RNA–Protein interactions for RNA: ENST00000440705.6

VRK2-207, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK2, Length 1,676 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-207ENST00000440705 MUC2Q02817 5179 aa10.01□□□□□ -0.81
VRK2-207ENST00000440705 LCA10Q71F78 164 aa10□□□□□ -0.81
VRK2-207ENST00000440705 UBR4Q5T4S7 5183 aa9.98□□□□□ -0.81
VRK2-207ENST00000440705 KRTAP3-3Q9BYR6 98 aa9.94□□□□□ -0.82
VRK2-207ENST00000440705 V9GYY9 64 aa9.93□□□□□ -0.82
VRK2-207ENST00000440705 Q1T7F1 81 aa9.92□□□□□ -0.82
VRK2-207ENST00000440705 RNF213Q63HN8 5207 aa9.92□□□□□ -0.82
VRK2-207ENST00000440705 LINC01558Q9Y6Z2 57 aa9.87□□□□□ -0.83
VRK2-207ENST00000440705 CSAG1Q6PB30 78 aa9.86□□□□□ -0.83
VRK2-207ENST00000440705 LCE2CQ5TA81 110 aa9.82□□□□□ -0.84
VRK2-207ENST00000440705 SEC61GP60059 68 aa9.76□□□□□ -0.85
VRK2-207ENST00000440705 A0A1B0GU69 56 aa9.75□□□□□ -0.85
VRK2-207ENST00000440705 PRR15LQ9BU68 103 aa9.74□□□□□ -0.85
VRK2-207ENST00000440705 FLGP20930 4061 aaPredicted RBP9.73□□□□□ -0.85
VRK2-207ENST00000440705 PSPHP1O15172 72 aa9.72□□□□□ -0.85
VRK2-207ENST00000440705 KRTAP3-2Q9BYR7 98 aa9.71□□□□□ -0.85
VRK2-207ENST00000440705 MT1HP80294 61 aa9.64□□□□□ -0.87
VRK2-207ENST00000440705 H0YAA0 97 aa9.63□□□□□ -0.87
VRK2-207ENST00000440705 Q5VV11 94 aa9.63□□□□□ -0.87
VRK2-207ENST00000440705 M0R2T5 61 aa9.59□□□□□ -0.87
VRK2-207ENST00000440705 FAT4Q6V0I7 4981 aa9.58□□□□□ -0.88
VRK2-207ENST00000440705 ADM2Q7Z4H4 148 aa9.58□□□□□ -0.88
VRK2-207ENST00000440705 KRTAP10-6P60371 365 aaPredicted RBP9.55□□□□□ -0.88
VRK2-207ENST00000440705 P0C880 135 aa9.49□□□□□ -0.89
VRK2-207ENST00000440705 A0A1B0GU33 70 aa9.48□□□□□ -0.89
VRK2-207ENST00000440705 A6NED7 52 aa9.45□□□□□ -0.9
VRK2-207ENST00000440705 UQCR11O14957 56 aa9.45□□□□□ -0.9
VRK2-207ENST00000440705 LCE2AQ5TA79 106 aaPredicted RBP9.32□□□□□ -0.92
VRK2-207ENST00000440705 MIR22HGQ0VDD5 57 aa9.32□□□□□ -0.92
VRK2-207ENST00000440705 M0QZ58 72 aa9.31□□□□□ -0.92
VRK2-207ENST00000440705 SPATA8Q6RVD6 105 aa9.29□□□□□ -0.92
VRK2-207ENST00000440705 KRTAP9-8Q9BYQ0 159 aa9.28□□□□□ -0.92
VRK2-207ENST00000440705 R4GN34 69 aa9.27□□□□□ -0.93
VRK2-207ENST00000440705 BRK1Q8WUW1 75 aa9.26□□□□□ -0.93
VRK2-207ENST00000440705 CDC42SE1Q9NRR8 79 aa9.26□□□□□ -0.93
VRK2-207ENST00000440705 LORP23490 312 aaPredicted RBP9.26□□□□□ -0.93
VRK2-207ENST00000440705 KRTAP13-4Q3LI77 160 aa9.26□□□□□ -0.93
VRK2-207ENST00000440705 CRIPTQ9P021 101 aa9.26□□□□□ -0.93
VRK2-207ENST00000440705 MT2AP02795 61 aa9.24□□□□□ -0.93
VRK2-207ENST00000440705 KRTAP10-10P60014 251 aa9.2□□□□□ -0.94
VRK2-207ENST00000440705 MT1FP04733 61 aa9.18□□□□□ -0.94
VRK2-207ENST00000440705 A8MU10 97 aa9.14□□□□□ -0.95
VRK2-207ENST00000440705 A0A0D9SG42 100 aa9.1□□□□□ -0.95
VRK2-207ENST00000440705 LINC01554Q52M75 96 aa9.07□□□□□ -0.96
VRK2-207ENST00000440705 SPRR2GQ9BYE4 73 aa9.04□□□□□ -0.96
VRK2-207ENST00000440705 PRO0628Q9UI54 55 aa9.03□□□□□ -0.96
VRK2-207ENST00000440705 KRTAP19-1Q8IUB9 90 aa9□□□□□ -0.97
VRK2-207ENST00000440705 K7ERS5 55 aa8.96□□□□□ -0.98
VRK2-207ENST00000440705 KRTAP9-3Q9BYQ3 159 aa8.95□□□□□ -0.98
VRK2-207ENST00000440705 A6NN06 94 aa8.94□□□□□ -0.98
VRK2-207ENST00000440705 KRTAP12-1P59990 96 aa8.92□□□□□ -0.98
VRK2-207ENST00000440705 SPINT4Q6UDR6 99 aa8.91□□□□□ -0.98
VRK2-207ENST00000440705 KRTAP12-2P59991 146 aa8.89□□□□□ -0.99
VRK2-207ENST00000440705 KRTAP19-8Q3LI54 63 aa8.81□□□□□ -1
VRK2-207ENST00000440705 PMAIP1Q13794 54 aa8.78□□□□□ -1
VRK2-207ENST00000440705 PLAC4Q8WY50 150 aa8.76□□□□□ -1.01
VRK2-207ENST00000440705 LCE2BO14633 110 aa8.7□□□□□ -1.02
VRK2-207ENST00000440705 CAMK2N1Q7Z7J9 78 aa8.68□□□□□ -1.02
VRK2-207ENST00000440705 MT1BP07438 61 aa8.67□□□□□ -1.02
VRK2-207ENST00000440705 ROMO1P60602 79 aa8.53□□□□□ -1.04
VRK2-207ENST00000440705 C10orf95Q9H7T3 257 aa8.44□□□□□ -1.06
VRK2-207ENST00000440705 USH2AO75445 5202 aa8.41□□□□□ -1.06
VRK2-207ENST00000440705 MT1XP80297 61 aa8.38□□□□□ -1.07
VRK2-207ENST00000440705 PRO2289Q9P1D8 64 aa8.37□□□□□ -1.07
VRK2-207ENST00000440705 KRTAP10-5P60370 271 aa8.37□□□□□ -1.07
VRK2-207ENST00000440705 KTN1-AS1Q86SY8 53 aa8.37□□□□□ -1.07
VRK2-207ENST00000440705 TNP1P09430 55 aa8.25□□□□□ -1.09
VRK2-207ENST00000440705 KRTAP25-1Q3LHN0 102 aa8.25□□□□□ -1.09
VRK2-207ENST00000440705 KRTAP19-6Q3LI70 58 aa8.21□□□□□ -1.09
VRK2-207ENST00000440705 KRTAP9-2Q9BYQ4 174 aa8.21□□□□□ -1.09
VRK2-207ENST00000440705 PRAC1Q96KF2 57 aa8.18□□□□□ -1.1
VRK2-207ENST00000440705 SSPOA2VEC9 5147 aa8.15□□□□□ -1.11
VRK2-207ENST00000440705 FSIP2Q5CZC0 6907 aa8.13□□□□□ -1.11
VRK2-207ENST00000440705 KRTAP10-7P60409 375 aaPredicted RBP8.03□□□□□ -1.12
VRK2-207ENST00000440705 KRTAP23-1A1A580 65 aa7.99□□□□□ -1.13
VRK2-207ENST00000440705 SVIPQ8NHG7 77 aa7.98□□□□□ -1.13
VRK2-207ENST00000440705 PP632Q6XCG6 107 aa7.98□□□□□ -1.13
VRK2-207ENST00000440705 KRTAP10-12P60413 245 aa7.96□□□□□ -1.13
VRK2-207ENST00000440705 CRCT1Q9UGL9 99 aa7.93□□□□□ -1.14
VRK2-207ENST00000440705 LCE3AQ5TA76 89 aa7.86□□□□□ -1.15
VRK2-207ENST00000440705 FCGBPQ9Y6R7 5405 aaPredicted RBP7.84□□□□□ -1.15
VRK2-207ENST00000440705 KRTAP4-8A0A0G2JLE6 195 aa7.73□□□□□ -1.17
VRK2-207ENST00000440705 KRTAP8-1Q8IUC2 63 aa7.73□□□□□ -1.17
VRK2-207ENST00000440705 KRTAP4-8Q9BYQ9 185 aa7.73□□□□□ -1.17
VRK2-207ENST00000440705 LOC100996750A0A140TA64 210 aa7.71□□□□□ -1.18
VRK2-207ENST00000440705 KRTAP4-6Q9BYQ5 205 aa7.71□□□□□ -1.18
VRK2-207ENST00000440705 KMT2DO14686 5537 aa7.64□□□□□ -1.19
VRK2-207ENST00000440705 KRTAP9-6A0A140TA67 174 aa7.6□□□□□ -1.19
VRK2-207ENST00000440705 KRTAP12-3P60328 96 aa7.58□□□□□ -1.2
VRK2-207ENST00000440705 KRTAP19-5Q3LI72 72 aa7.55□□□□□ -1.2
VRK2-207ENST00000440705 KRTAP19-7Q3SYF9 63 aa7.47□□□□□ -1.21
VRK2-207ENST00000440705 MACF1Q9UPN3 7388 aaKnown RBP7.46□□□□□ -1.22
VRK2-207ENST00000440705 KRTAP15-1Q3LI76 137 aa7.42□□□□□ -1.22
VRK2-207ENST00000440705 MT1EP04732 61 aa7.35□□□□□ -1.23
VRK2-207ENST00000440705 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.32□□□□□ -1.24
VRK2-207ENST00000440705 SPRR2FQ96RM1 72 aa7.28□□□□□ -1.24
VRK2-207ENST00000440705 KRTAP5-9P26371 169 aa7.24□□□□□ -1.25
VRK2-207ENST00000440705 SYNE2Q8WXH0 6885 aaKnown RBP7.22□□□□□ -1.25
VRK2-207ENST00000440705 MT1LQ93083 61 aa7.19□□□□□ -1.26
VRK2-207ENST00000440705 KRTAP19-4Q3LI73 84 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms