43677 76 aa8.61□□□□□ -1.03
SGCE-206ENST00000445866 M0R2T5 61 aa8.59□□□□□ -1.03
SGCE-206ENST00000445866 H7BZZ5 65 aa8.56□□□□□ -1.04
SGCE-206ENST00000445866 A8MUN3 132 aa8.53□□□□□ -1.04
SGCE-206ENST00000445866 ATP5EP56381 51 aaPredicted RBP8.52□□□□□ -1.05
SGCE-206ENST00000445866 S4R3F8 94 aa8.49□□□□□ -1.05
SGCE-206ENST00000445866 DMAC1Q96GE9 116 aa8.48□□□□□ -1.05
SGCE-206ENST00000445866 SPANXA2-OT1Q8N9U9 137 aa8.47□□□□□ -1.05
SGCE-206ENST00000445866 SERP1Q9Y6X1 66 aa8.46□□□□□ -1.05
SGCE-206ENST00000445866 ACYP2P14621 99 aa8.43□□□□□ -1.06
SGCE-206ENST00000445866 LCA10Q71F78 164 aa8.43□□□□□ -1.06
SGCE-206ENST00000445866 SVIPQ8NHG7 77 aa8.43□□□□□ -1.06
SGCE-206ENST00000445866 KRTAP10-6P60371 365 aaPredicted RBP8.38□□□□□ -1.07
SGCE-206ENST00000445866 CSAG1Q6PB30 78 aa8.38□□□□□ -1.07
SGCE-206ENST00000445866 LORP23490 312 aaPredicted RBP8.33□□□□□ -1.08
SGCE-206ENST00000445866 SMIM26A0A096LP01 95 aa8.31□□□□□ -1.08
SGCE-206ENST00000445866 CHKB-CPT1BH3BT56 60 aa8.29□□□□□ -1.08
SGCE-206ENST00000445866 KRTAP4-8Q9BYQ9 185 aa8.29□□□□□ -1.08
SGCE-206ENST00000445866 KRTAP9-8Q9BYQ0 159 aa8.26□□□□□ -1.09
SGCE-206ENST00000445866 COA5Q86WW8 74 aa8.22□□□□□ -1.09
SGCE-206ENST00000445866 SPTSSBQ8NFR3 76 aa8.21□□□□□ -1.09
SGCE-206ENST00000445866 MT2AP02795 61 aa8.19□□□□□ -1.1
SGCE-206ENST00000445866 KRTAP10-10P60014 251 aa8.17□□□□□ -1.1
SGCE-206ENST00000445866 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.14□□□□□ -1.11
SGCE-206ENST00000445866 MT1FP04733 61 aa8.13□□□□□ -1.11
SGCE-206ENST00000445866 KRTAP9-2Q9BYQ4 174 aa8.11□□□□□ -1.11
SGCE-206ENST00000445866 KRTAP9-6A0A140TA67 174 aa8.08□□□□□ -1.12
SGCE-206ENST00000445866 H0YAA0 97 aa8.08□□□□□ -1.12
SGCE-206ENST00000445866 ADM2Q7Z4H4 148 aa8.08□□□□□ -1.12
SGCE-206ENST00000445866 Q1T7F1 81 aa8.05□□□□□ -1.12
SGCE-206ENST00000445866 V9GYY9 64 aa8.01□□□□□ -1.13
SGCE-206ENST00000445866 KRTAP9-3Q9BYQ3 159 aa7.98□□□□□ -1.13
SGCE-206ENST00000445866 PRO0628Q9UI54 55 aa7.96□□□□□ -1.13
SGCE-206ENST00000445866 P0C880 135 aa7.95□□□□□ -1.14
SGCE-206ENST00000445866 SEC61GP60059 68 aa7.91□□□□□ -1.14
SGCE-206ENST00000445866 CRIPTQ9P021 101 aa7.91□□□□□ -1.14
SGCE-206ENST00000445866 LCE3BQ5TA77 95 aa7.85□□□□□ -1.15
SGCE-206ENST00000445866 KRTAP19-1Q8IUB9 90 aa7.83□□□□□ -1.16
SGCE-206ENST00000445866 BRK1Q8WUW1 75 aa7.83□□□□□ -1.16
SGCE-206ENST00000445866 R4GN34 69 aa7.83□□□□□ -1.16
SGCE-206ENST00000445866 SPRR2GQ9BYE4 73 aa7.82□□□□□ -1.16
SGCE-206ENST00000445866 A0A1B0GU69 56 aa7.8□□□□□ -1.16
SGCE-206ENST00000445866 M0QZ58 72 aa7.78□□□□□ -1.16
SGCE-206ENST00000445866 PSPHP1O15172 72 aa7.78□□□□□ -1.16
SGCE-206ENST00000445866 Q5VV11 94 aa7.77□□□□□ -1.17
SGCE-206ENST00000445866 LINC01558Q9Y6Z2 57 aa7.77□□□□□ -1.17
SGCE-206ENST00000445866 KRTAP4-8A0A0G2JLE6 195 aa7.73□□□□□ -1.17
SGCE-206ENST00000445866 PRR15LQ9BU68 103 aa7.73□□□□□ -1.17
SGCE-206ENST00000445866 USH2AO75445 5202 aa7.72□□□□□ -1.17
SGCE-206ENST00000445866 A0A1B0GU33 70 aa7.71□□□□□ -1.18
SGCE-206ENST00000445866 KRTAP9-9Q9BYP9 154 aa7.7□□□□□ -1.18
SGCE-206ENST00000445866 KRTAP9-4Q9BYQ2 154 aa7.7□□□□□ -1.18
SGCE-206ENST00000445866 LINC01554Q52M75 96 aa7.68□□□□□ -1.18
SGCE-206ENST00000445866 KRTAP4-12Q9BQ66 201 aa7.68□□□□□ -1.18
SGCE-206ENST00000445866 KRTAP19-8Q3LI54 63 aa7.67□□□□□ -1.18
SGCE-206ENST00000445866 FSIP2Q5CZC0 6907 aa7.64□□□□□ -1.19
SGCE-206ENST00000445866 KRTAP13-4Q3LI77 160 aa7.63□□□□□ -1.19
SGCE-206ENST00000445866 MT1BP07438 61 aa7.6□□□□□ -1.19
SGCE-206ENST00000445866 SPATA8Q6RVD6 105 aa7.6□□□□□ -1.19
SGCE-206ENST00000445866 A6NED7 52 aa7.58□□□□□ -1.2
SGCE-206ENST00000445866 CDC42SE1Q9NRR8 79 aa7.57□□□□□ -1.2
SGCE-206ENST00000445866 CRCT1Q9UGL9 99 aa7.54□□□□□ -1.2
SGCE-206ENST00000445866 PLAC4Q8WY50 150 aa7.54□□□□□ -1.2
SGCE-206ENST00000445866 A0A0D9SG42 100 aa7.52□□□□□ -1.21
SGCE-206ENST00000445866 KRTAP4-7Q9BYR0 210 aa7.51□□□□□ -1.21
SGCE-206ENST00000445866 SSPOA2VEC9 5147 aa7.51□□□□□ -1.21
SGCE-206ENST00000445866 UQCR11O14957 56 aa7.5□□□□□ -1.21
SGCE-206ENST00000445866 A6NN06 94 aa7.46□□□□□ -1.22
SGCE-206ENST00000445866 A8MU10 97 aa7.46□□□□□ -1.22
SGCE-206ENST00000445866 KRTAP19-6Q3LI70 58 aa7.43□□□□□ -1.22
SGCE-206ENST00000445866 PMAIP1Q13794 54 aa7.42□□□□□ -1.22
SGCE-206ENST00000445866 MIR22HGQ0VDD5 57 aa7.38□□□□□ -1.23
SGCE-206ENST00000445866 SPINT4Q6UDR6 99 aa7.38□□□□□ -1.23
SGCE-206ENST00000445866 LCE1DQ5T752 114 aa7.34□□□□□ -1.23
SGCE-206ENST00000445866 KRTAP12-1P59990 96 aa7.33□□□□□ -1.24
SGCE-206ENST00000445866 FCGBPQ9Y6R7 5405 aaPredicted RBP7.31□□□□□ -1.24
SGCE-206ENST00000445866 KRTAP10-5P60370 271 aa7.31□□□□□ -1.24
SGCE-206ENST00000445866 KTN1-AS1Q86SY8 53 aa7.31□□□□□ -1.24
SGCE-206ENST00000445866 KRTAP12-2P59991 146 aa7.29□□□□□ -1.24
SGCE-206ENST00000445866 CAMK2N1Q7Z7J9 78 aa7.29□□□□□ -1.24
SGCE-206ENST00000445866 PRO2289Q9P1D8 64 aa7.28□□□□□ -1.24
SGCE-206ENST00000445866 MT1XP80297 61 aa7.26□□□□□ -1.25
SGCE-206ENST00000445866 KRTAP4-9Q9BYQ8 210 aa7.21□□□□□ -1.26
SGCE-206ENST00000445866 KRTAP4-2Q9BYR5 136 aa7.19□□□□□ -1.26
SGCE-206ENST00000445866 K7ERS5 55 aa7.15□□□□□ -1.27
SGCE-206ENST00000445866 C10orf95Q9H7T3 257 aa6.97□□□□□ -1.29
SGCE-206ENST00000445866 KRTAP10-7P60409 375 aaPredicted RBP6.96□□□□□ -1.29
SGCE-206ENST00000445866 MACF1Q9UPN3 7388 aaKnown RBP6.93□□□□□ -1.3
SGCE-206ENST00000445866 KRTAP10-12P60413 245 aa6.9□□□□□ -1.31
SGCE-206ENST00000445866 KRTAP5-3Q6L8H2 238 aa6.9□□□□□ -1.31
SGCE-206ENST00000445866 PRAC1Q96KF2 57 aa6.87□□□□□ -1.31
SGCE-206ENST00000445866 TNP1P09430 55 aa6.85□□□□□ -1.31
SGCE-206ENST00000445866 KRTAP4-11Q9BYQ6 195 aa6.85□□□□□ -1.31
SGCE-206ENST00000445866 KMT2DO14686 5537 aa6.83□□□□□ -1.32
SGCE-206ENST00000445866 ROMO1P60602 79 aa6.76□□□□□ -1.33
SGCE-206ENST00000445866 SYNE2Q8WXH0 6885 aaKnown RBP6.76□□□□□ -1.33
SGCE-206ENST00000445866 KRTAP8-1Q8IUC2 63 aa6.74□□□□□ -1.33
SGCE-206ENST00000445866 KRTAP9-7A8MTY7 169 aa6.73□□□□□ -1.33
SGCE-206ENST00000445866 KRTAP25-1Q3LHN0 102 aa6.72□□□□□ -1.33
SGCE-206ENST00000445866 KRTAP6-3Q3LI67 103 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms