RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 IGKV2D-30A0A075B6S6 120 aa1.52□□□□□ -2.17
LINC00393-201ENST00000443621 HRES1P13985 223 aa1.52□□□□□ -2.17
LINC00393-201ENST00000443621 SPTSSBQ8NFR3 76 aa1.52□□□□□ -2.17
LINC00393-201ENST00000443621 PRAC1Q96KF2 57 aa1.52□□□□□ -2.17
LINC00393-201ENST00000443621 KRTAP4-2Q9BYR5 136 aa1.52□□□□□ -2.17
LINC00393-201ENST00000443621 LRP1Q07954 4544 aaKnown RBP1.51□□□□□ -2.17
LINC00393-201ENST00000443621 LCE2CQ5TA81 110 aa1.51□□□□□ -2.17
LINC00393-201ENST00000443621 K7ERS5 55 aa1.5□□□□□ -2.17
LINC00393-201ENST00000443621 SPINK7P58062 85 aa1.5□□□□□ -2.17
LINC00393-201ENST00000443621 PCOTHQ58A44 107 aa1.5□□□□□ -2.17
LINC00393-201ENST00000443621 COX6B2Q6YFQ2 88 aa1.5□□□□□ -2.17
LINC00393-201ENST00000443621 CAMK2N1Q7Z7J9 78 aa1.5□□□□□ -2.17
LINC00393-201ENST00000443621 COA5Q86WW8 74 aa1.5□□□□□ -2.17
LINC00393-201ENST00000443621 LINC01558Q9Y6Z2 57 aa1.5□□□□□ -2.17
LINC00393-201ENST00000443621 C9orf92A6NGG3 77 aa1.49□□□□□ -2.17
LINC00393-201ENST00000443621 MYCBP2O75592 4640 aa1.49□□□□□ -2.17
LINC00393-201ENST00000443621 DMBT1Q9UGM3 2413 aaPredicted RBP1.48□□□□□ -2.17
LINC00393-201ENST00000443621 KIAA1109Q2LD37 5005 aa1.48□□□□□ -2.17
LINC00393-201ENST00000443621 RETNLBQ9BQ08 111 aa1.48□□□□□ -2.17
LINC00393-201ENST00000443621 PRR15LQ9BU68 103 aa1.48□□□□□ -2.17
LINC00393-201ENST00000443621 CHKB-CPT1BH3BT56 60 aa1.47□□□□□ -2.17
LINC00393-201ENST00000443621 LUZP6Q538Z0 58 aa1.47□□□□□ -2.17
LINC00393-201ENST00000443621 LCE2AQ5TA79 106 aaPredicted RBP1.47□□□□□ -2.17
LINC00393-201ENST00000443621 KRTAP4-9Q9BYQ8 210 aa1.47□□□□□ -2.17
LINC00393-201ENST00000443621 EPPK1P58107 5090 aaKnown RBP1.47□□□□□ -2.17
LINC00393-201ENST00000443621 LCE1DQ5T752 114 aa1.46□□□□□ -2.18
LINC00393-201ENST00000443621 KRTAP4-12Q9BQ66 201 aa1.46□□□□□ -2.18
LINC00393-201ENST00000443621 A6NN06 94 aa1.45□□□□□ -2.18
LINC00393-201ENST00000443621 H0YAA0 97 aa1.45□□□□□ -2.18
LINC00393-201ENST00000443621 H1FX-AS1Q4G0G2 97 aa1.45□□□□□ -2.18
LINC00393-201ENST00000443621 KRTAP4-5Q9BYR2 181 aa1.45□□□□□ -2.18
LINC00393-201ENST00000443621 KRTAP3-1Q9BYR8 98 aa1.45□□□□□ -2.18
LINC00393-201ENST00000443621 HERC2O95714 4834 aa1.45□□□□□ -2.18
LINC00393-201ENST00000443621 A0A1B0GU69 56 aa1.44□□□□□ -2.18
LINC00393-201ENST00000443621 A6NED7 52 aa1.44□□□□□ -2.18
LINC00393-201ENST00000443621 UQCR11O14957 56 aa1.44□□□□□ -2.18
LINC00393-201ENST00000443621 Q5VV11 94 aa1.44□□□□□ -2.18
LINC00393-201ENST00000443621 BIRC6Q9NR09 4857 aa1.43□□□□□ -2.18
LINC00393-201ENST00000443621 CDC42SE1Q9NRR8 79 aa1.43□□□□□ -2.18
LINC00393-201ENST00000443621 LORP23490 312 aaPredicted RBP1.42□□□□□ -2.18
LINC00393-201ENST00000443621 CSAG1Q6PB30 78 aa1.42□□□□□ -2.18
LINC00393-201ENST00000443621 SPATA8Q6RVD6 105 aa1.42□□□□□ -2.18
LINC00393-201ENST00000443621 S4R3F8 94 aa1.42□□□□□ -2.18
LINC00393-201ENST00000443621 LRP2P98164 4655 aa1.42□□□□□ -2.18
LINC00393-201ENST00000443621 MUC17Q685J3 4493 aa1.41□□□□□ -2.18
LINC00393-201ENST00000443621 ADM2Q7Z4H4 148 aa1.41□□□□□ -2.18
LINC00393-201ENST00000443621 ROMO1P60602 79 aa1.4□□□□□ -2.19
LINC00393-201ENST00000443621 A0A1B0GU33 70 aa1.39□□□□□ -2.19
LINC00393-201ENST00000443621 M0QZ58 72 aa1.39□□□□□ -2.19
LINC00393-201ENST00000443621 KRTAP19-2Q3LHN2 52 aa1.39□□□□□ -2.19
LINC00393-201ENST00000443621 CRIPTQ9P021 101 aa1.39□□□□□ -2.19
LINC00393-201ENST00000443621 ABCA13Q86UQ4 5058 aa1.39□□□□□ -2.19
LINC00393-201ENST00000443621 LPAP08519 4548 aa1.38□□□□□ -2.19
LINC00393-201ENST00000443621 MIR22HGQ0VDD5 57 aa1.38□□□□□ -2.19
LINC00393-201ENST00000443621 KRTAP10-6P60371 365 aaPredicted RBP1.37□□□□□ -2.19
LINC00393-201ENST00000443621 KRTAP4-11Q9BYQ6 195 aa1.36□□□□□ -2.19
LINC00393-201ENST00000443621 KRTAP19-1Q8IUB9 90 aa1.35□□□□□ -2.19
LINC00393-201ENST00000443621 KRTAP4-1Q9BYQ7 146 aa1.35□□□□□ -2.19
LINC00393-201ENST00000443621 FLGP20930 4061 aaPredicted RBP1.35□□□□□ -2.19
LINC00393-201ENST00000443621 NDUFAF8A1L188 74 aa1.34□□□□□ -2.19
LINC00393-201ENST00000443621 HMCN2Q8NDA2 5059 aa1.34□□□□□ -2.2
LINC00393-201ENST00000443621 HERC1Q15751 4861 aa1.33□□□□□ -2.2
LINC00393-201ENST00000443621 P0C880 135 aa1.32□□□□□ -2.2
LINC00393-201ENST00000443621 R4GN34 69 aa1.32□□□□□ -2.2
LINC00393-201ENST00000443621 PCLOQ9Y6V0 5065 aa1.32□□□□□ -2.2
LINC00393-201ENST00000443621 SPRR2GQ9BYE4 73 aa1.3□□□□□ -2.2
LINC00393-201ENST00000443621 A8MU10 97 aa1.29□□□□□ -2.2
LINC00393-201ENST00000443621 KRTAP12-1P59990 96 aa1.29□□□□□ -2.2
LINC00393-201ENST00000443621 MT1HP80294 61 aa1.29□□□□□ -2.2
LINC00393-201ENST00000443621 KRTAP25-1Q3LHN0 102 aa1.28□□□□□ -2.2
LINC00393-201ENST00000443621 KRTAP13-4Q3LI77 160 aa1.28□□□□□ -2.2
LINC00393-201ENST00000443621 MUC2Q02817 5179 aa1.28□□□□□ -2.2
LINC00393-201ENST00000443621 SPINT4Q6UDR6 99 aa1.27□□□□□ -2.21
LINC00393-201ENST00000443621 M0R2T5 61 aa1.26□□□□□ -2.21
LINC00393-201ENST00000443621 KRTAP19-8Q3LI54 63 aa1.26□□□□□ -2.21
LINC00393-201ENST00000443621 KRTAP12-2P59991 146 aa1.25□□□□□ -2.21
LINC00393-201ENST00000443621 KRTAP19-4Q3LI73 84 aa1.25□□□□□ -2.21
LINC00393-201ENST00000443621 PP632Q6XCG6 107 aa1.25□□□□□ -2.21
LINC00393-201ENST00000443621 PRO2289Q9P1D8 64 aa1.25□□□□□ -2.21
LINC00393-201ENST00000443621 A0A0D9SG42 100 aa1.24□□□□□ -2.21
LINC00393-201ENST00000443621 MT2AP02795 61 aa1.24□□□□□ -2.21
LINC00393-201ENST00000443621 KRTAP10-10P60014 251 aa1.24□□□□□ -2.21
LINC00393-201ENST00000443621 PLAC4Q8WY50 150 aa1.24□□□□□ -2.21
LINC00393-201ENST00000443621 MT1FP04733 61 aa1.22□□□□□ -2.21
LINC00393-201ENST00000443621 TNP1P09430 55 aa1.22□□□□□ -2.21
LINC00393-201ENST00000443621 KRTAP9-3Q9BYQ3 159 aa1.22□□□□□ -2.21
LINC00393-201ENST00000443621 FAT4Q6V0I7 4981 aa1.22□□□□□ -2.21
LINC00393-201ENST00000443621 KRTAP15-1Q3LI76 137 aa1.21□□□□□ -2.22
LINC00393-201ENST00000443621 RNF213Q63HN8 5207 aa1.2□□□□□ -2.22
LINC00393-201ENST00000443621 UBR4Q5T4S7 5183 aa1.2□□□□□ -2.22
LINC00393-201ENST00000443621 C10orf95Q9H7T3 257 aa1.2□□□□□ -2.22
LINC00393-201ENST00000443621 MT1BP07438 61 aa1.19□□□□□ -2.22
LINC00393-201ENST00000443621 INE1O15225 51 aa1.16□□□□□ -2.22
LINC00393-201ENST00000443621 KRTAP10-5P60370 271 aa1.16□□□□□ -2.22
LINC00393-201ENST00000443621 MT1XP80297 61 aa1.15□□□□□ -2.23
LINC00393-201ENST00000443621 KRTAP8-1Q8IUC2 63 aa1.15□□□□□ -2.23
LINC00393-201ENST00000443621 KRTAP10-12P60413 245 aa1.14□□□□□ -2.23
LINC00393-201ENST00000443621 KRTAP19-6Q3LI70 58 aa1.14□□□□□ -2.23
LINC00393-201ENST00000443621 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.11□□□□□ -2.23
LINC00393-201ENST00000443621 LCE5AQ5TCM9 118 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms