RNA–Protein interactions for RNA: ENST00000441214.1

LINC01271-201, Transcript of long intergenic non-protein coding RNA 1271, humanhuman

TSL 1 (best) BASIC

Gene LINC01271, Length 2,250 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01271-201ENST00000441214 KRTAP10-4P60372 401 aaPredicted RBP7.7□□□□□ -1.18
LINC01271-201ENST00000441214 FLG2Q5D862 2391 aaPredicted RBP7.7□□□□□ -1.18
LINC01271-201ENST00000441214 Q5VSD8 79 aa7.69□□□□□ -1.18
LINC01271-201ENST00000441214 TPRXLQ17RH7 258 aa7.68□□□□□ -1.18
LINC01271-201ENST00000441214 SPINK1P00995 79 aa7.66□□□□□ -1.18
LINC01271-201ENST00000441214 LRP1Q07954 4544 aaKnown RBP7.64□□□□□ -1.19
LINC01271-201ENST00000441214 SPINK6Q6UWN8 80 aa7.64□□□□□ -1.19
LINC01271-201ENST00000441214 MYCBP2O75592 4640 aa7.64□□□□□ -1.19
LINC01271-201ENST00000441214 KRTAP1-4P0C5Y4 121 aa7.63□□□□□ -1.19
LINC01271-201ENST00000441214 KRTAP4-5Q9BYR2 181 aa7.61□□□□□ -1.19
LINC01271-201ENST00000441214 KRTAP13-2Q52LG2 175 aa7.6□□□□□ -1.19
LINC01271-201ENST00000441214 PKHD1L1Q86WI1 4243 aa7.58□□□□□ -1.2
LINC01271-201ENST00000441214 TYMSOSQ8TAI1 123 aa7.58□□□□□ -1.2
LINC01271-201ENST00000441214 Q8N1X5 172 aa7.57□□□□□ -1.2
LINC01271-201ENST00000441214 ABCA13Q86UQ4 5058 aa7.56□□□□□ -1.2
LINC01271-201ENST00000441214 RPL37P61927 97 aaKnown RBP7.5□□□□□ -1.21
LINC01271-201ENST00000441214 COX6B2Q6YFQ2 88 aa7.49□□□□□ -1.21
LINC01271-201ENST00000441214 HERC2O95714 4834 aa7.48□□□□□ -1.21
LINC01271-201ENST00000441214 FAT3Q8TDW7 4589 aa7.47□□□□□ -1.21
LINC01271-201ENST00000441214 TNXBP22105 4242 aa7.46□□□□□ -1.22
LINC01271-201ENST00000441214 DMBT1Q9UGM3 2413 aaPredicted RBP7.46□□□□□ -1.22
LINC01271-201ENST00000441214 PCLOQ9Y6V0 5065 aa7.45□□□□□ -1.22
LINC01271-201ENST00000441214 C10orf95Q9H7T3 257 aa7.43□□□□□ -1.22
LINC01271-201ENST00000441214 KRTAP10-8P60410 259 aa7.35□□□□□ -1.23
LINC01271-201ENST00000441214 MT1HL1P0DM35 61 aa7.35□□□□□ -1.23
LINC01271-201ENST00000441214 J3QL48 77 aa7.25□□□□□ -1.25
LINC01271-201ENST00000441214 CAMK2N1Q7Z7J9 78 aa7.24□□□□□ -1.25
LINC01271-201ENST00000441214 HERC1Q15751 4861 aa7.21□□□□□ -1.26
LINC01271-201ENST00000441214 KRTAP3-1Q9BYR8 98 aa7.2□□□□□ -1.26
LINC01271-201ENST00000441214 C9orf92A6NGG3 77 aa7.18□□□□□ -1.26
LINC01271-201ENST00000441214 XP32Q5T750 250 aa7.18□□□□□ -1.26
LINC01271-201ENST00000441214 RPS29P62273 56 aaKnown RBP7.17□□□□□ -1.26
LINC01271-201ENST00000441214 S4R3F8 94 aa7.15□□□□□ -1.26
LINC01271-201ENST00000441214 LPAP08519 4548 aa7.15□□□□□ -1.27
LINC01271-201ENST00000441214 A0A0D9SG42 100 aa7.15□□□□□ -1.27
LINC01271-201ENST00000441214 KRTAP3-2Q9BYR7 98 aa7.13□□□□□ -1.27
LINC01271-201ENST00000441214 KRTAP10-6P60371 365 aaPredicted RBP7.12□□□□□ -1.27
LINC01271-201ENST00000441214 KRTAP13-4Q3LI77 160 aa7.12□□□□□ -1.27
LINC01271-201ENST00000441214 PLAC4Q8WY50 150 aa7.12□□□□□ -1.27
LINC01271-201ENST00000441214 LRP2P98164 4655 aa7.04□□□□□ -1.28
LINC01271-201ENST00000441214 KRTAP12-2P59991 146 aa7□□□□□ -1.29
LINC01271-201ENST00000441214 HMCN2Q8NDA2 5059 aa6.95□□□□□ -1.3
LINC01271-201ENST00000441214 KRTAP12-1P59990 96 aa6.93□□□□□ -1.3
LINC01271-201ENST00000441214 PRO2289Q9P1D8 64 aa6.89□□□□□ -1.31
LINC01271-201ENST00000441214 MUC2Q02817 5179 aa6.87□□□□□ -1.31
LINC01271-201ENST00000441214 UBR4Q5T4S7 5183 aa6.85□□□□□ -1.31
LINC01271-201ENST00000441214 KRTAP3-3Q9BYR6 98 aa6.84□□□□□ -1.31
LINC01271-201ENST00000441214 RNF213Q63HN8 5207 aa6.81□□□□□ -1.32
LINC01271-201ENST00000441214 M0QZ58 72 aa6.73□□□□□ -1.33
LINC01271-201ENST00000441214 KRTAP4-1Q9BYQ7 146 aa6.69□□□□□ -1.34
LINC01271-201ENST00000441214 PP632Q6XCG6 107 aa6.67□□□□□ -1.34
LINC01271-201ENST00000441214 MUC17Q685J3 4493 aa6.63□□□□□ -1.35
LINC01271-201ENST00000441214 INE1O15225 51 aa6.61□□□□□ -1.35
LINC01271-201ENST00000441214 R4GN34 69 aa6.55□□□□□ -1.36
LINC01271-201ENST00000441214 SPRR5A0A1B0GTR4 108 aa6.53□□□□□ -1.36
LINC01271-201ENST00000441214 FAT4Q6V0I7 4981 aa6.53□□□□□ -1.36
LINC01271-201ENST00000441214 KRTAP19-2Q3LHN2 52 aa6.38□□□□□ -1.39
LINC01271-201ENST00000441214 FLGP20930 4061 aaPredicted RBP6.32□□□□□ -1.4
LINC01271-201ENST00000441214 LCE2CQ5TA81 110 aa6.32□□□□□ -1.4
LINC01271-201ENST00000441214 KRTAP23-1A1A580 65 aa6.27□□□□□ -1.41
LINC01271-201ENST00000441214 M0R2T5 61 aa6.22□□□□□ -1.41
LINC01271-201ENST00000441214 MT1HP80294 61 aa6.21□□□□□ -1.42
LINC01271-201ENST00000441214 LCE2AQ5TA79 106 aaPredicted RBP6.01□□□□□ -1.45
LINC01271-201ENST00000441214 TNP1P09430 55 aa6□□□□□ -1.45
LINC01271-201ENST00000441214 LORP23490 312 aaPredicted RBP5.99□□□□□ -1.45
LINC01271-201ENST00000441214 KRTAP9-8Q9BYQ0 159 aa5.95□□□□□ -1.46
LINC01271-201ENST00000441214 MT2AP02795 61 aa5.94□□□□□ -1.46
LINC01271-201ENST00000441214 MT1FP04733 61 aa5.93□□□□□ -1.46
LINC01271-201ENST00000441214 KRTAP10-10P60014 251 aa5.92□□□□□ -1.46
LINC01271-201ENST00000441214 KRTAP9-2Q9BYQ4 174 aa5.91□□□□□ -1.46
LINC01271-201ENST00000441214 USH2AO75445 5202 aa5.78□□□□□ -1.48
LINC01271-201ENST00000441214 FSIP2Q5CZC0 6907 aa5.77□□□□□ -1.49
LINC01271-201ENST00000441214 KRTAP19-1Q8IUB9 90 aa5.74□□□□□ -1.49
LINC01271-201ENST00000441214 KRTAP9-6A0A140TA67 174 aa5.73□□□□□ -1.49
LINC01271-201ENST00000441214 KRTAP9-3Q9BYQ3 159 aa5.72□□□□□ -1.49
LINC01271-201ENST00000441214 SPRR2GQ9BYE4 73 aa5.67□□□□□ -1.5
LINC01271-201ENST00000441214 LCE2BO14633 110 aa5.65□□□□□ -1.51
LINC01271-201ENST00000441214 LCE2DQ5TA82 110 aaPredicted RBP5.59□□□□□ -1.51
LINC01271-201ENST00000441214 MT1BP07438 61 aa5.54□□□□□ -1.52
LINC01271-201ENST00000441214 CRCT1Q9UGL9 99 aa5.54□□□□□ -1.52
LINC01271-201ENST00000441214 KRTAP19-8Q3LI54 63 aa5.51□□□□□ -1.53
LINC01271-201ENST00000441214 SSPOA2VEC9 5147 aa5.5□□□□□ -1.53
LINC01271-201ENST00000441214 LCE3AQ5TA76 89 aa5.46□□□□□ -1.54
LINC01271-201ENST00000441214 KRTAP8-1Q8IUC2 63 aa5.43□□□□□ -1.54
LINC01271-201ENST00000441214 KRTAP10-12P60413 245 aa5.37□□□□□ -1.55
LINC01271-201ENST00000441214 MT1XP80297 61 aa5.35□□□□□ -1.55
LINC01271-201ENST00000441214 KRTAP10-5P60370 271 aa5.33□□□□□ -1.56
LINC01271-201ENST00000441214 KMT2DO14686 5537 aa5.31□□□□□ -1.56
LINC01271-201ENST00000441214 FCGBPQ9Y6R7 5405 aaPredicted RBP5.3□□□□□ -1.56
LINC01271-201ENST00000441214 KRTAP19-6Q3LI70 58 aa5.21□□□□□ -1.58
LINC01271-201ENST00000441214 KRTAP12-3P60328 96 aa5.2□□□□□ -1.58
LINC01271-201ENST00000441214 KRTAP10-7P60409 375 aaPredicted RBP5.18□□□□□ -1.58
LINC01271-201ENST00000441214 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.17□□□□□ -1.58
LINC01271-201ENST00000441214 KRTAP9-7A8MTY7 169 aa5.15□□□□□ -1.58
LINC01271-201ENST00000441214 MACF1Q9UPN3 7388 aaKnown RBP5.12□□□□□ -1.59
LINC01271-201ENST00000441214 KRTAP2-3P0C7H8 128 aa5.08□□□□□ -1.6
LINC01271-201ENST00000441214 KRTAP2-4Q9BYR9 128 aa5.08□□□□□ -1.6
LINC01271-201ENST00000441214 KRTAP2-1Q9BYU5 128 aa5.08□□□□□ -1.6
LINC01271-201ENST00000441214 KRTAP4-8A0A0G2JLE6 195 aa5.07□□□□□ -1.6
LINC01271-201ENST00000441214 KRTAP4-8Q9BYQ9 185 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms