RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 PRO0255Q9UI72 69 aa2.62□□□□□ -1.99
HMGB3P9-201ENST00000441799 COL7A1Q02388 2944 aa2.62□□□□□ -1.99
HMGB3P9-201ENST00000441799 ALMS1Q8TCU4 4167 aa2.61□□□□□ -1.99
HMGB3P9-201ENST00000441799 TPRXLQ17RH7 258 aa2.61□□□□□ -1.99
HMGB3P9-201ENST00000441799 CLPSL2Q6UWE3 100 aa2.61□□□□□ -1.99
HMGB3P9-201ENST00000441799 SSBP3-AS1Q7Z2R9 100 aa2.61□□□□□ -1.99
HMGB3P9-201ENST00000441799 SPACA4Q8TDM5 124 aa2.61□□□□□ -1.99
HMGB3P9-201ENST00000441799 KIAA1109Q2LD37 5005 aa2.61□□□□□ -1.99
HMGB3P9-201ENST00000441799 DNAH7Q8WXX0 4024 aa2.61□□□□□ -1.99
HMGB3P9-201ENST00000441799 A0A096LPF7 62 aa2.6□□□□□ -1.99
HMGB3P9-201ENST00000441799 HTN3P15516 51 aa2.6□□□□□ -1.99
HMGB3P9-201ENST00000441799 KRTAP5-5Q701N2 237 aaPredicted RBP2.6□□□□□ -1.99
HMGB3P9-201ENST00000441799 PLECQ15149 4684 aaKnown RBP2.6□□□□□ -1.99
HMGB3P9-201ENST00000441799 CSMD3Q7Z407 3707 aa2.58□□□□□ -2
HMGB3P9-201ENST00000441799 IGKV2-24A0A0C4DH68 120 aa2.58□□□□□ -2
HMGB3P9-201ENST00000441799 SPART-AS1P0CW21 52 aa2.58□□□□□ -2
HMGB3P9-201ENST00000441799 TENM2Q9NT68 2774 aa2.58□□□□□ -2
HMGB3P9-201ENST00000441799 HECTD4Q9Y4D8 3996 aa2.58□□□□□ -2
HMGB3P9-201ENST00000441799 FRAS1Q86XX4 4008 aa2.58□□□□□ -2
HMGB3P9-201ENST00000441799 DEFB135Q30KP9 77 aa2.57□□□□□ -2
HMGB3P9-201ENST00000441799 LELP1Q5T871 98 aa2.57□□□□□ -2
HMGB3P9-201ENST00000441799 INE1O15225 51 aa2.56□□□□□ -2
HMGB3P9-201ENST00000441799 DNAH10Q8IVF4 4471 aa2.55□□□□□ -2
HMGB3P9-201ENST00000441799 PCOTHQ58A44 107 aa2.55□□□□□ -2
HMGB3P9-201ENST00000441799 UNQ6190/PRO20217Q6UXQ8 127 aa2.55□□□□□ -2
HMGB3P9-201ENST00000441799 Q6ZRX8 168 aa2.55□□□□□ -2
HMGB3P9-201ENST00000441799 WFDC13Q8IUB5 93 aa2.55□□□□□ -2
HMGB3P9-201ENST00000441799 C6orf48Q9UBA6 75 aa2.55□□□□□ -2
HMGB3P9-201ENST00000441799 STARD9Q9P2P6 4700 aa2.55□□□□□ -2
HMGB3P9-201ENST00000441799 GVQW2A0A096LPI5 108 aaPredicted RBP2.54□□□□□ -2
HMGB3P9-201ENST00000441799 DEFB4AO15263 64 aa2.54□□□□□ -2
HMGB3P9-201ENST00000441799 KRTAP5-8O75690 187 aa2.54□□□□□ -2
HMGB3P9-201ENST00000441799 STAB2Q8WWQ8 2551 aa2.52□□□□□ -2.01
HMGB3P9-201ENST00000441799 WFDC10BQ8IUB3 73 aa2.52□□□□□ -2.01
HMGB3P9-201ENST00000441799 PLAC4Q8WY50 150 aa2.52□□□□□ -2.01
HMGB3P9-201ENST00000441799 HUWE1Q7Z6Z7 4374 aaKnown RBP2.51□□□□□ -2.01
HMGB3P9-201ENST00000441799 DEFB105AQ8NG35 78 aa2.51□□□□□ -2.01
HMGB3P9-201ENST00000441799 H0YAA0 97 aa2.5□□□□□ -2.01
HMGB3P9-201ENST00000441799 H3BNG1 76 aa2.5□□□□□ -2.01
HMGB3P9-201ENST00000441799 COX6B2Q6YFQ2 88 aa2.5□□□□□ -2.01
HMGB3P9-201ENST00000441799 DYNC1H1Q14204 4646 aaKnown RBP2.49□□□□□ -2.01
HMGB3P9-201ENST00000441799 MMP24-AS1A0A0U1RRL7 71 aa2.48□□□□□ -2.01
HMGB3P9-201ENST00000441799 LINC01556Q5JQF7 62 aa2.48□□□□□ -2.01
HMGB3P9-201ENST00000441799 Q6ZRN7 208 aaPredicted RBP2.47□□□□□ -2.01
HMGB3P9-201ENST00000441799 MRPL34Q9BQ48 92 aaKnown RBP2.47□□□□□ -2.01
HMGB3P9-201ENST00000441799 CRIPTQ9P021 101 aa2.47□□□□□ -2.01
HMGB3P9-201ENST00000441799 DNAH11Q96DT5 4516 aa2.46□□□□□ -2.02
HMGB3P9-201ENST00000441799 Q6ZSA8 131 aa2.45□□□□□ -2.02
HMGB3P9-201ENST00000441799 HMCN2Q8NDA2 5059 aa2.45□□□□□ -2.02
HMGB3P9-201ENST00000441799 PKHD1P08F94 4074 aa2.44□□□□□ -2.02
HMGB3P9-201ENST00000441799 VPS13DQ5THJ4 4388 aa2.44□□□□□ -2.02
HMGB3P9-201ENST00000441799 LCE1CQ5T751 118 aa2.44□□□□□ -2.02
HMGB3P9-201ENST00000441799 LCE1BQ5T7P3 118 aa2.44□□□□□ -2.02
HMGB3P9-201ENST00000441799 IGFL1Q6UW32 110 aa2.44□□□□□ -2.02
HMGB3P9-201ENST00000441799 UBE2DNLQ8IWF7 75 aa2.44□□□□□ -2.02
HMGB3P9-201ENST00000441799 FAT2Q9NYQ8 4349 aa2.44□□□□□ -2.02
HMGB3P9-201ENST00000441799 DNAH2Q9P225 4427 aa2.43□□□□□ -2.02
HMGB3P9-201ENST00000441799 HSPG2P98160 4391 aa2.43□□□□□ -2.02
HMGB3P9-201ENST00000441799 KMT2AQ03164 3969 aa2.42□□□□□ -2.02
HMGB3P9-201ENST00000441799 DNAH17Q9UFH2 4485 aa2.41□□□□□ -2.02
HMGB3P9-201ENST00000441799 KRTAP10-1P60331 282 aa2.41□□□□□ -2.02
HMGB3P9-201ENST00000441799 RNF213Q63HN8 5207 aa2.41□□□□□ -2.02
HMGB3P9-201ENST00000441799 K7EIL1 84 aa2.4□□□□□ -2.03
HMGB3P9-201ENST00000441799 SPRR1AP35321 89 aa2.4□□□□□ -2.03
HMGB3P9-201ENST00000441799 H1FX-AS1Q4G0G2 97 aa2.4□□□□□ -2.03
HMGB3P9-201ENST00000441799 APOBP04114 4563 aaKnown RBP2.39□□□□□ -2.03
HMGB3P9-201ENST00000441799 PKD1P98161 4303 aa2.38□□□□□ -2.03
HMGB3P9-201ENST00000441799 MYCBP2O75592 4640 aa2.38□□□□□ -2.03
HMGB3P9-201ENST00000441799 PRLHP81277 87 aa2.38□□□□□ -2.03
HMGB3P9-201ENST00000441799 RPL37P61927 97 aaKnown RBP2.37□□□□□ -2.03
HMGB3P9-201ENST00000441799 DNAH5Q8TE73 4624 aa2.36□□□□□ -2.03
HMGB3P9-201ENST00000441799 A0A096LNI7 61 aa2.36□□□□□ -2.03
HMGB3P9-201ENST00000441799 KRTAP1-4P0C5Y4 121 aa2.36□□□□□ -2.03
HMGB3P9-201ENST00000441799 C10orf95Q9H7T3 257 aa2.36□□□□□ -2.03
HMGB3P9-201ENST00000441799 DNAH6Q9C0G6 4158 aa2.36□□□□□ -2.03
HMGB3P9-201ENST00000441799 SRRM2Q9UQ35 2752 aaKnown RBP2.36□□□□□ -2.03
HMGB3P9-201ENST00000441799 LRP1BQ9NZR2 4599 aa2.35□□□□□ -2.03
HMGB3P9-201ENST00000441799 PP632Q6XCG6 107 aa2.35□□□□□ -2.03
HMGB3P9-201ENST00000441799 SPRR1BP22528 89 aa2.33□□□□□ -2.04
HMGB3P9-201ENST00000441799 FAT4Q6V0I7 4981 aa2.33□□□□□ -2.04
HMGB3P9-201ENST00000441799 MUC2Q02817 5179 aa2.33□□□□□ -2.04
HMGB3P9-201ENST00000441799 FAT1Q14517 4588 aa2.32□□□□□ -2.04
HMGB3P9-201ENST00000441799 FLG2Q5D862 2391 aaPredicted RBP2.31□□□□□ -2.04
HMGB3P9-201ENST00000441799 DMBT1Q9UGM3 2413 aaPredicted RBP2.31□□□□□ -2.04
HMGB3P9-201ENST00000441799 APLNQ9ULZ1 77 aa2.3□□□□□ -2.04
HMGB3P9-201ENST00000441799 FSIP2Q5CZC0 6907 aa2.3□□□□□ -2.04
HMGB3P9-201ENST00000441799 VPS13BQ7Z7G8 4022 aa2.29□□□□□ -2.04
HMGB3P9-201ENST00000441799 SPINK6Q6UWN8 80 aa2.28□□□□□ -2.04
HMGB3P9-201ENST00000441799 SPRR5A0A1B0GTR4 108 aa2.27□□□□□ -2.05
HMGB3P9-201ENST00000441799 KRTAP13-2Q52LG2 175 aa2.26□□□□□ -2.05
HMGB3P9-201ENST00000441799 KRTAP13-1Q8IUC0 172 aa2.25□□□□□ -2.05
HMGB3P9-201ENST00000441799 LRP2P98164 4655 aa2.24□□□□□ -2.05
HMGB3P9-201ENST00000441799 PKHD1L1Q86WI1 4243 aa2.2□□□□□ -2.06
HMGB3P9-201ENST00000441799 FAT3Q8TDW7 4589 aa2.2□□□□□ -2.06
HMGB3P9-201ENST00000441799 S4R3F8 94 aa2.19□□□□□ -2.06
HMGB3P9-201ENST00000441799 LRP1Q07954 4544 aaKnown RBP2.19□□□□□ -2.06
HMGB3P9-201ENST00000441799 SPINK1P00995 79 aa2.15□□□□□ -2.07
HMGB3P9-201ENST00000441799 TNXBP22105 4242 aa2.14□□□□□ -2.07
HMGB3P9-201ENST00000441799 DNAH8Q96JB1 4490 aa2.13□□□□□ -2.07
HMGB3P9-201ENST00000441799 Q5VSD8 79 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms