RNA–Protein interactions for RNA: ENST00000445184.1

LINC01004-201, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 5 BASIC

Gene LINC01004, Length 686 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-201ENST00000445184 ROMO1P60602 79 aa1.78□□□□□ -2.12
LINC01004-201ENST00000445184 SPRR4Q96PI1 79 aa1.78□□□□□ -2.12
LINC01004-201ENST00000445184 TRGV4A0A0C4DH28 118 aa1.77□□□□□ -2.13
LINC01004-201ENST00000445184 LY6G6CO95867 125 aa1.77□□□□□ -2.13
LINC01004-201ENST00000445184 SPINK7P58062 85 aa1.77□□□□□ -2.13
LINC01004-201ENST00000445184 C1orf134Q5TEV5 83 aa1.77□□□□□ -2.13
LINC01004-201ENST00000445184 SPAG11AQ6PDA7 123 aa1.77□□□□□ -2.13
LINC01004-201ENST00000445184 RHPN1-AS1Q9BWJ2 59 aa1.77□□□□□ -2.13
LINC01004-201ENST00000445184 FAT1Q14517 4588 aa1.77□□□□□ -2.13
LINC01004-201ENST00000445184 DNAH2Q9P225 4427 aa1.77□□□□□ -2.13
LINC01004-201ENST00000445184 VPS13DQ5THJ4 4388 aa1.77□□□□□ -2.13
LINC01004-201ENST00000445184 PKHD1L1Q86WI1 4243 aa1.76□□□□□ -2.13
LINC01004-201ENST00000445184 A0A087WSZ3 146 aa1.76□□□□□ -2.13
LINC01004-201ENST00000445184 DEFB131BA0A096LNP1 70 aa1.76□□□□□ -2.13
LINC01004-201ENST00000445184 GVQW2A0A096LPI5 108 aaPredicted RBP1.76□□□□□ -2.13
LINC01004-201ENST00000445184 B4DSR2 109 aa1.76□□□□□ -2.13
LINC01004-201ENST00000445184 MSMBP08118 114 aa1.76□□□□□ -2.13
LINC01004-201ENST00000445184 TOMM7Q9P0U1 55 aa1.76□□□□□ -2.13
LINC01004-201ENST00000445184 A0A0G2JQZ4 141 aa1.75□□□□□ -2.13
LINC01004-201ENST00000445184 LINC00959A0A1B0GUT2 108 aa1.75□□□□□ -2.13
LINC01004-201ENST00000445184 DEFB112Q30KQ8 113 aa1.75□□□□□ -2.13
LINC01004-201ENST00000445184 SPACA4Q8TDM5 124 aa1.75□□□□□ -2.13
LINC01004-201ENST00000445184 LRP1BQ9NZR2 4599 aa1.75□□□□□ -2.13
LINC01004-201ENST00000445184 NEBP20929 6669 aa1.74□□□□□ -2.13
LINC01004-201ENST00000445184 GPR98Q8WXG9 6306 aa1.74□□□□□ -2.13
LINC01004-201ENST00000445184 DEFB1P60022 68 aa1.74□□□□□ -2.13
LINC01004-201ENST00000445184 PRB3Q04118 309 aaPredicted RBP1.74□□□□□ -2.13
LINC01004-201ENST00000445184 SPINK13Q1W4C9 94 aa1.74□□□□□ -2.13
LINC01004-201ENST00000445184 CSAG1Q6PB30 78 aa1.74□□□□□ -2.13
LINC01004-201ENST00000445184 TP53AIP1Q9HCN2 124 aa1.74□□□□□ -2.13
LINC01004-201ENST00000445184 DNAH5Q8TE73 4624 aa1.74□□□□□ -2.13
LINC01004-201ENST00000445184 G3V318 75 aa1.73□□□□□ -2.13
LINC01004-201ENST00000445184 K7EQZ3 153 aa1.73□□□□□ -2.13
LINC01004-201ENST00000445184 UQCR11O14957 56 aa1.73□□□□□ -2.13
LINC01004-201ENST00000445184 MIR22HGQ0VDD5 57 aa1.73□□□□□ -2.13
LINC01004-201ENST00000445184 C1orf137Q5JT78 98 aa1.73□□□□□ -2.13
LINC01004-201ENST00000445184 C5orf56Q8N8D9 126 aa1.73□□□□□ -2.13
LINC01004-201ENST00000445184 DNAH17Q9UFH2 4485 aa1.73□□□□□ -2.13
LINC01004-201ENST00000445184 VPS13BQ7Z7G8 4022 aa1.72□□□□□ -2.13
LINC01004-201ENST00000445184 IGKV3-7A0A075B6H7 116 aa1.72□□□□□ -2.13
LINC01004-201ENST00000445184 PKD1P98161 4303 aa1.71□□□□□ -2.14
LINC01004-201ENST00000445184 FCGBPQ9Y6R7 5405 aaPredicted RBP1.71□□□□□ -2.14
LINC01004-201ENST00000445184 SYNE2Q8WXH0 6885 aaKnown RBP1.7□□□□□ -2.14
LINC01004-201ENST00000445184 ACYP2P14621 99 aa1.7□□□□□ -2.14
LINC01004-201ENST00000445184 DMAC1Q96GE9 116 aa1.7□□□□□ -2.14
LINC01004-201ENST00000445184 SORL1Q92673 2214 aa1.7□□□□□ -2.14
LINC01004-201ENST00000445184 SSPOA2VEC9 5147 aa1.69□□□□□ -2.14
LINC01004-201ENST00000445184 TRGV1A0A0A0MS02 117 aa1.69□□□□□ -2.14
LINC01004-201ENST00000445184 A0A1B0GU69 56 aa1.69□□□□□ -2.14
LINC01004-201ENST00000445184 LYNX1G3V0Z9 82 aa1.69□□□□□ -2.14
LINC01004-201ENST00000445184 HTN1P15515 57 aa1.69□□□□□ -2.14
LINC01004-201ENST00000445184 DEFB131AP59861 70 aa1.69□□□□□ -2.14
LINC01004-201ENST00000445184 KRTAP13-4Q3LI77 160 aa1.69□□□□□ -2.14
LINC01004-201ENST00000445184 KRTAP13-1Q8IUC0 172 aa1.69□□□□□ -2.14
LINC01004-201ENST00000445184 PCOTHQ58A44 107 aa1.68□□□□□ -2.14
LINC01004-201ENST00000445184 KRTAP26-1Q6PEX3 210 aa1.68□□□□□ -2.14
LINC01004-201ENST00000445184 WFDC10BQ8IUB3 73 aa1.68□□□□□ -2.14
LINC01004-201ENST00000445184 WFDC13Q8IUB5 93 aa1.68□□□□□ -2.14
LINC01004-201ENST00000445184 LRP1Q07954 4544 aaKnown RBP1.67□□□□□ -2.14
LINC01004-201ENST00000445184 IGKV3OR2-268A0A0C4DH90 116 aa1.67□□□□□ -2.14
LINC01004-201ENST00000445184 H3BUX3 64 aa1.67□□□□□ -2.14
LINC01004-201ENST00000445184 ANGP03950 147 aaKnown RBP1.67□□□□□ -2.14
LINC01004-201ENST00000445184 SPRR1AP35321 89 aa1.67□□□□□ -2.14
LINC01004-201ENST00000445184 LELP1Q5T871 98 aa1.67□□□□□ -2.14
LINC01004-201ENST00000445184 UNQ6190/PRO20217Q6UXQ8 127 aa1.67□□□□□ -2.14
LINC01004-201ENST00000445184 Q6ZRN7 208 aaPredicted RBP1.67□□□□□ -2.14
LINC01004-201ENST00000445184 Q6ZRX8 168 aa1.67□□□□□ -2.14
LINC01004-201ENST00000445184 LINC00472Q9H8W2 130 aa1.67□□□□□ -2.14
LINC01004-201ENST00000445184 NUPR2A6NF83 97 aa1.66□□□□□ -2.14
LINC01004-201ENST00000445184 CLPSL2Q6UWE3 100 aa1.66□□□□□ -2.14
LINC01004-201ENST00000445184 C6orf48Q9UBA6 75 aa1.66□□□□□ -2.14
LINC01004-201ENST00000445184 FAT3Q8TDW7 4589 aa1.66□□□□□ -2.14
LINC01004-201ENST00000445184 MMP24-AS1A0A0U1RRL7 71 aa1.65□□□□□ -2.15
LINC01004-201ENST00000445184 LYNX1P0DP58 116 aa1.65□□□□□ -2.15
LINC01004-201ENST00000445184 Q5VSD8 79 aa1.65□□□□□ -2.15
LINC01004-201ENST00000445184 DEFB105AQ8NG35 78 aa1.65□□□□□ -2.15
LINC01004-201ENST00000445184 NOP10Q9NPE3 64 aaKnown RBP1.64□□□□□ -2.15
LINC01004-201ENST00000445184 PRO0255Q9UI72 69 aa1.64□□□□□ -2.15
LINC01004-201ENST00000445184 SPRR1BP22528 89 aa1.63□□□□□ -2.15
LINC01004-201ENST00000445184 KRTAP12-1P59990 96 aa1.62□□□□□ -2.15
LINC01004-201ENST00000445184 RPL37AP61513 92 aaKnown RBP1.62□□□□□ -2.15
LINC01004-201ENST00000445184 MRPL34Q9BQ48 92 aaKnown RBP1.62□□□□□ -2.15
LINC01004-201ENST00000445184 TNXBP22105 4242 aa1.61□□□□□ -2.15
LINC01004-201ENST00000445184 A0A087WTM6 91 aa1.61□□□□□ -2.15
LINC01004-201ENST00000445184 MACF1Q9UPN3 7388 aaKnown RBP1.6□□□□□ -2.15
LINC01004-201ENST00000445184 C4orf3Q8WVX3 66 aa1.6□□□□□ -2.15
LINC01004-201ENST00000445184 USH2AO75445 5202 aa1.59□□□□□ -2.16
LINC01004-201ENST00000445184 KRTAP12-3P60328 96 aa1.58□□□□□ -2.16
LINC01004-201ENST00000445184 KRTAP20-1Q3LI63 56 aa1.58□□□□□ -2.16
LINC01004-201ENST00000445184 Q96NJ1 140 aa1.58□□□□□ -2.16
LINC01004-201ENST00000445184 H3BNG1 76 aa1.57□□□□□ -2.16
LINC01004-201ENST00000445184 COX6B2Q6YFQ2 88 aa1.57□□□□□ -2.16
LINC01004-201ENST00000445184 NBDYA0A0U1RRE5 68 aa1.56□□□□□ -2.16
LINC01004-201ENST00000445184 H0YAA0 97 aa1.56□□□□□ -2.16
LINC01004-201ENST00000445184 DEFB130BP0DP73 79 aa1.56□□□□□ -2.16
LINC01004-201ENST00000445184 DEFB130AP0DP74 79 aa1.56□□□□□ -2.16
LINC01004-201ENST00000445184 KRTAP12-4P60329 112 aa1.56□□□□□ -2.16
LINC01004-201ENST00000445184 DEFB136Q30KP8 78 aa1.56□□□□□ -2.16
LINC01004-201ENST00000445184 Q6ZSA8 131 aa1.56□□□□□ -2.16
LINC01004-201ENST00000445184 SSBP3-AS1Q7Z2R9 100 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms