RNA–Protein interactions for RNA: ENST00000444415.7

TRAF4-205, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-205ENST00000444415 FAM236BA0A1B0GV22 79 aa9.91□□□□□ -0.82
TRAF4-205ENST00000444415 IMUPQ9GZP8 106 aa9.87□□□□□ -0.83
TRAF4-205ENST00000444415 MACF1Q9UPN3 7388 aaKnown RBP9.87□□□□□ -0.83
TRAF4-205ENST00000444415 MP68P56378 58 aa9.85□□□□□ -0.83
TRAF4-205ENST00000444415 SPRR2GQ9BYE4 73 aa9.85□□□□□ -0.83
TRAF4-205ENST00000444415 MT-ATP8P03928 68 aa9.84□□□□□ -0.83
TRAF4-205ENST00000444415 SCGB1A1P11684 91 aa9.82□□□□□ -0.84
TRAF4-205ENST00000444415 MT1BP07438 61 aa9.8□□□□□ -0.84
TRAF4-205ENST00000444415 KRTAP9-7A8MTY7 169 aa9.79□□□□□ -0.84
TRAF4-205ENST00000444415 A8MUN3 132 aa9.79□□□□□ -0.84
TRAF4-205ENST00000444415 KRTAP19-8Q3LI54 63 aa9.77□□□□□ -0.85
TRAF4-205ENST00000444415 H3BPC8 53 aa9.75□□□□□ -0.85
TRAF4-205ENST00000444415 NDUFC1O43677 76 aa9.74□□□□□ -0.85
TRAF4-205ENST00000444415 SYNE2Q8WXH0 6885 aaKnown RBP9.73□□□□□ -0.85
TRAF4-205ENST00000444415 H0YAA0 97 aa9.69□□□□□ -0.86
TRAF4-205ENST00000444415 Q5VV11 94 aa9.66□□□□□ -0.86
TRAF4-205ENST00000444415 SMIM20Q8N5G0 67 aa9.65□□□□□ -0.87
TRAF4-205ENST00000444415 DMAC1Q96GE9 116 aa9.64□□□□□ -0.87
TRAF4-205ENST00000444415 CRIPTQ9P021 101 aa9.62□□□□□ -0.87
TRAF4-205ENST00000444415 TRAV7A0A075B6U4 112 aa9.6□□□□□ -0.87
TRAF4-205ENST00000444415 ADM2Q7Z4H4 148 aa9.58□□□□□ -0.88
TRAF4-205ENST00000444415 A6NN06 94 aa9.51□□□□□ -0.89
TRAF4-205ENST00000444415 KRTAP10-5P60370 271 aa9.49□□□□□ -0.89
TRAF4-205ENST00000444415 P0C880 135 aa9.46□□□□□ -0.9
TRAF4-205ENST00000444415 KRTAP3-2Q9BYR7 98 aa9.42□□□□□ -0.9
TRAF4-205ENST00000444415 SERP2Q8N6R1 65 aa9.4□□□□□ -0.9
TRAF4-205ENST00000444415 SNURFQ9Y675 71 aa9.4□□□□□ -0.91
TRAF4-205ENST00000444415 KRTAP6-3Q3LI67 103 aa9.35□□□□□ -0.91
TRAF4-205ENST00000444415 ACYP2P14621 99 aa9.34□□□□□ -0.91
TRAF4-205ENST00000444415 C20orf197Q8N268 126 aa9.33□□□□□ -0.92
TRAF4-205ENST00000444415 R4GN34 69 aa9.28□□□□□ -0.92
TRAF4-205ENST00000444415 MUC12Q9UKN1 5478 aa9.26□□□□□ -0.93
TRAF4-205ENST00000444415 M0QZ58 72 aa9.24□□□□□ -0.93
TRAF4-205ENST00000444415 MT1XP80297 61 aa9.22□□□□□ -0.93
TRAF4-205ENST00000444415 SPANXA2-OT1Q8N9U9 137 aa9.22□□□□□ -0.93
TRAF4-205ENST00000444415 COX7CP15954 63 aa9.21□□□□□ -0.93
TRAF4-205ENST00000444415 KMT2DO14686 5537 aa9.21□□□□□ -0.94
TRAF4-205ENST00000444415 PCP4P48539 62 aa9.15□□□□□ -0.95
TRAF4-205ENST00000444415 CHKB-CPT1BH3BT56 60 aa9.14□□□□□ -0.95
TRAF4-205ENST00000444415 SPTSSBQ8NFR3 76 aa9.14□□□□□ -0.95
TRAF4-205ENST00000444415 PLAC4Q8WY50 150 aa9.12□□□□□ -0.95
TRAF4-205ENST00000444415 NEBP20929 6669 aa9.11□□□□□ -0.95
TRAF4-205ENST00000444415 LINC01554Q52M75 96 aa9.08□□□□□ -0.96
TRAF4-205ENST00000444415 KRTAP5-9P26371 169 aa9.05□□□□□ -0.96
TRAF4-205ENST00000444415 ANAPC13Q9BS18 74 aa9.05□□□□□ -0.96
TRAF4-205ENST00000444415 PRO2289Q9P1D8 64 aa9.05□□□□□ -0.96
TRAF4-205ENST00000444415 CYSTM1Q9H1C7 97 aa9.03□□□□□ -0.96
TRAF4-205ENST00000444415 MDN1Q9NU22 5596 aa9.02□□□□□ -0.96
TRAF4-205ENST00000444415 H7BZZ5 65 aa9□□□□□ -0.97
TRAF4-205ENST00000444415 COA5Q86WW8 74 aa8.97□□□□□ -0.97
TRAF4-205ENST00000444415 KRTAP13-4Q3LI77 160 aa8.94□□□□□ -0.98
TRAF4-205ENST00000444415 KRTAP12-2P59991 146 aa8.91□□□□□ -0.98
TRAF4-205ENST00000444415 CCDC179H3BU77 68 aa8.85□□□□□ -0.99
TRAF4-205ENST00000444415 KRTAP10-7P60409 375 aaPredicted RBP8.8□□□□□ -1
TRAF4-205ENST00000444415 KRTAP4-8A0A0G2JLE6 195 aa8.78□□□□□ -1
TRAF4-205ENST00000444415 KRTAP4-8Q9BYQ9 185 aa8.78□□□□□ -1
TRAF4-205ENST00000444415 KRTAP8-1Q8IUC2 63 aa8.75□□□□□ -1.01
TRAF4-205ENST00000444415 SPRR2FQ96RM1 72 aa8.75□□□□□ -1.01
TRAF4-205ENST00000444415 KRTAP10-12P60413 245 aa8.73□□□□□ -1.01
TRAF4-205ENST00000444415 ATP5EP56381 51 aaPredicted RBP8.67□□□□□ -1.02
TRAF4-205ENST00000444415 SEC61GP60059 68 aa8.65□□□□□ -1.02
TRAF4-205ENST00000444415 SERP1Q9Y6X1 66 aa8.64□□□□□ -1.03
TRAF4-205ENST00000444415 SPATA8Q6RVD6 105 aa8.61□□□□□ -1.03
TRAF4-205ENST00000444415 SPRR2EP22531 72 aa8.57□□□□□ -1.04
TRAF4-205ENST00000444415 SPRR2BP35325 72 aa8.57□□□□□ -1.04
TRAF4-205ENST00000444415 SPRR2AP35326 72 aa8.57□□□□□ -1.04
TRAF4-205ENST00000444415 A0A0D9SG42 100 aa8.56□□□□□ -1.04
TRAF4-205ENST00000444415 A0A1B0GU33 70 aa8.56□□□□□ -1.04
TRAF4-205ENST00000444415 TMEM258P61165 79 aa8.56□□□□□ -1.04
TRAF4-205ENST00000444415 KRTAP20-1Q3LI63 56 aa8.56□□□□□ -1.04
TRAF4-205ENST00000444415 LCE1AQ5T7P2 110 aa8.55□□□□□ -1.04
TRAF4-205ENST00000444415 CAMK2N1Q7Z7J9 78 aa8.51□□□□□ -1.05
TRAF4-205ENST00000444415 A0A1B0GU69 56 aa8.47□□□□□ -1.05
TRAF4-205ENST00000444415 KRTAP12-1P59990 96 aa8.45□□□□□ -1.06
TRAF4-205ENST00000444415 SPINT4Q6UDR6 99 aa8.39□□□□□ -1.07
TRAF4-205ENST00000444415 KRTAP2-3P0C7H8 128 aa8.38□□□□□ -1.07
TRAF4-205ENST00000444415 KRTAP2-4Q9BYR9 128 aa8.38□□□□□ -1.07
TRAF4-205ENST00000444415 RPS28P62857 69 aaKnown RBP8.37□□□□□ -1.07
TRAF4-205ENST00000444415 A8MU10 97 aa8.34□□□□□ -1.07
TRAF4-205ENST00000444415 PRR15LQ9BU68 103 aa8.32□□□□□ -1.08
TRAF4-205ENST00000444415 LINC01558Q9Y6Z2 57 aa8.32□□□□□ -1.08
TRAF4-205ENST00000444415 SPRR2DP22532 72 aa8.28□□□□□ -1.08
TRAF4-205ENST00000444415 SMIM26A0A096LP01 95 aa8.26□□□□□ -1.09
TRAF4-205ENST00000444415 KRTAP19-7Q3SYF9 63 aa8.26□□□□□ -1.09
TRAF4-205ENST00000444415 MT1EP04732 61 aa8.15□□□□□ -1.1
TRAF4-205ENST00000444415 KRTAP2-2Q9BYT5 123 aa8.13□□□□□ -1.11
TRAF4-205ENST00000444415 KRTAP2-1Q9BYU5 128 aa8.13□□□□□ -1.11
TRAF4-205ENST00000444415 C10orf95Q9H7T3 257 aa8.09□□□□□ -1.11
TRAF4-205ENST00000444415 UQCR11O14957 56 aa8.06□□□□□ -1.12
TRAF4-205ENST00000444415 LCE3BQ5TA77 95 aa8.06□□□□□ -1.12
TRAF4-205ENST00000444415 LCE5AQ5TCM9 118 aa8.05□□□□□ -1.12
TRAF4-205ENST00000444415 KRTAP19-5Q3LI72 72 aa8.04□□□□□ -1.12
TRAF4-205ENST00000444415 V9GYY9 64 aa8.04□□□□□ -1.12
TRAF4-205ENST00000444415 KRTAP19-3Q7Z4W3 81 aa8.01□□□□□ -1.13
TRAF4-205ENST00000444415 Q1T7F1 81 aa8□□□□□ -1.13
TRAF4-205ENST00000444415 DSTQ03001 7570 aaKnown RBP7.98□□□□□ -1.13
TRAF4-205ENST00000444415 LCE3AQ5TA76 89 aa7.94□□□□□ -1.14
TRAF4-205ENST00000444415 PSPHP1O15172 72 aa7.92□□□□□ -1.14
TRAF4-205ENST00000444415 TNP1P09430 55 aa7.91□□□□□ -1.14
TRAF4-205ENST00000444415 MIR22HGQ0VDD5 57 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms