RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 TNXBP22105 4242 aa6.98□□□□□ -1.29
SLC48A1-201ENST00000442218 LINC01554Q52M75 96 aa6.98□□□□□ -1.29
SLC48A1-201ENST00000442218 A0A1B0GU33 70 aa6.97□□□□□ -1.29
SLC48A1-201ENST00000442218 A8MUU9 505 aa6.95□□□□□ -1.3
SLC48A1-201ENST00000442218 C20orf166-AS1Q96NR2 134 aa6.94□□□□□ -1.3
SLC48A1-201ENST00000442218 A0A0D9SG42 100 aa6.92□□□□□ -1.3
SLC48A1-201ENST00000442218 H1FX-AS1Q4G0G2 97 aa6.9□□□□□ -1.31
SLC48A1-201ENST00000442218 LRP2P98164 4655 aa6.88□□□□□ -1.31
SLC48A1-201ENST00000442218 RPS29P62273 56 aaKnown RBP6.87□□□□□ -1.31
SLC48A1-201ENST00000442218 ABCA13Q86UQ4 5058 aa6.86□□□□□ -1.31
SLC48A1-201ENST00000442218 COX6B2Q6YFQ2 88 aa6.85□□□□□ -1.31
SLC48A1-201ENST00000442218 KRTAP10-8P60410 259 aa6.84□□□□□ -1.31
SLC48A1-201ENST00000442218 KRTAP13-4Q3LI77 160 aa6.78□□□□□ -1.32
SLC48A1-201ENST00000442218 KRTAP4-5Q9BYR2 181 aa6.77□□□□□ -1.33
SLC48A1-201ENST00000442218 MT1HL1P0DM35 61 aa6.74□□□□□ -1.33
SLC48A1-201ENST00000442218 KRTAP25-1Q3LHN0 102 aa6.73□□□□□ -1.33
SLC48A1-201ENST00000442218 KRTAP3-3Q9BYR6 98 aa6.73□□□□□ -1.33
SLC48A1-201ENST00000442218 P0C880 135 aa6.71□□□□□ -1.33
SLC48A1-201ENST00000442218 KRTAP10-6P60371 365 aaPredicted RBP6.7□□□□□ -1.34
SLC48A1-201ENST00000442218 K7ERS5 55 aa6.69□□□□□ -1.34
SLC48A1-201ENST00000442218 XP32Q5T750 250 aa6.69□□□□□ -1.34
SLC48A1-201ENST00000442218 C10orf95Q9H7T3 257 aa6.68□□□□□ -1.34
SLC48A1-201ENST00000442218 MUC2Q02817 5179 aa6.67□□□□□ -1.34
SLC48A1-201ENST00000442218 S4R3F8 94 aa6.66□□□□□ -1.34
SLC48A1-201ENST00000442218 RPL37P61927 97 aaKnown RBP6.64□□□□□ -1.35
SLC48A1-201ENST00000442218 H3BS24 57 aa6.63□□□□□ -1.35
SLC48A1-201ENST00000442218 KRTAP3-2Q9BYR7 98 aa6.63□□□□□ -1.35
SLC48A1-201ENST00000442218 BIRC6Q9NR09 4857 aa6.63□□□□□ -1.35
SLC48A1-201ENST00000442218 HERC2O95714 4834 aa6.62□□□□□ -1.35
SLC48A1-201ENST00000442218 SPINT4Q6UDR6 99 aa6.6□□□□□ -1.35
SLC48A1-201ENST00000442218 ROMO1P60602 79 aa6.58□□□□□ -1.36
SLC48A1-201ENST00000442218 TPRXLQ17RH7 258 aa6.55□□□□□ -1.36
SLC48A1-201ENST00000442218 KRTAP12-2P59991 146 aa6.55□□□□□ -1.36
SLC48A1-201ENST00000442218 J3QL48 77 aa6.45□□□□□ -1.38
SLC48A1-201ENST00000442218 KRTAP12-1P59990 96 aa6.4□□□□□ -1.38
SLC48A1-201ENST00000442218 PCLOQ9Y6V0 5065 aa6.4□□□□□ -1.39
SLC48A1-201ENST00000442218 HERC1Q15751 4861 aa6.39□□□□□ -1.39
SLC48A1-201ENST00000442218 M0QZ58 72 aa6.33□□□□□ -1.4
SLC48A1-201ENST00000442218 FAT4Q6V0I7 4981 aa6.31□□□□□ -1.4
SLC48A1-201ENST00000442218 LORP23490 312 aaPredicted RBP6.31□□□□□ -1.4
SLC48A1-201ENST00000442218 KRTAP4-1Q9BYQ7 146 aa6.3□□□□□ -1.4
SLC48A1-201ENST00000442218 MUC17Q685J3 4493 aa6.28□□□□□ -1.4
SLC48A1-201ENST00000442218 R4GN34 69 aa6.27□□□□□ -1.41
SLC48A1-201ENST00000442218 NDUFAF8A1L188 74 aa6.25□□□□□ -1.41
SLC48A1-201ENST00000442218 RNF213Q63HN8 5207 aa6.24□□□□□ -1.41
SLC48A1-201ENST00000442218 HMCN2Q8NDA2 5059 aa6.21□□□□□ -1.42
SLC48A1-201ENST00000442218 SEC61BP60468 96 aaKnown RBP6.18□□□□□ -1.42
SLC48A1-201ENST00000442218 KRTAP15-1Q3LI76 137 aa6.14□□□□□ -1.43
SLC48A1-201ENST00000442218 UBR4Q5T4S7 5183 aa6.07□□□□□ -1.44
SLC48A1-201ENST00000442218 CAMK2N1Q7Z7J9 78 aa6.01□□□□□ -1.45
SLC48A1-201ENST00000442218 KRTAP19-2Q3LHN2 52 aa6□□□□□ -1.45
SLC48A1-201ENST00000442218 FLGP20930 4061 aaPredicted RBP5.95□□□□□ -1.46
SLC48A1-201ENST00000442218 PLAC4Q8WY50 150 aa5.91□□□□□ -1.46
SLC48A1-201ENST00000442218 LCE2CQ5TA81 110 aa5.81□□□□□ -1.48
SLC48A1-201ENST00000442218 M0R2T5 61 aa5.71□□□□□ -1.5
SLC48A1-201ENST00000442218 MT1HP80294 61 aa5.67□□□□□ -1.5
SLC48A1-201ENST00000442218 TNP1P09430 55 aa5.64□□□□□ -1.51
SLC48A1-201ENST00000442218 LUZP6Q538Z0 58 aa5.64□□□□□ -1.51
SLC48A1-201ENST00000442218 USH2AO75445 5202 aa5.61□□□□□ -1.51
SLC48A1-201ENST00000442218 A0A0A0MQY5 61 aa5.61□□□□□ -1.51
SLC48A1-201ENST00000442218 PP632Q6XCG6 107 aa5.59□□□□□ -1.51
SLC48A1-201ENST00000442218 LCE2DQ5TA82 110 aaPredicted RBP5.56□□□□□ -1.52
SLC48A1-201ENST00000442218 KRTAP19-1Q8IUB9 90 aa5.53□□□□□ -1.52
SLC48A1-201ENST00000442218 KRTAP10-10P60014 251 aa5.52□□□□□ -1.53
SLC48A1-201ENST00000442218 MT1FP04733 61 aa5.51□□□□□ -1.53
SLC48A1-201ENST00000442218 KRTAP9-8Q9BYQ0 159 aa5.49□□□□□ -1.53
SLC48A1-201ENST00000442218 MT2AP02795 61 aa5.48□□□□□ -1.53
SLC48A1-201ENST00000442218 LCE3AQ5TA76 89 aa5.46□□□□□ -1.54
SLC48A1-201ENST00000442218 KMT2DO14686 5537 aa5.44□□□□□ -1.54
SLC48A1-201ENST00000442218 SPRR2GQ9BYE4 73 aa5.4□□□□□ -1.55
SLC48A1-201ENST00000442218 FSIP2Q5CZC0 6907 aa5.34□□□□□ -1.55
SLC48A1-201ENST00000442218 LCE2AQ5TA79 106 aaPredicted RBP5.31□□□□□ -1.56
SLC48A1-201ENST00000442218 KRTAP9-3Q9BYQ3 159 aa5.27□□□□□ -1.57
SLC48A1-201ENST00000442218 SPRR5A0A1B0GTR4 108 aa5.25□□□□□ -1.57
SLC48A1-201ENST00000442218 MT1BP07438 61 aa5.25□□□□□ -1.57
SLC48A1-201ENST00000442218 KRTAP19-8Q3LI54 63 aa5.21□□□□□ -1.57
SLC48A1-201ENST00000442218 KRTAP23-1A1A580 65 aa5.21□□□□□ -1.58
SLC48A1-201ENST00000442218 KRTAP10-5P60370 271 aa5.21□□□□□ -1.58
SLC48A1-201ENST00000442218 MT1XP80297 61 aa5.2□□□□□ -1.58
SLC48A1-201ENST00000442218 KRTAP10-7P60409 375 aaPredicted RBP5.18□□□□□ -1.58
SLC48A1-201ENST00000442218 LCE2BO14633 110 aa5.14□□□□□ -1.59
SLC48A1-201ENST00000442218 KRTAP10-12P60413 245 aa5.13□□□□□ -1.59
SLC48A1-201ENST00000442218 KRTAP12-3P60328 96 aa5.12□□□□□ -1.59
SLC48A1-201ENST00000442218 KRTAP8-1Q8IUC2 63 aa5.09□□□□□ -1.6
SLC48A1-201ENST00000442218 KRTAP4-8A0A0G2JLE6 195 aa5□□□□□ -1.61
SLC48A1-201ENST00000442218 KRTAP4-8Q9BYQ9 185 aa5□□□□□ -1.61
SLC48A1-201ENST00000442218 KRTAP19-5Q3LI72 72 aa4.95□□□□□ -1.62
SLC48A1-201ENST00000442218 SSPOA2VEC9 5147 aa4.9□□□□□ -1.63
SLC48A1-201ENST00000442218 PRO2289Q9P1D8 64 aa4.89□□□□□ -1.63
SLC48A1-201ENST00000442218 KRTAP4-7Q9BYR0 210 aa4.86□□□□□ -1.63
SLC48A1-201ENST00000442218 MUC12Q9UKN1 5478 aa4.78□□□□□ -1.64
SLC48A1-201ENST00000442218 DSTQ03001 7570 aaKnown RBP4.77□□□□□ -1.65
SLC48A1-201ENST00000442218 LCE3CQ5T5A8 94 aa4.77□□□□□ -1.65
SLC48A1-201ENST00000442218 KRTAP9-6A8MVA2 160 aa4.76□□□□□ -1.65
SLC48A1-201ENST00000442218 FCGBPQ9Y6R7 5405 aaPredicted RBP4.75□□□□□ -1.65
SLC48A1-201ENST00000442218 KRTAP19-6Q3LI70 58 aa4.7□□□□□ -1.66
SLC48A1-201ENST00000442218 INE1O15225 51 aa4.64□□□□□ -1.67
SLC48A1-201ENST00000442218 KRTAP19-7Q3SYF9 63 aa4.64□□□□□ -1.67
SLC48A1-201ENST00000442218 KRTAP9-2Q9BYQ4 174 aa4.54□□□□□ -1.68
SLC48A1-201ENST00000442218 CRCT1Q9UGL9 99 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms